Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco02g0072 ATGGGAGAGAAGAAAAGAGGTTTGATGGTAGTGATTCTAATTCAAACCATTAACTCCGGCATGTTTTTGCTCTCAAAGGCCGCATTCATCGCCGGAATGAACCATTATGTCTATATTTTTTATCGCCAACTCACCGCCACCATCTTCCTTTCTCCCTTTGCCTTCTTTTTTCAATGGAAAGACGTCCCACCCTTGACATTCTTTACTTTCTGCAACATTTTTGTGCTATCTTTGTTTGGGATAGCCATATGTTTAAATCTGTATGGAATTGCTCTTGCGTACACGTCAGCAACATTGGCTGCAGCAACTGCCAACTGTCTTCCCGTCATCACCTTCTTTGTCGCGCTTTTACTTAGGATGGAAGTGTTGAGGATGAAATCAATAGCAGGAATTGCAAAGCTAGCAGGAATAATATTGTGCATTGGTGGTGTGGGAATGTTGGCATTTTACAAAGGCCCTCAATTCAACTTGTTTAACAATCATCATCTCTTATCTATCCATCACCATTCTTCTAATTCTCTTACATTGCCCAAATCTTGGTTGAAGGGTTGCCTTTTGATGCTAGCTTCCAATACCTTATGGAGCATTTGGATTGTTCTTCAGGGGATGATGACTGCGGTTACATATTGTCTTCAAGCTTGGGTTATTGAGAAGAAAGGAGCAGTTTATGTAGCCATGTCTACACCTTTGGCTCTTATCATAACAATCTTCTTTTCTGCTATTTTTCTTGGAGAGAGTATCACTCTTGGAAGTAGTTTAGGGGGAATGTTGTTGGTGGGAGGGCTTTATTTTGTTCTATGGGGAAAGAGCAAAGAGCAAAAAGTATGTGATCGTTTATATGTGGTTAGCGAATCCTACGCTATATTCAGCGATCTCTGA 879 40.73 MGEKKRGLMVVILIQTINSGMFLLSKAAFIAGMNHYVYIFYRQLTATIFLSPFAFFFQWKDVPPLTFFTFCNIFVLSLFGIAICLNLYGIALAYTSATLAAATANCLPVITFFVALLLRMEVLRMKSIAGIAKLAGIILCIGGVGMLAFYKGPQFNLFNNHHLLSIHHHSSNSLTLPKSWLKGCLLMLASNTLWSIWIVLQGMMTAVTYCLQAWVIEKKGAVYVAMSTPLALIITIFFSAIFLGESITLGSSLGGMLLVGGLYFVLWGKSKEQKVCDRLYVVSESYAIFSDL 292
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 758651 766765 - CcPI632755_02g000720.1 Cco02g0072 170829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco02g0072 292 PANTHER WAT1-RELATED PROTEIN 203 274 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cco02g0072 292 Pfam EamA-like transporter family 204 266 IPR000620 GO:0016020(InterPro)
Cco02g0072 292 Pfam EamA-like transporter family 6 138 IPR000620 GO:0016020(InterPro)
Cco02g0072 292 SUPERFAMILY Multidrug resistance efflux transporter EmrE 188 271 - -
Cco02g0072 292 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 151 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco02g0072 Cco-Chr2:758651 Cco04g1325 Cco-Chr4:28566979 1.10E-56 dispersed
Cco02g0072 Cco-Chr2:758651 Cco02g0073 Cco-Chr2:770456 6.90E-123 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco02g0072 - - - 0.0