Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco01g1247 ATGAAGATATCTAATTCCATCTTTATTTTATTTTCATTATTCCTTTTGTTAATATCACCTGCCACTGCTGCTAAAAAGTCATATGTTGTGATATTGGGATCCCATTCACATGGGTTAGAAGTTACTGAGGAAGATCTTGAAAGGGTGGTTCATTCCCATCACAAATTGCTTGGATCCTTCTTGGGCAGTAATGAGAAGGCAAAAGAGGCCATATTTTACTCCTATAAGAAGCATATTAACGGCTTTGCAGCCATTCTGTACGAGGAAGACGCAACCCAACTTGCAAATCATCCCGAGGTAGCAGCTGTATTGCCAAACAGAGCAAAAGAATTACACACAACACATTCATGGGAATTTATGCATTTGGAGAAGAATGGGGTGATTCCTCCTTCTTCTCCTTGGCACAGGGCTAAATCTGGAAAAGATGTCATTATTGCCAACCTTGACACTGGTGTATGGCCAGAGTCCAAGAGTTTTGGAGAACATGGCATAGTTGGACCTGTTCCATCAAAGTGGAAAGGAGGTTGTACTGATAAAACCCCTGATCGAGTGCCTTGTAATAGGAAATTAATCGGAGCAAAGTACTTCAACAAGGGATTCCTGGCCTACTTGAAATCTGAAAATTATACGGACCTCTCATCTGTCATCAACTCCACTCGCGACTACGAAGGTCATGGGTCTCACACCTTGTCCACGGCCGGGGGCAGCTATGTGTCTGGTGCCAGCGTGTTTGGGTCGGGTGTCGGAACTGCCAAAGGTGGATCTCCCAAGGCTCGCGTTGCTGCCTACAAGGTCTGCTGGCCACTTGAGGGTGGTGGGTGCTTCGATGCCGACATCGCCGAGGCATTTGACCATGCCATCGATGATGGTGTCGATGTTCTTTCACTCTCCCTCGGCGGCGATCCAGCCGATTACTTTGGCGATTCCATTGCCATTGCCTCTTTCCATGCAATGAAGAAGGGTATCCCTGTGGTGTGCTCTGCCGGCAACTCCGGCCCTGATGCCTGGACTGTTTCTAATACTGCACCTTGGATTTTGACGGTTGCTGCAAGTACTTTAGACCGTGAGTTTCAGGCTCCTGTTGAGCTCCAAAATGGCCATCGTTACATGGGTTCGAGCCTTTCGAAAGCATTGAGAGAAAAGAAGTTGTACCCATTAATTACGGGAGCTCAGGCGAAAACAAAGAATGCCACAGCGGATGAGGCCATGCTTTGCAAGCCGGAAACATTGGATCATTCAAAAGTAAAAGGGAAGATACTGGCTTGCTTGAGAGGAGACAATGCAAGAGTGGACAAAGGAGAACAAGCTGCTCTTGCCGGTGCTGCCGGAATGATTCTATGCAACGATATGCTTAGTGGATTTGAAACCATTGCTGATCCCCATGTTCTTCCAGCTTCCCATATCAATTACAATGACGGCCAAGCTGTTCTCTCTTACATCAATTCCACCAAAAATCCAATGGGTTATTTAATCCCACCATCGGCTAAAGTTAAGACCAAGCCTGCTCCCTCTATGGCGGCCTTCTCATCTCGAGGACCCAACTTTATTTCACCCGAGATTATCAAGCCGGATGTGACTGCACCTGGCGTAAACATAATCGCCGCATTCTCAGAAGCCGTAAGCCCAACAGGTGAGGCATTCGACAATAGAACGGCTCCATTCATAACAATGTCAGGCACCTCCATGTCTTGCCCCCACGTGGCAGGCCTCGTTGGCCTCCTTCGAACTCTCCACCCTCACTGGAGCCCTTCTGCCATCAAATCTGCCATCATGACCTCTGCCAGGGTTCTTGACAACACAATGAAACCCATGCTTGACGGTGGCTCCCCTGACCTCGCCCCTGCCACCCCCTTCGCCTACGGCTCCGGCCACATTCGCCCCGTGGGAGCCATCGACCCTGGCCTCGTCTATGACCTCTCACCCAACGACTACTTGGAATTCCTCTGCGCTAGCGGGTACGATGAGAAGAGCATTCGGGCATTCTCTGACGGCCCTTTCAACTGCCCTGCCTCTGCTTCTATTTTGAACTTCAATTACCCCTCCATTGGGGTTCAGAATTTGAATGGAAGTGTCACCCTCACTAGGAGGCTGAAGAACGTTGGCACTCCTGGGGTTTACAGACCCAAAATTCTCCACCCGGATGGAGTTAAAGTTTCAGTGAAGCCTAGAGTTCTCAAGTTTGAGAGAGTTGCAGAGGAGAAGAGCTTTGAATTGACCATCACCGGAGCTGTGCCAGAGAATCAGGTTGTTAACGGCGTGTTGATTTGGACGGACGGCAAGCACTTTGTTAGAAGTCCCATTCTCGTTTCTTCTAACTTGTTCTGA 2325 48.77 MKISNSIFILFSLFLLLISPATAAKKSYVVILGSHSHGLEVTEEDLERVVHSHHKLLGSFLGSNEKAKEAIFYSYKKHINGFAAILYEEDATQLANHPEVAAVLPNRAKELHTTHSWEFMHLEKNGVIPPSSPWHRAKSGKDVIIANLDTGVWPESKSFGEHGIVGPVPSKWKGGCTDKTPDRVPCNRKLIGAKYFNKGFLAYLKSENYTDLSSVINSTRDYEGHGSHTLSTAGGSYVSGASVFGSGVGTAKGGSPKARVAAYKVCWPLEGGGCFDADIAEAFDHAIDDGVDVLSLSLGGDPADYFGDSIAIASFHAMKKGIPVVCSAGNSGPDAWTVSNTAPWILTVAASTLDREFQAPVELQNGHRYMGSSLSKALREKKLYPLITGAQAKTKNATADEAMLCKPETLDHSKVKGKILACLRGDNARVDKGEQAALAGAAGMILCNDMLSGFETIADPHVLPASHINYNDGQAVLSYINSTKNPMGYLIPPSAKVKTKPAPSMAAFSSRGPNFISPEIIKPDVTAPGVNIIAAFSEAVSPTGEAFDNRTAPFITMSGTSMSCPHVAGLVGLLRTLHPHWSPSAIKSAIMTSARVLDNTMKPMLDGGSPDLAPATPFAYGSGHIRPVGAIDPGLVYDLSPNDYLEFLCASGYDEKSIRAFSDGPFNCPASASILNFNYPSIGVQNLNGSVTLTRRLKNVGTPGVYRPKILHPDGVKVSVKPRVLKFERVAEEKSFELTITGAVPENQVVNGVLIWTDGKHFVRSPILVSSNLF 774
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 19197219 19201257 + CcPI632755_01g012470.1 Cco01g1247 170109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco01g1247 774 Pfam Peptidase inhibitor I9 27 112 IPR010259 -
Cco01g1247 774 Pfam PA domain 401 475 IPR003137 -
Cco01g1247 774 ProSitePatterns Serine proteases, subtilase family, serine active site. 559 569 IPR023828 -
Cco01g1247 774 FunFam Subtilisin-like protease SBT5.3 17 112 - -
Cco01g1247 774 SUPERFAMILY PA domain 412 483 IPR046450 -
Cco01g1247 774 FunFam Subtilisin-like protease SBT1.5 648 772 - -
Cco01g1247 774 Gene3D - 648 772 - -
Cco01g1247 774 ProSiteProfiles Serine proteases, subtilase domain profile. 116 631 - -
Cco01g1247 774 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 112 IPR037045 -
Cco01g1247 774 SUPERFAMILY Subtilisin-like 111 635 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cco01g1247 774 Pfam Fibronectin type-III domain 676 769 IPR041469 -
Cco01g1247 774 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 54 767 IPR045051 -
Cco01g1247 774 CDD Peptidases_S8_3 109 594 IPR034197 -
Cco01g1247 774 CDD PA_subtilisin_like 361 490 - -
Cco01g1247 774 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Cco01g1247 774 PRINTS Subtilisin serine protease family (S8) signature 221 234 IPR015500 -
Cco01g1247 774 PRINTS Subtilisin serine protease family (S8) signature 558 574 IPR015500 -
Cco01g1247 774 Gene3D Peptidase S8/S53 domain 142 644 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cco01g1247 774 Gene3D - 354 498 - -
Cco01g1247 774 Pfam Subtilase family 140 600 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cco01g1247 774 FunFam subtilisin-like protease SBT1.5 354 497 - -
Cco01g1247 774 FunFam Subtilisin-like protease SBT1.5 142 367 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco01g1247 Cco-Chr1:19197219 Cco02g0322 Cco-Chr2:2939845 3.80E-245 dispersed
Cco01g1244 Cco-Chr1:19124208 Cco01g1247 Cco-Chr1:19197219 5.90E-292 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco01g1247 - - - 0.0