Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco01g1581 ATGGCGCCGGTTTTATCTCGGTTACTTTTCCGACGGAATGTTCACGCACCATTTCTTCGCACCTCCACCACCGCCTTCAACTTTTGCAGAACAATTCATTCTATAGTTTTCTCTACGGTAGAAGTGGATCAACTATCAGGTTCTAAGCCAGGAGATGTTCACAACTTGGTGCAGGGTAAATGGATTGGATCTTCCGGTTGGAATACTATTGTAGATCCTTTAAATGGAGAACCGTTTATTAGAGTTGCCGAAGTCAATGAAACAGAGATTCAGCCATTTGTGAAGAGTCTGACCAAATGCCCTAAGCATGGCTTACATAATCCTTTCAAATCGCCTGAGAGATATCTGTTGTTTGGAGATGTATCTTCCAAGGCTGCTGACATGCTTTCCAAGCCAGAGGTGACTGACTTCTTCGCAAGGTTAATTCAAAGAGTTTCTCCAAAAAGTTATCAGCAAGCTTGTGCTGAAGTGAATGTCACTGGTAAATTTCTACGGAACTTCTCTGGTGACCAGGTTCGCTTCTTAGCAAGGTCCTTTGCAGTACCTGGAGATCATCTTGGACAACAAAGTCATGGTTTCCGTTGGCCTTATGGTCCCGTTGCAATTATCACCCCTTTCAATTTCCCATTAGAAATTCCTGTACTTCAGGTGATGGGTGCACTTTACATGGGCAACAAACCTGTTTTAAAAGTTGATAGCAAGGTTAGCATAGTTATGGAGCAAATGATTCGATTGCTTCACCATTGTGGGCTACCTTTGGAAGATCTAGATTTTATAAATTGTGATGGGAAGACAATGAACAAGTTATTGATTGAGGCAAATCCATCCATGACTCTTTTTACCGGCAGCTCAAGGGTGGCAGATAAGTTGGCTGTAGACTTGAAGGGCCGCATTAAATTGGAAGATGCAGGTTTCGATTGGAAAATCTTAGGACCTGATGTTCAAGAGGAAGACTATGTTGCATGGGTTTGTGACCAAGATGCATATGCTTGTAGTGGCCAGAAGTGCTCGGCACAATCGATACTGTTCATGCATGAGAACTGGTCAACGACTTCACTTATTTCGAAGATAAAGAATCTTGCAGAGAGAAGAAATTTGACCGATTTAACAATTGGCCCAGTTCTTACATTCACAAATGAAATGATACTAGATCATATGAATAAATTGCTCAAAATACCAGGGGCAAAGTTACTCTTTGGTGGTGAACCTCTAAAAAACCATTCCATTCCACCCATATATGGTGCTATAAAACCCACTGCGTTATATATTCCACTCGAAGAAATGATGAAAGATGAGAATTATGAGCTCGTGACTAAAGAAATTTTTGGACCATTCCAGATTATTACGGAATACAAGAGAGATCAACTTCCAGTTGTGTTGGATGCTCTTGAGCGGATGCATGCTCATCTAACCGCCGCTGTTGTTTCAAACGACCCTCTTTTTTTGCAGGAAGTTATTGGCAATACGGTGAACGGAACGACATATGTAGGTTTACGAGCGAGGACAACAGGAGCTCCACAAAACCATTGGTTTGGACCTGCCGGAGACCCTAGAGGTGCAGGTATCGGAACCCCGGAAGCCATCAAACTCGTATGGTCTTGCCATAGAGAGATCATATATGATATTGGCCCGTTGCCCTTGAATTGGACAGTTCCACCATCGACTTGA 1668 42.63 MAPVLSRLLFRRNVHAPFLRTSTTAFNFCRTIHSIVFSTVEVDQLSGSKPGDVHNLVQGKWIGSSGWNTIVDPLNGEPFIRVAEVNETEIQPFVKSLTKCPKHGLHNPFKSPERYLLFGDVSSKAADMLSKPEVTDFFARLIQRVSPKSYQQACAEVNVTGKFLRNFSGDQVRFLARSFAVPGDHLGQQSHGFRWPYGPVAIITPFNFPLEIPVLQVMGALYMGNKPVLKVDSKVSIVMEQMIRLLHHCGLPLEDLDFINCDGKTMNKLLIEANPSMTLFTGSSRVADKLAVDLKGRIKLEDAGFDWKILGPDVQEEDYVAWVCDQDAYACSGQKCSAQSILFMHENWSTTSLISKIKNLAERRNLTDLTIGPVLTFTNEMILDHMNKLLKIPGAKLLFGGEPLKNHSIPPIYGAIKPTALYIPLEEMMKDENYELVTKEIFGPFQIITEYKRDQLPVVLDALERMHAHLTAAVVSNDPLFLQEVIGNTVNGTTYVGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREIIYDIGPLPLNWTVPPST 555
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 28499943 28504947 - CcPI632755_01g015810.1 Cco01g1581 170443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco01g1581 555 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 54 549 IPR044638 GO:0003842(PANTHER)|GO:0004029(InterPro)|GO:0005739(PANTHER)|GO:0010133(PANTHER)
Cco01g1581 555 FunFam Aldehyde dehydrogenase 12 312 500 - -
Cco01g1581 555 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 47 304 IPR016162 GO:0016491(InterPro)
Cco01g1581 555 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 329 340 IPR016160 GO:0016491(InterPro)
Cco01g1581 555 FunFam probable aldehyde dehydrogenase 46 304 - -
Cco01g1581 555 Pfam Aldehyde dehydrogenase family 70 499 IPR015590 GO:0016491(InterPro)
Cco01g1581 555 SUPERFAMILY ALDH-like 53 523 IPR016161 GO:0016491(InterPro)
Cco01g1581 555 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 497 IPR016163 GO:0016620(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco01g1581 K00294 - csv:101214440 1086.63