Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco02g0151 ATGCCTGCATCTCCTTCGCTTAGTTTCTCGCGTCCAATCTATCTCTCTACAACACGTCGTTGTCCATGTCGAGATTATCGTCCGCTTCCTCAGGTTGGTGTTGTTGCGGAGGGTAGCACCAATAGATCTCTTATTTACTATCTCCTGACATCTCTTTTCCATAAGGTCTTACATGCAAATGAAGTAATCGACCCCGTACTCTACCACTGTTGTTTAGCAGTTATCGTCGTTGTGTGGTTGCTAGAGGAAACGACCAGCATTGTTCTACTTGAAAACCACCACTCTCTGTGTAGTAACCCTCACCGAGCCAGGCCAAAATGCAAAATGCTAAAACGACCCCAAAGGTTTTGGGTATTTCCTATTAAGTGCCCAATAAAATATGATATTACAGATGTACCCTATTCTTGCATGCAAAGTAACACGGCCCTACCCTCCGCCTCACTTTTCCCTTCTGCGCGAAAAACAGGAAAGATGTTTGCGGTTGGTCCGAGCAACGCCCGACTCCACTGCAACTCACCGAATCCGCTCCTCCCGCTGCCGCCGCCGACAACGACGGCGATAGGCGCATCCGTACGGTACAAGAATGTGTTTCTGAAAAGATGTTTCAAGCCCGGCCAAGTGGTTATGCCCCAATGTCGTCGATTGGGTTCTGCTAACTTGGACACTAAACTTGTTTTATCTATTGCCAATACTAAACAGGAACTTTGTAAAGAACTGAAGCTTTCTTCTTCTAGAGGAATGTTGATATCACAGATTTCTGCAGCAGCATCCCCACATCTATCTGGGGAACAAGGCAGTCTATTCCACAAACTTCCACTTTTACCTCCACGAAATTGTGCTGGAAAGAGTCCTCGAGCATTCAGAGACGACTCTTACAGTGTAAAACGCTACTCTGGGGTCACCCAAAAACCAGAATGGTGGTGGAGAACTTTGGCTTGTGTTCCATATTTGATGGCTTTGCAGATGTCAAGTACAGCATATTACCTCTTGCCCTTGTTGGAACACTTGGATGTTGATAATTTGATATTTTATGTCCCTGGATCTGTTCAGAAGTTACCGTGGTGGTTCCCCATGTTGTACTTCAACCTCGCATACTTCGGACTCGTGAGGAATAAAGAATTGCCTCATTTCATTCGGTTCCATGTCATGATGGGGATGTTATTAGAAACCTCGCTCGACATCATATGGTATGCAAGCAATTTCATGCCACTCATACATTACAATGGTACATATGCAATGCAGTATTGGGGAGCAGTGGGGTTCATCTACATTTCCGTCTTGTTGGTGTGTATAAGGAGTTCTCTCTTGGGGACTTATGCCAAAATACCATTCATTTTCGAAAATGCACTTATTCATACATTCTTTAGTATAGGACGATATTATAGACCATTCTAG 1395 44.52 MPASPSLSFSRPIYLSTTRRCPCRDYRPLPQVGVVAEGSTNRSLIYYLLTSLFHKVLHANEVIDPVLYHCCLAVIVVVWLLEETTSIVLLENHHSLCSNPHRARPKCKMLKRPQRFWVFPIKCPIKYDITDVPYSCMQSNTALPSASLFPSARKTGKMFAVGPSNARLHCNSPNPLLPLPPPTTTAIGASVRYKNVFLKRCFKPGQVVMPQCRRLGSANLDTKLVLSIANTKQELCKELKLSSSRGMLISQISAAASPHLSGEQGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLDVDNLIFYVPGSVQKLPWWFPMLYFNLAYFGLVRNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWGAVGFIYISVLLVCIRSSLLGTYAKIPFIFENALIHTFFSIGRYYRPF 464
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1553789 1557661 + CcPI632755_02g001510.1 Cco02g0151 170908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco02g0151 464 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 222 453 IPR005691 -
Cco02g0151 464 Pfam Chloroplast import apparatus Tic20-like 284 449 IPR005691 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco02g0151 Cco-Chr2:1553789 Cco06g0289 Cco-Chr6:3226530 2.40E-45 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco02g0151 - - - 0.0