Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco01g1551 ATGGCGCTCTCTCTATCCCTACAACTCATCCGTTTCCCTCCTCAACCATTATCCTCATCCTCTCAACATCTTCTCATCTCTGACCTCGCCTCCGTCTCGCGCTTCTTCCGATCTCCATGTCTTTCCTCTTTGGCTCCGTCGCGGAGCTGCACGATGAAGTTATCTTCCAGAACCAAGTGTTTCTCCATGTCCACCGAGGAGGAGCAGTGGAGCGAATCGGAAGCGTTGGTGTCCGATGTGGACGGAGGGGGAGATCTTGAGGATGATATTGATATTGGTGTTCAGGAAGACAGCTCTGTGGCCACTGCTGCTTCTGCGCAGAAAAATTCTACCTCGTCGCCTAGTGATTATCTGTCGCTTGCGATCCGAGAGCAGGTTTATGAGGTGTTAGAGGTTAAAGATGATGGAACCGTATCTACCAGGAAGGTTAACAGACGGCAACTATTGAAGTCAAGTGGGCTTCGTCCACGTGATATCCGAAGTGTTGATCCATCTTTATTTTTGACAAACTCAATGCCTACATTACTGGTCCGTGAACATGCTATTTTGCTTAATCTGGGATCATTGCGAGCAATAGCTATGCAGGATTGTGTCCTCATATTTGATTATAACCGTCCAGGAGGACAAGCTTTTATTGAATCATTGTTGCCTCGATTGAACCCAAAAAACATGAATGGAGTGCCAGCAATGCCATTTGAACTTGAGGTTGTTGAAGCTGCATTGCTTTCACGAACTCAGCGTTTGGAGCAGCGACTAATGAAAGTAGAACCTCGTGTTCAAGCTCTGCTTGAGGTATTGCCCAACAAATTAACTGCAGATGTGTTGGAACAACTTCGTATTAGCAAGCAGACATTGGTTGAATTAGGGTCCAGGGCAGGGGCTCTTAGACAGATGCTTCTTGATCTTCTGGAGGATCCGCAAGAAATACGACGCATCTGTATTATGGGAAGAAATTGCACGCTTAATAAAAGAAATCATGATGTGGAGTGCTCTCTCCCTTTGGATAAGCAGATTGCGGATGAAGAGGAAGAAGAAATAGAAATGCTGTTGGAAAATTATCTCCAGAGATGCGAATCTTGTCATGGTCAGGCTGAAAGGCTTCTGGATTCAGCAAAAGAAATGGAAGATTCAATTGCCGTAAATTTGAGCTCGCGGCGACTAGAGGTTAGCAGAGTGGAGTTGCTTCTCCAAGTTGGGACATTTTGTGTGGCAGTTGGTGCTTTAGTTGCAGGAATATTCGGCATGAACTTACGATCATACCTTGAAGAACACGTGTTTGCCTTCTGGTTAACAACAGCTGGGATAATTGTTGGGGCTGTTGTGGCATTCTTTCTCATGTATTCATACCTCAGAGACAGGAGAATCCTCAAAAAGGATATTCGTCTAATCTCAGCAGATTTGGCAGCTATGGTGTCTGGTAAACAGCGGCAAAAAAGAGATCTCATGAGTGAGAGAGAAAATGAGAAGAAAGATCCATGGCACTTATTGACACTACTCTGCGATGACGACGGTCTCAGCACAGACGACAGTGTGAGACAGTCGATGGCGTATAGTGAATTACAATTGAGTAGATTAACATGA 1581 45.22 MALSLSLQLIRFPPQPLSSSSQHLLISDLASVSRFFRSPCLSSLAPSRSCTMKLSSRTKCFSMSTEEEQWSESEALVSDVDGGGDLEDDIDIGVQEDSSVATAASAQKNSTSSPSDYLSLAIREQVYEVLEVKDDGTVSTRKVNRRQLLKSSGLRPRDIRSVDPSLFLTNSMPTLLVREHAILLNLGSLRAIAMQDCVLIFDYNRPGGQAFIESLLPRLNPKNMNGVPAMPFELEVVEAALLSRTQRLEQRLMKVEPRVQALLEVLPNKLTADVLEQLRISKQTLVELGSRAGALRQMLLDLLEDPQEIRRICIMGRNCTLNKRNHDVECSLPLDKQIADEEEEEIEMLLENYLQRCESCHGQAERLLDSAKEMEDSIAVNLSSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNLRSYLEEHVFAFWLTTAGIIVGAVVAFFLMYSYLRDRRILKKDIRLISADLAAMVSGKQRQKRDLMSERENEKKDPWHLLTLLCDDDGLSTDDSVRQSMAYSELQLSRLT 526
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 28169010 28179615 - CcPI632755_01g015510.1 Cco01g1551 170413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco01g1551 526 Gene3D - 119 203 - -
Cco01g1551 526 Gene3D Magnesium transport protein CorA, transmembrane region 206 387 - -
Cco01g1551 526 FunFam Magnesium transporter MRS2-11, chloroplastic 205 387 - -
Cco01g1551 526 Coils Coil 336 356 - -
Cco01g1551 526 CDD Mrs2_Mfm1p-like 129 455 IPR039204 -
Cco01g1551 526 FunFam Magnesium transporter MRS2-11, chloroplastic 122 203 - -
Cco01g1551 526 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 104 455 IPR039204 GO:0009941(PANTHER)|GO:0015095(PANTHER)|GO:0015693(PANTHER)
Cco01g1551 526 Pfam Magnesium transporter MRS2-like 132 386 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco01g1551 K16075 - csv:101219314 754.207