Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco02g0214 ATGTCAATGAAGGTCACCATGACCTCCGGCGGAATGCCTTCCATACCTTCATCGATTTCGCCGCCGCCGGTCACTTTACCGCTCAGAAATATCCCCGGCAGCTACGGTTTGCCGCTGTTCGGATCCATCGGTGACCGGCTGGATTACTTCTGGTTTCAAGGACCCGAGAAGTTCTTCAGGTCTCGGATGGAGAAGAATCAAAGTACGGTTTTCAGAACGAATGTTCCTCCGTCGTTCCCTTTCTTCTCCACCGATCCGAGAGTGATCGCGGTTCTGGATTGCAAGTCGTTTGCGCATCTATTCGACATGGAAATCGTGGAGAAGAAGAATGTTCTGGTCGGTGATTTCATGCCGAGCACAAGTTTCACCGGAAATATGAGAGTCTGTGCGTATTTGGATACGTCGGAATCTCAACACTCGAAGATAAAAAACTTCGTCATGGACGTTCTGCGGCGGAGCTCGAGGATTTGGATACAGGAGTTGGAATCGAACCTATCGACGATGTGGGACAGCATTGAATCCGAAATCGCAAAGGACACAAAATCCAGCTTCAGAAACCATCTCCAACCAACTCTTTTCAATTTCTTCTCCAAAACCCTGGTCGGCGCCGACACTGCAAGATCACCGGAAGTGGCTAAATCCGGCTACATCGACGTTGTAATTTGGTTGGGGCTCCAGCTGGTCCCCACCATCCACATCGGCATTCTCCAACCCCTGGAAGAAATATTCCTCCACTCTTTCCGATTACCCTTCTTCCCCATCGCCTCTCGCTACCAAAGACTGTACGATTTCATCCAAAAAGAAGGGGAAGAAGTGGTTGAGCGAGGCGTTTCGGAGTTCGGGTTGACGAAGGATGAAGCAATTCACAATCTCATCTTCACCATGGGATTCAACGCCTACGGTGGTTTCAGTCTCTTCTTCCCGGTTCTACTCGATCGGATACTCAACGACAAAACCGGTTTACAACAGAGAATCCTCGAGGAAGTCAAGGCAAAAACCGGCTCCGGTCTGACATTCGAGTCAGTCAAGGAGATGGATCTCATCTACTCCATCGTTTACGAGACACTCCGGCTTGACCCGCCGGTTCCGACCCAATACGCGAGAGCCAGAAAGGATTTCAAGCTAAGTTCCTACGATTCGGCGTATAGCATCAAGAAAGGGGAGCTGCTTTGTGGGTATCAGCCGCTGGTGATGAGAGACCCGAAGGTGTTCGATGAACCGGAGACGTTTAATCCGGACCGGTTCCGGGGAGAGAAAGGGGCGGCGCTGCTGGATTATTTGTTCTGGTCGAACGGGCCGCAGACGGGACTGCCGAGCGAGCATAACAAGCAGTGCGCCGGGAAGGATTTGGTGGTGCTGACGGCGGTGGTGTTCGTGGCTTACATATTTCGAAGGTATGATTGGATTGCAGGGGAAGGAGGTTCGATTACAGCTCTTCAAAGGGCCGATTTGAAGTGA 1458 51.23 MSMKVTMTSGGMPSIPSSISPPPVTLPLRNIPGSYGLPLFGSIGDRLDYFWFQGPEKFFRSRMEKNQSTVFRTNVPPSFPFFSTDPRVIAVLDCKSFAHLFDMEIVEKKNVLVGDFMPSTSFTGNMRVCAYLDTSESQHSKIKNFVMDVLRRSSRIWIQELESNLSTMWDSIESEIAKDTKSSFRNHLQPTLFNFFSKTLVGADTARSPEVAKSGYIDVVIWLGLQLVPTIHIGILQPLEEIFLHSFRLPFFPIASRYQRLYDFIQKEGEEVVERGVSEFGLTKDEAIHNLIFTMGFNAYGGFSLFFPVLLDRILNDKTGLQQRILEEVKAKTGSGLTFESVKEMDLIYSIVYETLRLDPPVPTQYARARKDFKLSSYDSAYSIKKGELLCGYQPLVMRDPKVFDEPETFNPDRFRGEKGAALLDYLFWSNGPQTGLPSEHNKQCAGKDLVVLTAVVFVAYIFRRYDWIAGEGGSITALQRADLK 485
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2061968 2070929 - CcPI632755_02g002140.1 Cco02g0214 170971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco02g0214 485 PRINTS E-class P450 group IV signature 345 361 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco02g0214 485 PRINTS E-class P450 group IV signature 382 396 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco02g0214 485 PRINTS E-class P450 group IV signature 398 416 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco02g0214 485 PRINTS E-class P450 group IV signature 445 463 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco02g0214 485 PANTHER CYTOCHROME P450 26 31 466 - GO:0016125(PANTHER)|GO:0016491(PANTHER)
Cco02g0214 485 Pfam Cytochrome P450 320 470 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco02g0214 485 CDD CYP74 60 475 - -
Cco02g0214 485 Gene3D Cytochrome P450 26 482 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco02g0214 485 FunFam Allene oxide synthase, chloroplastic 26 484 - -
Cco02g0214 485 SUPERFAMILY Cytochrome P450 26 473 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco02g0214 Cco-Chr2:2061968 Cco08g1726 Cco-Chr8:28558404 2.80E-105 dispersed
Cco02g0214 Cco-Chr2:2061968 Cco02g0597 Cco-Chr2:5813008 2.70E-111 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco02g0214 K10528 - csv:101223126 847.81