Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco02g0214 | ATGTCAATGAAGGTCACCATGACCTCCGGCGGAATGCCTTCCATACCTTCATCGATTTCGCCGCCGCCGGTCACTTTACCGCTCAGAAATATCCCCGGCAGCTACGGTTTGCCGCTGTTCGGATCCATCGGTGACCGGCTGGATTACTTCTGGTTTCAAGGACCCGAGAAGTTCTTCAGGTCTCGGATGGAGAAGAATCAAAGTACGGTTTTCAGAACGAATGTTCCTCCGTCGTTCCCTTTCTTCTCCACCGATCCGAGAGTGATCGCGGTTCTGGATTGCAAGTCGTTTGCGCATCTATTCGACATGGAAATCGTGGAGAAGAAGAATGTTCTGGTCGGTGATTTCATGCCGAGCACAAGTTTCACCGGAAATATGAGAGTCTGTGCGTATTTGGATACGTCGGAATCTCAACACTCGAAGATAAAAAACTTCGTCATGGACGTTCTGCGGCGGAGCTCGAGGATTTGGATACAGGAGTTGGAATCGAACCTATCGACGATGTGGGACAGCATTGAATCCGAAATCGCAAAGGACACAAAATCCAGCTTCAGAAACCATCTCCAACCAACTCTTTTCAATTTCTTCTCCAAAACCCTGGTCGGCGCCGACACTGCAAGATCACCGGAAGTGGCTAAATCCGGCTACATCGACGTTGTAATTTGGTTGGGGCTCCAGCTGGTCCCCACCATCCACATCGGCATTCTCCAACCCCTGGAAGAAATATTCCTCCACTCTTTCCGATTACCCTTCTTCCCCATCGCCTCTCGCTACCAAAGACTGTACGATTTCATCCAAAAAGAAGGGGAAGAAGTGGTTGAGCGAGGCGTTTCGGAGTTCGGGTTGACGAAGGATGAAGCAATTCACAATCTCATCTTCACCATGGGATTCAACGCCTACGGTGGTTTCAGTCTCTTCTTCCCGGTTCTACTCGATCGGATACTCAACGACAAAACCGGTTTACAACAGAGAATCCTCGAGGAAGTCAAGGCAAAAACCGGCTCCGGTCTGACATTCGAGTCAGTCAAGGAGATGGATCTCATCTACTCCATCGTTTACGAGACACTCCGGCTTGACCCGCCGGTTCCGACCCAATACGCGAGAGCCAGAAAGGATTTCAAGCTAAGTTCCTACGATTCGGCGTATAGCATCAAGAAAGGGGAGCTGCTTTGTGGGTATCAGCCGCTGGTGATGAGAGACCCGAAGGTGTTCGATGAACCGGAGACGTTTAATCCGGACCGGTTCCGGGGAGAGAAAGGGGCGGCGCTGCTGGATTATTTGTTCTGGTCGAACGGGCCGCAGACGGGACTGCCGAGCGAGCATAACAAGCAGTGCGCCGGGAAGGATTTGGTGGTGCTGACGGCGGTGGTGTTCGTGGCTTACATATTTCGAAGGTATGATTGGATTGCAGGGGAAGGAGGTTCGATTACAGCTCTTCAAAGGGCCGATTTGAAGTGA | 1458 | 51.23 | MSMKVTMTSGGMPSIPSSISPPPVTLPLRNIPGSYGLPLFGSIGDRLDYFWFQGPEKFFRSRMEKNQSTVFRTNVPPSFPFFSTDPRVIAVLDCKSFAHLFDMEIVEKKNVLVGDFMPSTSFTGNMRVCAYLDTSESQHSKIKNFVMDVLRRSSRIWIQELESNLSTMWDSIESEIAKDTKSSFRNHLQPTLFNFFSKTLVGADTARSPEVAKSGYIDVVIWLGLQLVPTIHIGILQPLEEIFLHSFRLPFFPIASRYQRLYDFIQKEGEEVVERGVSEFGLTKDEAIHNLIFTMGFNAYGGFSLFFPVLLDRILNDKTGLQQRILEEVKAKTGSGLTFESVKEMDLIYSIVYETLRLDPPVPTQYARARKDFKLSSYDSAYSIKKGELLCGYQPLVMRDPKVFDEPETFNPDRFRGEKGAALLDYLFWSNGPQTGLPSEHNKQCAGKDLVVLTAVVFVAYIFRRYDWIAGEGGSITALQRADLK | 485 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 2061968 | 2070929 | - | CcPI632755_02g002140.1 | Cco02g0214 | 170971 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco02g0214 | 485 | PRINTS | E-class P450 group IV signature | 345 | 361 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco02g0214 | 485 | PRINTS | E-class P450 group IV signature | 382 | 396 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco02g0214 | 485 | PRINTS | E-class P450 group IV signature | 398 | 416 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco02g0214 | 485 | PRINTS | E-class P450 group IV signature | 445 | 463 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco02g0214 | 485 | PANTHER | CYTOCHROME P450 26 | 31 | 466 | - | GO:0016125(PANTHER)|GO:0016491(PANTHER) | |
Cco02g0214 | 485 | Pfam | Cytochrome P450 | 320 | 470 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco02g0214 | 485 | CDD | CYP74 | 60 | 475 | - | - | |
Cco02g0214 | 485 | Gene3D | Cytochrome P450 | 26 | 482 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco02g0214 | 485 | FunFam | Allene oxide synthase, chloroplastic | 26 | 484 | - | - | |
Cco02g0214 | 485 | SUPERFAMILY | Cytochrome P450 | 26 | 473 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco02g0214 | Cco-Chr2:2061968 | Cco08g1726 | Cco-Chr8:28558404 | 2.80E-105 | dispersed | |
Cco02g0214 | Cco-Chr2:2061968 | Cco02g0597 | Cco-Chr2:5813008 | 2.70E-111 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco02g0214 | K10528 | - | csv:101223126 | 847.81 |