Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco02g0076 | ATGGCGAAATCCCCAGAAAATGAACATCCTCACAAAGCTTTTGGTTGGGCTGCTCGAGATTCTTCTGGCTTACTCTCCCCTTTTCATTTCTCTCGAAGGGAAAATGGTGATGATGATGTGTCTATCAAAGTCCTTTACTGTGGGGTCTGCCACTCTGATCTGCACATGCTCAAGAATGACTGGGGTTCTACAGATTATCCTGTAGTACCAGGGCATGAGATTGTTGGTGTTGTGACTTCTGTTGGGAAAAATGTGAAGAAATTCAAAGCAGGAGACGAAGTTGGGGTCGGTGTCATAGTTGGATCTTGTAGAAATTGTGAAAACTGCAGACAAGACTTGGAGAGTTACTGCTCCAAGATGGAATATACTTACAATTCTCCTGGAGTTGATGGAACGAAGAATTACGGTGGTTATTCAGATAAGATCGTTGTCGATCAGCATTTTGTTGTGAGATTTCCTAAAAACTTAGCTCTTGATGCTGGTGCTCCACTCCTATGTGCTGGGATTACAGTTTATAGCCCAATGAGACATTTTGGAATGACTGAACCTGGTAAGCATTTGGGTGTGGCTGGACTTGGTGGGCTTGGTCATGTTGCTGTTAAGTTTGGTAAGGCATTTGGATTGAAAGTTACTGTCATTAGTACCTCTTCTAGGAAGAAGGAAGAAGCAATCAACAGGCTTGGTGCAGATGCTTTCGTTGTTTCAAGTGATCCCGAACAATTGAAGGCTGCCATGGGAACTATGGATTACATTTTGGACACAATATCTGCTGTTCATCCTCTTGATCCGTTGATTAGTCTGCTAAACCTCAATGGAAAATTTGTCGCTGTTGGTTTACCTAACAAGCCACTTGAACTATCGCTCGGGTGTCTCGTTTCTGGTAGGAGGCTGGTTGCTGGAAGCAACTTTGGAGGACTGAAAGAGACACAAGAGATGTTAGATTTCTGTGGAAAACACAATATTACAGCAGAAATTGAGCTCATTAAGATGGATGCCATTAATTCGGCTATCGAAAGGCTTGGGAAAGCTGATGTTAAATATCGGTTTGTGATCGACATCAGAAACTCTTTCAAATAG | 1077 | 42.62 | MAKSPENEHPHKAFGWAARDSSGLLSPFHFSRRENGDDDVSIKVLYCGVCHSDLHMLKNDWGSTDYPVVPGHEIVGVVTSVGKNVKKFKAGDEVGVGVIVGSCRNCENCRQDLESYCSKMEYTYNSPGVDGTKNYGGYSDKIVVDQHFVVRFPKNLALDAGAPLLCAGITVYSPMRHFGMTEPGKHLGVAGLGGLGHVAVKFGKAFGLKVTVISTSSRKKEEAINRLGADAFVVSSDPEQLKAAMGTMDYILDTISAVHPLDPLISLLNLNGKFVAVGLPNKPLELSLGCLVSGRRLVAGSNFGGLKETQEMLDFCGKHNITAEIELIKMDAINSAIERLGKADVKYRFVIDIRNSFK | 358 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 815910 | 819460 | + | CcPI632755_02g000760.1 | Cco02g0076 | 170833 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco02g0076 | 358 | ProSitePatterns | Zinc-containing alcohol dehydrogenases signature. | 71 | 85 | IPR002328 | GO:0008270(InterPro)|GO:0016491(InterPro) | |
Cco02g0076 | 358 | Gene3D | - | 167 | 323 | - | - | |
Cco02g0076 | 358 | Pfam | Zinc-binding dehydrogenase | 194 | 316 | IPR013149 | - | |
Cco02g0076 | 358 | Gene3D | - | 16 | 353 | - | - | |
Cco02g0076 | 358 | PANTHER | ALDEHYDE REDUCTASE | 5 | 356 | IPR047109 | GO:0009809(PANTHER)|GO:0016616(InterPro)|GO:0016616(PANTHER)|GO:0045551(PANTHER) | |
Cco02g0076 | 358 | FunFam | probable cinnamyl alcohol dehydrogenase | 16 | 174 | - | - | |
Cco02g0076 | 358 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 158 | 321 | IPR036291 | - | |
Cco02g0076 | 358 | CDD | CAD1 | 14 | 352 | IPR047109 | GO:0016616(InterPro) | |
Cco02g0076 | 358 | SUPERFAMILY | GroES-like | 20 | 185 | IPR011032 | - | |
Cco02g0076 | 358 | SMART | PKS_ER_names_mod | 23 | 351 | IPR020843 | GO:0016491(InterPro) | |
Cco02g0076 | 358 | FunFam | Cinnamyl alcohol dehydrogenase | 167 | 323 | - | - | |
Cco02g0076 | 358 | Pfam | Alcohol dehydrogenase GroES-like domain | 36 | 154 | IPR013154 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco02g0076 | Cco-Chr2:815910 | Cco04g1584 | Cco-Chr4:31215056 | 1.10E-143 | dispersed | |
Cco02g0076 | Cco-Chr2:815910 | Cco02g0077 | Cco-Chr2:828367 | 1.40E-178 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco02g0076 | K00083 | - | csv:101205228 | 667.922 |