Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco02g0029 ATGGATGGAAGAGGGAATATTGTTCATGAACCTCCAAATGCAAAGTTTGAATTCACTCCAACATGGATCATTGCTGTTGTTTCATCTATTATTGTTATCATTTCCTTCTCTGTTGAGCGTGGCCTTCATCGCCTTGGACAGGGAAAAGTTCCTCTATTGTCCTTGGAAGCTTTGCATCAGCTGCATATTTTCATATTTGTGTTGGCTGTTGTTCATGTCATCTTCTGTGCTACAACCATGCTTCTAGCTTCTGCAAAGATACGGTTGTGGAAGAGGTGGGAGAATTCTATTCATCGGGGAACTACAATATCTCAAGATGATAATGAGTTTAAAGAACGTGCCGAAGGATTTTGGAAAAATGCTGCTGTCATAGCTTGGATGGTTGCATTTGCGAAGCAGTTTCATGGATCAATCACAAAGTCCGATTACATTTATCTTCGACAAGGCTTTATTAAGAAACATTGCCCTGGGGAACCTAATTTTAATTTCTATGACCACATTACAAAGACATATCAACATGATTTCAAGAAAGTTGTCGGTATAAGTTGGTATCTTTGGGCCTTTGTTGTGCTCTTCTTGCTGCTTAATCTTGAAGGATGGCACACTTATTTTTGGATGTCGTTTCTTCCACTAATTATGTTACTTCTAGTGGGGGCAAAGTTGGAATACGTAATAACACGTATGGCTCAAGAATTAAACTCGAGAATAGAAGACAAAGAAGCACAACAAGAACAAGTACATGACAACATTAATAGATTTCATAGACAACATAAGGAAATCAAAAGACATGGTAGCCGCCATGTAGTGAATCCCTCAAACGAACACTTTTGGTTTGGTCGTCCTTCTCTTGTTCTTGTCTTGATTCATTTCATTCTCTTTCAAAATTCCTTCGAGATTGCCTTCTTCTTTTGGATTTGGACAACTTATGGATTTAAGTCATGCATTATGGACAAACCTGCGTTCATCATCACTAGACTCATCTTGGGTGGCATTGTTCAAGTGCTATGCAGTTATAGCACATTGCCTTTGTATTCTTTAGTCACTCAGACGCCCGCACTCACACGAGTGGAAGCAAGCGCACGGGACATGGGTGAGGGTGACACTCATGGGCTCTTCAACGGACTTTTGGAATGGAAAGTGAAGACACTCGAAGTGAGAGGAGCAAGATACGTTTGTGGAAGAGGTAGGAGGATTCTATTCATCAGGGAACTACGATATCTCAAGGTTGCGTTTGCGAAGCAGTTTCATGGATCAATCACAGAGACAGATTACATTTATCTTCGACAAGCCTTTATTAAGATGCTTTTTCTAATGGGGGCAAAGTTGGAATACATAATAACACGTATGGCTCAAGAATTAAACTCTAGAGTAGAAGACAAAGAAGCACAACAAGAACAAGTACATGACAACATTAATAGATTTCATAGACAACATAAGGAAATCAAAAAACATGGTGGCCACCATGCAGTGAATCCCTCAGATGAACTCTTTTGGTTTGCTCGTCCTTCTTTTGTTCTTGTCTTGATTCGTTTCATTCTGTTTCAAAATTCCTTCCAGATTGCCTTCTTATTTTGGATTTGGACGACTTATGGATTTAAGTCATGCATTATGGAGAAACCCGCATTCAACATCACTAAACTCATCTTAGGGTGA 1653 39.56 MDGRGNIVHEPPNAKFEFTPTWIIAVVSSIIVIISFSVERGLHRLGQGKVPLLSLEALHQLHIFIFVLAVVHVIFCATTMLLASAKIRLWKRWENSIHRGTTISQDDNEFKERAEGFWKNAAVIAWMVAFAKQFHGSITKSDYIYLRQGFIKKHCPGEPNFNFYDHITKTYQHDFKKVVGISWYLWAFVVLFLLLNLEGWHTYFWMSFLPLIMLLLVGAKLEYVITRMAQELNSRIEDKEAQQEQVHDNINRFHRQHKEIKRHGSRHVVNPSNEHFWFGRPSLVLVLIHFILFQNSFEIAFFFWIWTTYGFKSCIMDKPAFIITRLILGGIVQVLCSYSTLPLYSLVTQTPALTRVEASARDMGEGDTHGLFNGLLEWKVKTLEVRGARYVCGRGRRILFIRELRYLKVAFAKQFHGSITETDYIYLRQAFIKMLFLMGAKLEYIITRMAQELNSRVEDKEAQQEQVHDNINRFHRQHKEIKKHGGHHAVNPSDELFWFARPSFVLVLIRFILFQNSFQIAFLFWIWTTYGFKSCIMEKPAFNITKLILG 550
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 374512 388116 - CcPI632755_02g000290.1 Cco02g0029 170786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco02g0029 550 Coils Coil 450 470 - -
Cco02g0029 550 Coils Coil 229 249 - -
Cco02g0029 550 Pfam Mlo family 47 350 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Cco02g0029 550 Pfam Mlo family 486 550 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Cco02g0029 550 PANTHER MLO-LIKE PROTEIN 1 48 350 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco02g0029 Cco-Chr2:374512 Cco06g0054 Cco-Chr6:519452 5.20E-87 dispersed
Cco02g0029 Cco-Chr2:374512 Cco02g2253 Cco-Chr2:35108370 3.10E-63 transposed
Cco02g0029 Cco-Chr2:374512 Cco03g0237 Cco-Chr3:2541930 3.10E-63 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco02g0029 K08472 - csv:101216903 512.686