Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco01g1881 ATGGTATTCAAAGGCAGGTTTTTCTCGTCCTCCAAGAAGTCCGATTCTTCCAGCCCTGATGGATCCAGTCCCCGGTTCCTTGGTTCTAACTCACCCATCAGATCCGACAAGAAGAAGAACAAATCAGCCGCCAAAGATGAACCCCAGATTTCTAATCCCAGCAGTAGCAGCTTCAGAGGTACCGTTCTGAAAGATGCTTCCCGGAGCAAGGATTGGAGACGAAAAGACAGTCAAGCTCCATTGCCGATCGAGACGCCCTCGAAGTCTGACCCAATTTCCGGCTTGAACTTGGGGCCGAAGGCCAAGAAGTCGGCCGATGTGAAAGACGTGGCGTCATCGGTTTCACCTATTCTGGCATCATCCCTTGGACTGAATAGGATAAAGACAAGATCAGGCCCGTTGCCGCAGGAGAGCTTCTTGGGTTTCAAAGGTGATAAGGGCTCCTTGGGTTCTAGCAATCTTTCCAGGAATTGCGGCGATGGAAGCTCAGGCTCGAATTCAGGTTCAACATGGTCGGGGTCTTCTAGCGTGGGGAAGAGAGAGGCGGCGAGTCAGAAAAGATTGGGTTTTCAGGAAAATGTTAAAAGCTATATTCGCGATGCTAGCAATTCCGACAATATGCCAATTGGTAATGCACCATCTACTGAGCGGAGTCCAAATTTGTTAGGACAGCCTCGGGTACAGAATGTCGCTTCATCCAATGAAGCTGGATGCTATGAATCATCATGGGGATGTTCTGACGGATTAAGAAATTTAGATTTCTGTACACCAGAGTCCTCTTATGATTGTGAAAATCCCAAGGAGTCTGAATCTCCACGCTTTCAAGCTATACTGCGAGTCACAAGTGCTCCTCGAAGGAAGTATCCTGCCGATATCAAAAGTTTTTCCCATGAACTAAATTCAAAAGGTGTACGACCTTTCCCACTTTGGAAGTCACGCCGTTTAAATAATTTGGAGGAGATCTTAGTTATGATACGAGCGAAATTTGACAAGGCAAAGGAAGAAGTAAATTCTGACTTGGCTATTTTTGCTGCTGATCTGGTTGGAGTTCTTGAAAAAAATGTCGATGCTCATCCAGAGTGGCAAGAGACAATTGAAGACTTGTTGGTTTTAGCTCGAAGCTGTGCTATGTCATCCCCTGGTGAATTTTGGCTTCAGTGTGAAAGCATTGTTCAGGAATTGGATGATAGACGCCAAGAACTTCCTCCTGGCATGCTGAAACAACTTCATACTCGAATGTTGTTCATTCTCACTAGATGTACCAGGTTGCTGCAGTTCCATAAGGAAAGTGGGTTAGCTGAAGATGAAAATGTTTTTCAGCTTCGTCAGTCGAGAAATCTGCATTCTGCTGATAAACGCATTGCTCCATCTATGGGAAGGGAAGTGAAAAGTTCTAGTGCAGCCAAGGCTTCTAAGACAACTTCTTCCAGGAAGTCTTACAGCCAGGAGCAGCGTGGTTTGGATTGGAGCAGAGAACATGATATACTGCCTGGGAATAATGTCTCAACATCTCCCGATGATACTTCGAAGAACTTGGTATCTCCTACTGGCAGAGACCGGATGGCTTCTTGGAAAAGATTGCCTTCTCCAGCAGCAAAAAGTGTGAAAGAACCTACTTTGAAGGATCAGGGTGATAATAAGAAATTTAAATCTTTGAACATGTCAAAAATCAGGATGGGTGTTTCTGAAGCTGATTTGCCTGCTGCTAAGGTTTCTGAGCTTCCTCTGCCCAGAGATTCTCATGACCAACCTACAAAGCACCAACATAAACCTTCTTGGGGTTGGGGTGATCAACCAACTGTATCTGATGAGAGTTCAATAATTTGTCGCATTTGTGAAGAAGAAATTCCAACTGCAAATGTGGAAGATCATTCAAGAATTTGCGCAGTTGCTGATCGATGTGATCAGAAAGGTATAAGTGTTAATGAACGTCTACTCAGAATTGCTGAAACTTTAGAGAAAATGATAGAGTCTTTTACGCAAAAGGATTCTCAGCATGTAGGAAGTCCGGATGTTGCAAAAGTTTCTAATTCTAGTGTGACTGAAGAATCAGATATTTCCCCAAAACACAGTGATTGGTCCCGCAGGGGCTCAGAAGACATGCTAGATTGCTTCCATGAAACTGATAGTTCTGTATTTATGGATGACTTAAAAGGTTTACCTTCCATGTCTTGTAAAACTCGTTTTGGTCCAAAGTCTGATCAGGGTATGACAACATCATCGGCTGGTAGCATGACTCCTAGATCTCCCTTATTAACACCAAGGACCAGTCAGTTTGACTTGTTTTTGGCAGGGAAAGGTGCTTACTATGAACATGATGATCTTACGCAG 2331 44.23 MVFKGRFFSSSKKSDSSSPDGSSPRFLGSNSPIRSDKKKNKSAAKDEPQISNPSSSSFRGTVLKDASRSKDWRRKDSQAPLPIETPSKSDPISGLNLGPKAKKSADVKDVASSVSPILASSLGLNRIKTRSGPLPQESFLGFKGDKGSLGSSNLSRNCGDGSSGSNSGSTWSGSSSVGKREAASQKRLGFQENVKSYIRDASNSDNMPIGNAPSTERSPNLLGQPRVQNVASSNEAGCYESSWGCSDGLRNLDFCTPESSYDCENPKESESPRFQAILRVTSAPRRKYPADIKSFSHELNSKGVRPFPLWKSRRLNNLEEILVMIRAKFDKAKEEVNSDLAIFAADLVGVLEKNVDAHPEWQETIEDLLVLARSCAMSSPGEFWLQCESIVQELDDRRQELPPGMLKQLHTRMLFILTRCTRLLQFHKESGLAEDENVFQLRQSRNLHSADKRIAPSMGREVKSSSAAKASKTTSSRKSYSQEQRGLDWSREHDILPGNNVSTSPDDTSKNLVSPTGRDRMASWKRLPSPAAKSVKEPTLKDQGDNKKFKSLNMSKIRMGVSEADLPAAKVSELPLPRDSHDQPTKHQHKPSWGWGDQPTVSDESSIICRICEEEIPTANVEDHSRICAVADRCDQKGISVNERLLRIAETLEKMIESFTQKDSQHVGSPDVAKVSNSSVTEESDISPKHSDWSRRGSEDMLDCFHETDSSVFMDDLKGLPSMSCKTRFGPKSDQGMTTSSAGSMTPRSPLLTPRTSQFDLFLAGKGAYYEHDDLTQ 777
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 31319305 31324846 + CcPI632755_01g018810.1 Cco01g1881 170743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco01g1881 777 MobiDBLite consensus disorder prediction 196 222 - -
Cco01g1881 777 MobiDBLite consensus disorder prediction 496 516 - -
Cco01g1881 777 MobiDBLite consensus disorder prediction 538 552 - -
Cco01g1881 777 MobiDBLite consensus disorder prediction 450 553 - -
Cco01g1881 777 MobiDBLite consensus disorder prediction 660 694 - -
Cco01g1881 777 MobiDBLite consensus disorder prediction 148 181 - -
Cco01g1881 777 MobiDBLite consensus disorder prediction 728 753 - -
Cco01g1881 777 MobiDBLite consensus disorder prediction 661 684 - -
Cco01g1881 777 MobiDBLite consensus disorder prediction 464 483 - -
Cco01g1881 777 MobiDBLite consensus disorder prediction 726 753 - -
Cco01g1881 777 MobiDBLite consensus disorder prediction 9 30 - -
Cco01g1881 777 MobiDBLite consensus disorder prediction 574 599 - -
Cco01g1881 777 MobiDBLite consensus disorder prediction 46 63 - -
Cco01g1881 777 Coils Coil 642 662 - -
Cco01g1881 777 MobiDBLite consensus disorder prediction 1 222 - -
Cco01g1881 777 Coils Coil 315 335 - -
Cco01g1881 777 MobiDBLite consensus disorder prediction 64 78 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco01g0546 Cco-Chr1:5318404 Cco01g1881 Cco-Chr1:31319305 1.50E-107 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco01g1881 K08789 - csv:101214945 1384.01