Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco02g0032 ATGACTGAAAATCTTGCGTCGCCGGTCGCAGCTTCTCCCTTGAAGCTTTACTCGTACTGGAGGAGCTCTTGTTCTCACCGTGTTCGAATTGCCCTAAACTTGAAAGGTCTAAATTTCGAGTACAAAGCTGTTAACCTACTGAAGGGAGAGCAATTCACTCCCGAGTATGAGAAGCTCAATCCTATTGGTTATGTACCCACTCTTGTGGATGGGGATGTTGTTATTGCCGACTCTTTTGCTATATTAATGTATTTGGAGGAGAAGTACCCTCAGCATCCTCTGTTGCCTCGTGATCTTAGTAAAAGAGCTATTAATTACCAGGCTGCAAACATCGTTTCTTCTAGCATACAGCCTCTTCAAAATCTAGCTGTTCTGAAGTACATTGAGGAAAAATCTGGTCCAGAAGAGAAACTTCGTTGGGTTCAACATCACATTGAAAAAGGTTTTACAGCACTTGAAAAGCTGCTAAAAGTTCATGCTGGGAAATATGCTACTGGAGACGAAATCTGTCTGGCGGACTTGTTTTTGGCTCCTCAAATTCATGGCGCCATCAATAGATTCAGTGTTGACATGTCCAAATTTCCTCTTTTATGCAGGTTGAATGAGGAATACAACGCTATAGCAGCATTTCAAGATGCAGCGCCAGCAAACCAGCCTGATGCTACTCAAACCTCTACTTAA 681 42.73 MTENLASPVAASPLKLYSYWRSSCSHRVRIALNLKGLNFEYKAVNLLKGEQFTPEYEKLNPIGYVPTLVDGDVVIADSFAILMYLEEKYPQHPLLPRDLSKRAINYQAANIVSSSIQPLQNLAVLKYIEEKSGPEEKLRWVQHHIEKGFTALEKLLKVHAGKYATGDEICLADLFLAPQIHGAINRFSVDMSKFPLLCRLNEEYNAIAAFQDAAPANQPDATQTST 226
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 410049 414482 + CcPI632755_02g000320.1 Cco02g0032 170789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco02g0032 226 SUPERFAMILY Thioredoxin-like 8 97 IPR036249 -
Cco02g0032 226 Gene3D - 97 224 - -
Cco02g0032 226 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 12 93 IPR004045 -
Cco02g0032 226 FunFam Glutathione S-transferase Z1 12 96 - -
Cco02g0032 226 FunFam Maleylacetoacetate isomerase 97 224 - -
Cco02g0032 226 CDD GST_N_Zeta 14 86 IPR034333 -
Cco02g0032 226 CDD GST_C_Zeta 101 218 IPR034330 -
Cco02g0032 226 PANTHER MALEYLACETOACETATE ISOMERASE 14 221 - GO:0004364(PANTHER)|GO:0006559(PANTHER)|GO:0006749(PANTHER)|GO:0016034(PANTHER)
Cco02g0032 226 Pfam Glutathione S-transferase, N-terminal domain 12 86 IPR004045 -
Cco02g0032 226 ProSiteProfiles Glutaredoxin domain profile. 2 102 - -
Cco02g0032 226 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 98 223 IPR010987 -
Cco02g0032 226 SFLD Glutathione Transferase (cytosolic) 14 196 IPR040079 -
Cco02g0032 226 SFLD Main (cytGST) 14 196 - -
Cco02g0032 226 NCBIfam maleylacetoacetate isomerase 15 221 IPR005955 GO:0003824(InterPro)|GO:0005737(InterPro)|GO:0009072(InterPro)
Cco02g0032 226 SUPERFAMILY GST C-terminal domain-like 93 221 IPR036282 -
Cco02g0032 226 Gene3D Glutaredoxin 12 96 - -
Cco02g0032 226 Pfam Glutathione S-transferase, C-terminal domain 126 206 IPR004046 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco02g0032 Cco-Chr2:410049 Cco05g0266 Cco-Chr5:2125212 3.60E-71 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco02g0032 K01800 - csv:101213302 396.741