Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco02g0322 | ATGGGAGCTCATTCCCACGGCGGTCGAAAACCGGCCAATATCATCACTGATTCTCACCATGAATTCCTCCGACTGTTTCTCGAAAGTGAAGAGGAGTTTACGGAAGATGCCATCTTTTACTCGTATACAAGACACATCAATGGCTTTGCAGCAATGTTGGAAGATGAAGTTGCTGCTCAATTAGCTAAGCACCCGAAAGTGGTGTCGATTTTTTTGAACAGAGGAAGAAAGTTACACACAACAAGATCATGGGAGTTCATGGCAATGGAGAACAACAATGGACTTATCACTTCAGAATCAATATGGAAGAAGGCAAGATTTGGAGAAGACACCATTATTGGAAACCTTGATACTGGGGTGTGGCCAGAATCAAAGAGCTTTAGTGATTATGATGATTTGGGACCAATTCCTCTTAAGTGGAGAGGAATCTGCCAAAACCAAAATGATCCTTCTTTCCATTGCAATAGGAAACTAATCGGAGCAAGATACTTCAACAAAGGCTATGAATCCGTCGTCGGACCTCTCAATTCTTCGTTCAATTCGCCGAGGGACAAAGAAGGGCATGGTTCTCATACCTTGTCCACGGCGGGCGGTAACTTCGTCGCCGGAGCTAGCGTTTTCGGCTTGGGGAATGGCACCGCCAAGGGCGGATCACCTAGGGCTCGCGTGGCCGCTTACAAGGTCTGCTGGCCTCCAGCGGCCGGAAATGAGTGCTTCGATGCCGATATATTGGCGGCGTTTGATTTGGCGATCCACGACGGTGTCGACGTGTTGTCGGTGTCGCTTGGAGGAGATCCAAATCCGTTGTTTAACGATAGTGTAGCCATTGGCTCATTCCACGCCGTGAAGCATGGGATTGTTGTGATTTGCTCTGCCGGAAATTCGGGACCGGCAGCCGGTTCGGTAACCAATATTGCGCCCTGGCAAATCACCGTCGGAGCCAGCACCATGGACAGGAAGTTCCCTAGTCTTGTCGTTCTTGGGAACAAGAAGCAGATTGAGGGTGAAAGCCTGTCTCAAGAAGCTTTGCCAAGCAGGAAGTTATATCCACTCATGAGTGCTGCGGATGTTAGATTAGCCAATGCATCAGCTCATGAAGCTCAATTGTGTAAAGCTGGTACGCTTGATCCTATGAAGGCTAAGGGAAAGATTCTCGTCTGCCTTCGAGGCGATAATGCAAGAGTTGACAAGGGCGAGCAAGCACTGTTGGCTGGTGCCGTGGGCATGATTCTCGCCAATAATGAGCCTAGTGGGAATGAAATCCTTGCTGACCCACATGTCCTTCCAGCCTCGCACATAAACTTCACTGATGGCACTTCGGTCTTTGCATACATCAATTCAACCAAGTTCCCTGGGGCTTATATCACACGAGCTACAACTCAATTAGGTATAAGGCCAGCTCCATTTATGGCAGCATTTTCATCAGTGGGGCCAAACACTATTACTCCAGAGATCTTAAAGCCTGATATTACAGCTCCTGGGCTGAGTGTTATAGCTGCTTATACTGAAGCAGAAGGCCCTACAAATCAAGAATATGATAATCGTCGGGTTCCTTTTAACTCAGTATCAGGAACTTCTATGTCATGCCCCCATGTTTCTGGTATTGCTGGTCTTCTCAGGACTCTTTACCCTCATTGGAGTCCTGCAGCTATAAAATCTGCCATCATGACCACAGCAAACACTTTGGACAACAACTTCGAGCCGCTCCTCAACGCGTCCTACTCTGTGGCCACACCATTCAACTATGGAGCAGGACACATTAATCCAAATGGTGCTACGGAACCTGGCTTGGTCTATGACATAGAGGTTAATGAGTATCTGTTATTTCTATGTGCATTAGGATATAACCAAGCTCAAATATCACAATTCTCCAATGGTCCCTTCAATTGCTCGGAGCCTATTAGTCTTACAAATCTCAACTACCCTTCAATTACTGTCCCTAAGCTCTCTAGATCGATCACAATTACTCGAAGACTTAAGAACGTTGGTTCTCCTGGAACGTACAAAGCCGAGATAAGAAAACCGGCTGGGATATCGGTTTGGGTTAAGCCAAAGACATTGAACTTCACAAGATTAGGTGAAGAGCAGAGCTTCAAAGTTTTTATGAAAGTTAAGGAACAGAATGTAGGACGGGAGAACTATGTATACGGTGATTTGATATGGTCAGATGGTAAGCACCATGTAAGAAGCCCTATTGTGGTAAAGGTAGTCTAG | 2214 | 46.48 | MGAHSHGGRKPANIITDSHHEFLRLFLESEEEFTEDAIFYSYTRHINGFAAMLEDEVAAQLAKHPKVVSIFLNRGRKLHTTRSWEFMAMENNNGLITSESIWKKARFGEDTIIGNLDTGVWPESKSFSDYDDLGPIPLKWRGICQNQNDPSFHCNRKLIGARYFNKGYESVVGPLNSSFNSPRDKEGHGSHTLSTAGGNFVAGASVFGLGNGTAKGGSPRARVAAYKVCWPPAAGNECFDADILAAFDLAIHDGVDVLSVSLGGDPNPLFNDSVAIGSFHAVKHGIVVICSAGNSGPAAGSVTNIAPWQITVGASTMDRKFPSLVVLGNKKQIEGESLSQEALPSRKLYPLMSAADVRLANASAHEAQLCKAGTLDPMKAKGKILVCLRGDNARVDKGEQALLAGAVGMILANNEPSGNEILADPHVLPASHINFTDGTSVFAYINSTKFPGAYITRATTQLGIRPAPFMAAFSSVGPNTITPEILKPDITAPGLSVIAAYTEAEGPTNQEYDNRRVPFNSVSGTSMSCPHVSGIAGLLRTLYPHWSPAAIKSAIMTTANTLDNNFEPLLNASYSVATPFNYGAGHINPNGATEPGLVYDIEVNEYLLFLCALGYNQAQISQFSNGPFNCSEPISLTNLNYPSITVPKLSRSITITRRLKNVGSPGTYKAEIRKPAGISVWVKPKTLNFTRLGEEQSFKVFMKVKEQNVGRENYVYGDLIWSDGKHHVRSPIVVKVV | 737 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 2939845 | 2949687 | + | CcPI632755_02g003220.1 | Cco02g0322 | 171079 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco02g0322 | 737 | Pfam | Fibronectin type-III domain | 638 | 734 | IPR041469 | - | |
Cco02g0322 | 737 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 83 | 593 | - | - | |
Cco02g0322 | 737 | FunFam | Subtilisin-like protease SBT5.3 | 1 | 79 | - | - | |
Cco02g0322 | 737 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 524 | 534 | IPR023828 | - | |
Cco02g0322 | 737 | Gene3D | Peptidase S8/S53 domain | 110 | 606 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Cco02g0322 | 737 | Pfam | Peptidase inhibitor I9 | 12 | 79 | IPR010259 | - | |
Cco02g0322 | 737 | FunFam | Subtilisin-like protease SBT1.5 | 110 | 330 | - | - | |
Cco02g0322 | 737 | FunFam | p69E protein-like | 610 | 737 | - | - | |
Cco02g0322 | 737 | CDD | PA_subtilisin_like | 325 | 455 | - | - | |
Cco02g0322 | 737 | SUPERFAMILY | PA domain | 377 | 452 | IPR046450 | - | |
Cco02g0322 | 737 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 30 | 733 | IPR045051 | - | |
Cco02g0322 | 737 | FunFam | subtilisin-like protease SBT1.5 | 318 | 462 | - | - | |
Cco02g0322 | 737 | CDD | Peptidases_S8_3 | 77 | 560 | IPR034197 | - | |
Cco02g0322 | 737 | Gene3D | - | 318 | 462 | - | - | |
Cco02g0322 | 737 | Pfam | PA domain | 366 | 439 | IPR003137 | - | |
Cco02g0322 | 737 | SUPERFAMILY | Subtilisin-like | 101 | 597 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Cco02g0322 | 737 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 1 | 79 | IPR037045 | - | |
Cco02g0322 | 737 | PRINTS | Subtilisin serine protease family (S8) signature | 108 | 127 | IPR015500 | - | |
Cco02g0322 | 737 | PRINTS | Subtilisin serine protease family (S8) signature | 184 | 197 | IPR015500 | - | |
Cco02g0322 | 737 | PRINTS | Subtilisin serine protease family (S8) signature | 523 | 539 | IPR015500 | - | |
Cco02g0322 | 737 | Pfam | Subtilase family | 108 | 562 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
Cco02g0322 | 737 | Gene3D | - | 610 | 737 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco01g1244 | Cco-Chr1:19124208 | Cco02g0322 | Cco-Chr2:2939845 | 2.80E-169 | dispersed | |
Cco01g1247 | Cco-Chr1:19197219 | Cco02g0322 | Cco-Chr2:2939845 | 3.80E-245 | dispersed | |
Cco02g0322 | Cco-Chr2:2939845 | Cco10g0393 | Cco-Chr10:4601647 | 3.50E-248 | dispersed | |
Cco02g0322 | Cco-Chr2:2939845 | Cco08g1821 | Cco-Chr8:29245173 | 7.70E-171 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco02g0322 | - | - | - | 0.0 |