Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco01g1887 ATGAGATTATTGACAGAAGATCCTAACCAGCGACTTGGAGCTATAGGCGCATCGGAGGTAAAGCAGCATATGTTCTTCAAAGATATTAACTGGGACACGCTTGCCCGACAAAAGGCTGCATTTGTTCCAACATCTGAAAGTGCTCTTGATACTAGTTATTTTACAAGTCGCTACTCATGGAACCATTCAGATGGTCATGTCTATCCACACAGTGAACTTGAAGATTCGAGTGATGCCGACAGCTTAAGTGGTGATAGTAGTTTGAGCAATCGCCAAGATGAAGTGGGAGATGAATGTGGGGGCCTTACAGATTTTGAGCCTGGTTCTTCTGTCAATTACTCATTCAGTAATTTCTCTTTCAAGAATCTCTCCCAGCTTGCATCCATCAACTACGACCTGCTTTCCAAGGGTTTGAAGGATGATCCTCCCAATCATGATGCATAA 444 43.24 MRLLTEDPNQRLGAIGASEVKQHMFFKDINWDTLARQKAAFVPTSESALDTSYFTSRYSWNHSDGHVYPHSELEDSSDADSLSGDSSLSNRQDEVGDECGGLTDFEPGSSVNYSFSNFSFKNLSQLASINYDLLSKGLKDDPPNHDA 147
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 31376735 31381813 + CcPI632755_01g018870.1 Cco01g1887 170749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco01g1887 147 Gene3D Phosphorylase Kinase; domain 1 44 59 - -
Cco01g1887 147 Gene3D Transferase(Phosphotransferase) domain 1 2 43 - -
Cco01g1887 147 ProSiteProfiles AGC-kinase C-terminal domain profile. 27 130 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cco01g1887 147 PANTHER SERINE/THREONINE-PROTEIN KINASE 2 122 IPR050236 GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER)
Cco01g1887 147 MobiDBLite consensus disorder prediction 67 103 - -
Cco01g1887 147 SUPERFAMILY Protein kinase-like (PK-like) 2 65 IPR011009 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco01g1887 K08789 - csv:101214945 268.47