Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco01g1733 | ATGGGTAGTGGTAGAAGAAGGAGGAAGCAACATTTCAGAAGAATTCATGCCTTTCCTTGCGGTAGAGCTTCTTTTAAAGATGAACACTCTTTAATTGGAGGGCCAGGGTTCTCAAGGGTGGTTTACTGTAATGATCCTGATAGTTTTGAGGCCAGTCTTCTCAACTATGGAGGCAATTATGTCAAAACTTCAAAGTATACTATTGCTTCATTCTTCCCCAAATCATTGTTTGAGCAATTCAGAAGAGTTGCCAACTTGTACTTCCTCCTTTGTGCTTTGCTTTCCTTTAGCCCTCTTTCGCCGTATTCGCCGGTCAGCAATGTTCTTCCTCTTGTTGTTGTTATTGGAGTCACCATGGGCAAAGAAGCTCTTGAAGATTGGAGGAGAACCAAACAGGACATGGAGATGAATAACAGGAAGGTGAAAGTACATATTAGAGATGGTGAGTTTGTTGAGACTAAATGGATGGACTTGAAAGTTGGGGATGTAGTTAAAGTGGAGAAAGATGAATTCTTCCCTGCTGATCTCATTTTACTTTCATCGAGTTATGAGGAAGCGATTTGCTACGTCGAGACAATGAATCTTGATGGGGAAACAAATTTGAAACTGAAGAACGCATTAGAAGCAAGCTCAAACTTACATGAGGATTCGAGCTTTCAGAATTTCAAGGCAATAATAAAATGTGAAGACCCCAATGCAAATTTGTATTCCTTTGTGGGAAGTATGGAGCTTGAAGAGCAGCAACATCCACTGAGCCCTCAACAGCTTCTTCTTCGAGACTCGAAGCTTCGAAACACTGATTTTATATATGGTGTGGTGATTTTCACAGGTCATGATACAAAGGTTATTCAGAACTCAACAGCCCCTCCTTCCAAGAGAAGCAAGATTGAGAAGAGGATGGACAAGATTGTGTTCTTACTGTTTGCTGTCTTGGTTTTGATATCAATTGCTGGGTCGATTTTCTTTGGTGTTACGACTAGAGATGATATAGAAAACGGAAGAAGTACGAGATGGTACCTTAGGCCAGATGATACCACAATATATTACAACCCCAAAAATGCTCCAGCTGCAGCACTATTGCAGTTTCTGACTGCTCTTATGCTTTTTAGCTACTTGATTCCCATATCATTGTATGTTTCCATAGAAATTGTCAAAGTTCTGCAGAGTGCCTTCATCAACCAAGATGAACATATGTACCATGAGGAAACTGATAAGCCAGCTCATGCTCGTACCTCAAATTTGAATGAAGAACTTGGCCAAGTTGACACCATTCTTTCCGATAAAACGGGGACATTGACTTGCAATTCGATGGAGTTTATCAAGTGTTCAGTGGGCGGGACTGCTTATGGGCGAGGTATTACAGAAGTAGAGAGAGCTCTTGCAAGAAGAAAGGAGTCAACTTTACCTCAAAATTTAGAGGCCAACAATGCACGTCTTAGCAGCGAAAAACCATTCATTAAGGGGTTCAATTTCAAGGATGAAAGAATAATGGATGGTAACTGGGTGAAGGAGCCTAGAGCCGATGTAATCCAGAAGTTCCTACAGCTTCTGGCCATATGCCATACTGCATTGCCAGAAATTGATGAGGGAACTGGAAAAATTTCTTATGAAGCTGAATCACCAGATGAGGCAGCTTTTGTGATTGCAGCCAGAGAATTCGGTTTTGAGTTCTATGAAAGGACTCAGACAAGCATTTCATTGCGGGAGTTCGATCCGACCTCGGCCGAAATTGTTGAAAGATCATATCAATTATTGGATGTTTTGGAGTTTAATAGCACAAGAAAGCGGATGTCTGTGATTGTAAGAGATGCAAAGGGACAGCTACTACTACTTTGTAAAGGAGCTGACAGTGTTATGTTTGAAAGACTTGCAAAGAATGGAAGTGAGTTTGAAGAACAGACAAAGGTGCACATCAATCAGTACGCCGACGCTGGTTTAAGAACTTTGGTTCTAGCATATCGTGAGCTGAAAGAGGAAGAATTTAATACATTTCATCAAGAATTCATCAAAGCCAAAAACACAGTGAGCACAGATCGCGACGACATAATCGATCAGTTGACAGAAACCATTGAGAAAGATTTGATTCTTCTTGGTGCTACCGCAGTTGAAGATAAACTTCAAAATGGGGTCCCTGAATGCATTGACAAACTTGCTCAGGCTGGAATTAAAATATGGGTTCTGACTGGTGATAAGATGGAAACAGCCATCAACATTGGCTTTGCTTGCAGTTTACTTAGACAAGGAATGAAGCAAATAATTATCAGCTCAGAGACTCCGGAAGGAAAAGCTTTAGACAAAGTTGAAGATGTTCACAAATCCGCAGCTATCAAGGCGTTTAAGGCAAGTGTCACTCAACAAATAACTGATGCGAAAGCATTGCTTACATCCTTGAGCGAAACCCCAGAAGCTTTGGCTTTGATAATTGATGGAAAGTCCCTCACCTATGCTTTGGAGGATGATGTGAAGGACCTATTTCTGGAGCTTGCCATTGGTTGTGCTTCAGTTATATGCTGCAGATCATCTCCTAAACAGAAAGCACAAGTTACCCAATTGGTTAAGGTCAAAACAGGCAGTACCACTCTAGCAGTTGGTGATGGTGCAAATGATGTCGGAATGCTCCAAGAAGCGGATATCGGGATTGGTATTAGCGGTGTCGAAGGGATGCAGGCAGTCATGTCCAGTGACATTGCAATAGCACAGTTTCGATATTTGGAGCGGCTGCTCCTTGTGCATGGACATTGGTGTTACAGGAGGATCTCTTCCATGATATGCTATTTCTTCTACAAGAACATTGTTTTTGGGTTCACTCTCTTCTTCTTTGAGATGTATGCATCATTCTCCGGCCAAGCTGTATACAACGACTGGTTCCTTTCTCTGTATAACGTCTTCTTTACTTCTCTCCCTGTGATCGCATTGGGAGTATTCGACCAAGATGTCTCATCCCGGTACTGTCTCAAGTTCCCACTTCTATACCAAGAAGGTGTCCAAAATGTCTTATTTAGTTGGGTTCGAGTTATCGGTTGGGTGTTCAACGGGCTACTAAGTTCTGTCATCATATTCTTCTTTTGTGTTGGGGCAATGGAACATCAAGCTTTCCGCAACAGCGGAGAGGTGGTCGGGTTGGAAATTCTTGGCGCCACCATGTACACTTGTGTTGTTTGGGTTGTAAACTGTCAAATGGCAATGTCCATCAGTTACTTCACATATATTCAACATCTCTTCATCTGGGGAAGCATCATTCTTTGGTACTTATTCCTCATGGCATATGGTGCTATAAACCCAACCATATCAACAACAGCATTTCAGGTATTTGTCGAGGCCTGCGCTCCGGCACCGTCATTTTGGATCCTCACACTATTGGCTTTGGGAGCTTCCCTTCTCCCATACTTCATCTACGCATCGATCCAAATGCGGTTCTTCCCAATGTATCATCAAATGATTCAATGGATAAAAGCTGACGGGCAGTCGAATGATCCAGAATACTGTCAAGTAGTTAGACAGAGATCACTACGGCACACAACCGTCGGTTACACAGCTCGGTTCGAAGCATCAAAGCATTTTGAAGAAATCCCAGAAATCAAGAACCATTAG | 3591 | 42.19 | MGSGRRRRKQHFRRIHAFPCGRASFKDEHSLIGGPGFSRVVYCNDPDSFEASLLNYGGNYVKTSKYTIASFFPKSLFEQFRRVANLYFLLCALLSFSPLSPYSPVSNVLPLVVVIGVTMGKEALEDWRRTKQDMEMNNRKVKVHIRDGEFVETKWMDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETMNLDGETNLKLKNALEASSNLHEDSSFQNFKAIIKCEDPNANLYSFVGSMELEEQQHPLSPQQLLLRDSKLRNTDFIYGVVIFTGHDTKVIQNSTAPPSKRSKIEKRMDKIVFLLFAVLVLISIAGSIFFGVTTRDDIENGRSTRWYLRPDDTTIYYNPKNAPAAALLQFLTALMLFSYLIPISLYVSIEIVKVLQSAFINQDEHMYHEETDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVGGTAYGRGITEVERALARRKESTLPQNLEANNARLSSEKPFIKGFNFKDERIMDGNWVKEPRADVIQKFLQLLAICHTALPEIDEGTGKISYEAESPDEAAFVIAAREFGFEFYERTQTSISLREFDPTSAEIVERSYQLLDVLEFNSTRKRMSVIVRDAKGQLLLLCKGADSVMFERLAKNGSEFEEQTKVHINQYADAGLRTLVLAYRELKEEEFNTFHQEFIKAKNTVSTDRDDIIDQLTETIEKDLILLGATAVEDKLQNGVPECIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIISSETPEGKALDKVEDVHKSAAIKAFKASVTQQITDAKALLTSLSETPEALALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKAQVTQLVKVKTGSTTLAVGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNIVFGFTLFFFEMYASFSGQAVYNDWFLSLYNVFFTSLPVIALGVFDQDVSSRYCLKFPLLYQEGVQNVLFSWVRVIGWVFNGLLSSVIIFFFCVGAMEHQAFRNSGEVVGLEILGATMYTCVVWVVNCQMAMSISYFTYIQHLFIWGSIILWYLFLMAYGAINPTISTTAFQVFVEACAPAPSFWILTLLALGASLLPYFIYASIQMRFFPMYHQMIQWIKADGQSNDPEYCQVVRQRSLRHTTVGYTARFEASKHFEEIPEIKNH | 1196 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 30045065 | 30049970 | + | CcPI632755_01g017330.1 | Cco01g1733 | 170595 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco01g1733 | 1196 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 427 | 433 | IPR018303 | - | |
Cco01g1733 | 1196 | SUPERFAMILY | Calcium ATPase, transduction domain A | 143 | 284 | IPR008250 | - | |
Cco01g1733 | 1196 | Pfam | Cation transport ATPase (P-type) | 520 | 623 | - | - | |
Cco01g1733 | 1196 | SUPERFAMILY | HAD-like | 420 | 918 | IPR036412 | - | |
Cco01g1733 | 1196 | FunFam | Phospholipid-transporting ATPase | 697 | 903 | - | - | |
Cco01g1733 | 1196 | FunFam | Phospholipid-transporting ATPase | 539 | 697 | - | - | |
Cco01g1733 | 1196 | Pfam | E1-E2 ATPase | 136 | 321 | - | - | |
Cco01g1733 | 1196 | PRINTS | P-type cation-transporting ATPase superfamily signature | 425 | 439 | - | - | |
Cco01g1733 | 1196 | PRINTS | P-type cation-transporting ATPase superfamily signature | 863 | 882 | - | - | |
Cco01g1733 | 1196 | SFLD | p-type atpase | 407 | 914 | IPR044492 | - | |
Cco01g1733 | 1196 | NCBIfam | phospholipid-translocating P-type ATPase | 56 | 1148 | IPR006539 | GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro) | |
Cco01g1733 | 1196 | Gene3D | - | 544 | 697 | IPR023299 | GO:0000166(InterPro) | |
Cco01g1733 | 1196 | NCBIfam | HAD-IC family P-type ATPase | 108 | 223 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Cco01g1733 | 1196 | NCBIfam | HAD-IC family P-type ATPase | 829 | 946 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Cco01g1733 | 1196 | Gene3D | - | 117 | 287 | - | - | |
Cco01g1733 | 1196 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 34 | 1145 | - | GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER) | |
Cco01g1733 | 1196 | SFLD | Haloacid Dehalogenase | 407 | 914 | - | - | |
Cco01g1733 | 1196 | Pfam | Phospholipid-translocating ATPase N-terminal | 41 | 107 | IPR032631 | - | |
Cco01g1733 | 1196 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 496 | 699 | IPR023299 | GO:0000166(InterPro) | |
Cco01g1733 | 1196 | CDD | P-type_ATPase_APLT_Dnf-like | 58 | 1023 | - | - | |
Cco01g1733 | 1196 | Gene3D | - | 698 | 903 | IPR023214 | - | |
Cco01g1733 | 1196 | FunFam | Phospholipid-transporting ATPase | 117 | 287 | - | - | |
Cco01g1733 | 1196 | Pfam | Phospholipid-translocating P-type ATPase C-terminal | 891 | 1141 | IPR032630 | - | |
Cco01g1733 | 1196 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 48 | 1141 | IPR023298 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco01g1733 | Cco-Chr1:30045065 | Cco06g0899 | Cco-Chr6:11443306 | 0.00E+00 | dispersed | |
Cco07g0251 | Cco-Chr7:2561968 | Cco01g1733 | Cco-Chr1:30045065 | 5.40E-152 | transposed | |
Cco01g1733 | Cco-Chr1:30045065 | Cco05g2589 | Cco-Chr5:34145858 | 0.00E+00 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco01g1733 | K01530 | - | csv:101209427 | 2202.17 |