Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco01g1380 | ATGTTTGCTAAAAATCTCCACTTCTTCTTTTGGCTCTTACTTTCTCTTCTCATTCTTCACTCAACATCATCATCTATTTCTTCACAAGTGTATATAGTGTACTTAGGGCACAACCGTTTGAGTGATGATGCAACTTTGACCTCCAAATACCATCTTCATCTACTCTCAAAAGTGTTTGCAAGTGAAGAAGATGGTAAAAGAGCCATGTTGTATAGTTACAAGAAAAGTTTTTCGGGGTTCTCAGCAAAGCTTAATGCAAGCCAAGCAATAGCATTATCAAAGATGGAAGGAGTGATATCCGTATTCGAGAGTAAAACAATGCAACTTCACACAACAAGAAGTTGGGATTTCTTGGGCCTTCCGATAATTCCCTCATATACTAATAATATTAAACCACTATTTCCGCTTCGCCTTCCTAGCTATGGCGATCACGATGTTGTTGTTGGCATCTTCGATTCAGGTGTGTGGCCGGAATCTGAAAGTTTCAAGGAGAGTGAGGAGATGGGGAGACTTCCGTGCAATTGGAAAGGTAAATGTGTGAAAGGATACAGATTCAACCCGGCCTTAGCCTGTAACCGCAAGCTAATTGGCGCTCGCTACTACCTTAAAGGCTTCGAAGCCCAATACGGAGCCCTCAACACCACCGCCGGCAACCCCGAGTTCCGCTCCCCTCGAGACTTCTTAGGTCATGGAACTCACACCGCTTCCACTGCGGTGGGTGCGGTCGTACATAATGTCACCTTCACTACATCTTCATCACTGGCTAAAGGCATTGCCCGAGGTGGGGCTCCCTGGGCCAGGCTGGCAGTGTACAAAGTGTGTTGGGGAAAGGACTACGAGGGCAAGTGCACCGATGCCGACGTCATGGCCGCTTTCGACGATGCTTTGCACGACGGAGTGGACGTCATCTCCGCCTCGTTTGGAGAGACGCCGCCGTTGGCTCCGTTGTTTGAGTCGGCCTCGGCTATTGGCTCATTCCATGCGATGCAGCGGGGAGTGAGCGTGGTGTTCTCTGCTGGGAATGATGGACCCCACCCTTCCCTTGTTCAAAATGTGTCTCCTTGGAGTATTTGTGTTGCTGCTTCTACTATGGATCGAACTTTTCCCACTCCAATACTTGTTCAAAACCATTTCTCAATCATGGGGGAGAGCTTGATCACAAGAAATATAATAAACGTAAAGCTGGCAGATGCAATCAACTATTTCATAGATGGAATTTGTGAGAGAGACAACATAAGGAAAGGAGGGAAGTCAGGTAAAGGGAAAGTGGTAGTCTGTTTCTCAACCATTGGCCCAGTTTCCATAGGAACTGCACAAGAAGCAGTGAGAGCCATCAATGGCTCCGCTTTAATATTTGGTGCGCCCCCCACGACGGAGCTCCCAGATCTAGATCTCATCCCCACCGTTCGAATTGACATTGCTCAGGCGACTCAAATTCGAAACTTTCTTGCTGAATTACCCAGACTGCCGGCCGTCGAGATCGGCGTCGCGAGAAGTGTGATTGGGAAATCCGTAGCTCCTAGTGTGGCTTACTTTTCATCCAGAGGACCAAGCTCTATCTTACCTGACATTCTCAAGCCAGACATAAGTGCCCCAGGAGTGAACATATTGGCAGCATGGCCTCCGGAAACAGCTCCGACGGTGAGGCCAAGTGGAAGCGTTATTGAAGAAGAAGGTGTAAAATGGAATTTCCAGTCAGGGACTTCAATGTCATGTCCTCATATCTCTGGAGTAGTTGCCCTTATCAAATCTCTTCATCCCCATTGGTCACCTGCAGCCATTAGATCTGCCATCATCACCACAGCCACGAAGAGGGACTCTAGTGGGAATAGCATCCTAGCAGGCGGATCCATGAAACCATCAGACCCATTTGACGTTGGTGCAGGTCAAGTGAACCCCTTAAAGGCCATAAATCCAGGTCTAATCTACGACATCACAACCAGCGATTACATTAGTTTCCTATGCAATATTGGGTATACAGAACAACAAATCAAGATGCTAATTCTCAACCCTTCTCCTCAATTTTGTTGTCCTCCTCAATCCACTACTACCATTACTGCAAATCTTAATTATCCGTCAATTACACTTACAAATCTTGGCTCTACCACCACACTCAAAAGAATTGTCCGCAATGTATCGCTCAACAAAAACGCCATTTACTTTCTTAGGATTCTTCCTCCCAAGGGAGTCCGAGTACAAGTCTGGCCAAGAATCCTGCTTTTCTCTTGCTTTAGGCAACACGTTTCTTACTATATTACCATAACTCCGCTCAAGAAATCTCGAGGTAGATATGATTTTGGGGAGATTCAATGGTTTAATCGCTTCCATACTGTCACAAGTCCTCTCGTTGTACGTCTTGCCACTTCAACATAA | 2373 | 46.44 | MFAKNLHFFFWLLLSLLILHSTSSSISSQVYIVYLGHNRLSDDATLTSKYHLHLLSKVFASEEDGKRAMLYSYKKSFSGFSAKLNASQAIALSKMEGVISVFESKTMQLHTTRSWDFLGLPIIPSYTNNIKPLFPLRLPSYGDHDVVVGIFDSGVWPESESFKESEEMGRLPCNWKGKCVKGYRFNPALACNRKLIGARYYLKGFEAQYGALNTTAGNPEFRSPRDFLGHGTHTASTAVGAVVHNVTFTTSSSLAKGIARGGAPWARLAVYKVCWGKDYEGKCTDADVMAAFDDALHDGVDVISASFGETPPLAPLFESASAIGSFHAMQRGVSVVFSAGNDGPHPSLVQNVSPWSICVAASTMDRTFPTPILVQNHFSIMGESLITRNIINVKLADAINYFIDGICERDNIRKGGKSGKGKVVVCFSTIGPVSIGTAQEAVRAINGSALIFGAPPTTELPDLDLIPTVRIDIAQATQIRNFLAELPRLPAVEIGVARSVIGKSVAPSVAYFSSRGPSSILPDILKPDISAPGVNILAAWPPETAPTVRPSGSVIEEEGVKWNFQSGTSMSCPHISGVVALIKSLHPHWSPAAIRSAIITTATKRDSSGNSILAGGSMKPSDPFDVGAGQVNPLKAINPGLIYDITTSDYISFLCNIGYTEQQIKMLILNPSPQFCCPPQSTTTITANLNYPSITLTNLGSTTTLKRIVRNVSLNKNAIYFLRILPPKGVRVQVWPRILLFSCFRQHVSYYITITPLKKSRGRYDFGEIQWFNRFHTVTSPLVVRLATST | 790 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 24653082 | 24661833 | + | CcPI632755_01g013800.1 | Cco01g1380 | 170242 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco01g1380 | 790 | Gene3D | - | 654 | 787 | - | - | |
Cco01g1380 | 790 | Gene3D | - | 365 | 501 | - | - | |
Cco01g1380 | 790 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 18 | 110 | IPR037045 | - | |
Cco01g1380 | 790 | Pfam | Subtilase family | 144 | 609 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
Cco01g1380 | 790 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 114 | 637 | - | - | |
Cco01g1380 | 790 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 567 | 577 | IPR023828 | - | |
Cco01g1380 | 790 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 31 | 782 | IPR045051 | - | |
Cco01g1380 | 790 | PRINTS | Subtilisin serine protease family (S8) signature | 143 | 162 | IPR015500 | - | |
Cco01g1380 | 790 | PRINTS | Subtilisin serine protease family (S8) signature | 226 | 239 | IPR015500 | - | |
Cco01g1380 | 790 | PRINTS | Subtilisin serine protease family (S8) signature | 566 | 582 | IPR015500 | - | |
Cco01g1380 | 790 | Gene3D | Peptidase S8/S53 domain | 145 | 650 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Cco01g1380 | 790 | Pfam | Fibronectin type-III domain | 688 | 784 | IPR041469 | - | |
Cco01g1380 | 790 | CDD | Peptidases_S8_3 | 108 | 603 | IPR034197 | - | |
Cco01g1380 | 790 | FunFam | Subtilisin-like protease SBT5.3 | 19 | 110 | - | - | |
Cco01g1380 | 790 | Pfam | Peptidase inhibitor I9 | 30 | 110 | IPR010259 | - | |
Cco01g1380 | 790 | SUPERFAMILY | Subtilisin-like | 9 | 679 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Cco01g1380 | 790 | FunFam | Subtilisin-like protease SBT1.5 | 145 | 400 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco01g1380 | Cco-Chr1:24653082 | Cco07g0867 | Cco-Chr7:20116718 | 1.20E-158 | dispersed | |
Cco01g1380 | Cco-Chr1:24653082 | Cco09g0103 | Cco-Chr9:902807 | 6.60E-128 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco01g1380 | - | - | - | 0.0 |