Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cco01g1883 | ATGTATGCAGACAGCATGAACATATTATACTTTGATGTTTTGAGGGGTGGTAATGTTTTAATCAGTGATCTTGCAGATATTGCACGCTATTCAGCAAATACACCTCTGGGTGATGATTGCTCGATGCAATACCTGCTAACATGCCTTGAGGACTTGAGAGTCGTCATTAACCGCAGGAAGTTTAATGCGCTGACAGTTGACACTTTTGGCACTCGCATTGAAAAGTTAATCCGGGAGAAGTATTTGCAACTTTGTGAGCTGGTGGATGATGAAAAGATTGACATAGCAAGTACTGTTATTGATGAAGATACTCCTCTTGAAGATGATATTGTTCGTAGCTTAAGAACTAGTCCAATCCATTCTTCAAAGGACCGTACATCAATTGACGACTTTGAGATTATAAAACCAATCAGCCGTGGGGCATTTGGTCGGGTTTTCCTGGCTAAAAAGAGGACAACGGGGGACCTTTTTGCAATAAAGGTTAATTTTCACACTGATGCTTAA | 504 | 40.48 | MYADSMNILYFDVLRGGNVLISDLADIARYSANTPLGDDCSMQYLLTCLEDLRVVINRRKFNALTVDTFGTRIEKLIREKYLQLCELVDDEKIDIASTVIDEDTPLEDDIVRSLRTSPIHSSKDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVNFHTDA | 167 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 31335833 | 31336629 | + | CcPI632755_01g018830.1 | Cco01g1883 | 170745 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cco01g1883 | 167 | Gene3D | Phosphorylase Kinase; domain 1 | 48 | 165 | - | - | |
| Cco01g1883 | 167 | SUPERFAMILY | Protein kinase-like (PK-like) | 114 | 163 | IPR011009 | - | |
| Cco01g1883 | 167 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 84 | 161 | IPR050236 | GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER) | |
| Cco01g1883 | 167 | ProSiteProfiles | Protein kinase domain profile. | 131 | 167 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cco01g1883 | K08789 | - | csv:101214945 | 274.248 |