Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco01g1728 | ATGTCTTCTCTCCCATTTGCTTTCTTCTTCCTCCTCCTCTCCTTCCATTTCTTCTCGGCAATTAGCATCGACTTCCTCGTCGGCGATGAGGATGGCTGGGCAGTCCCTAAACCAAAAGAAGCTGACAAATACAACAAATGGGCTTCCCACAACAGATTCAATATCGATGACACTGTCCATTTCAAGTACGAGAAAGATTCGGTGATGATGGTGACAGAGGAAGAGTACAAACAGTGTTTTTCTTCAAAGCCTCTGTTTTATGAGAACAATGGTGATAGTGTTGTGAAACTTGATAGAGCCGGTTTGTTCTATTTCATTAGTGGAGTTTCAGGGCATTGTCAGAAAGGCCAAAGAATGATAATCAAAGTGTTGGAACCTATAAATCCTCCTCACCCACCAACTGCTCCACCAAATAACAAGAATGCTGCAGCAGCCTCTTCTAATTTGCTCTCTGTTTCATCTTCAATCTTGGGAGTGTTCTTGATGTTGTTCTTTGCTCTGTTTCTGTCCATTTGA | 516 | 42.44 | MSSLPFAFFFLLLSFHFFSAISIDFLVGDEDGWAVPKPKEADKYNKWASHNRFNIDDTVHFKYEKDSVMMVTEEEYKQCFSSKPLFYENNGDSVVKLDRAGLFYFISGVSGHCQKGQRMIIKVLEPINPPHPPTAPPNNKNAAAASSNLLSVSSSILGVFLMLFFALFLSI | 171 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 30010716 | 30011333 | + | CcPI632755_01g017280.1 | Cco01g1728 | 170590 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco01g1728 | 171 | Gene3D | - | 22 | 126 | IPR008972 | - | |
Cco01g1728 | 171 | ProSiteProfiles | Phytocyanin domain profile. | 23 | 125 | IPR003245 | GO:0009055(InterPro) | |
Cco01g1728 | 171 | PANTHER | BLUE COPPER PROTEIN | 16 | 133 | IPR039391 | GO:0009055(InterPro)|GO:0046658(PANTHER) | |
Cco01g1728 | 171 | Pfam | Plastocyanin-like domain | 40 | 117 | IPR003245 | GO:0009055(InterPro) | |
Cco01g1728 | 171 | CDD | OsENODL1_like | 24 | 124 | IPR041846 | - | |
Cco01g1728 | 171 | SUPERFAMILY | Cupredoxins | 23 | 124 | IPR008972 | - | |
Cco01g1728 | 171 | FunFam | Early nodulin-like protein 1 | 22 | 128 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco01g1728 | Cco-Chr1:30010716 | Cco09g2159 | Cco-Chr9:35977729 | 4.30E-32 | dispersed | |
Cco01g1728 | Cco-Chr1:30010716 | Cco06g0614 | Cco-Chr6:6691531 | 3.80E-12 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco01g1728 | - | - | - | 0.0 |