Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco02g0352 ATGAGAGAGGTTGAAGGAAGAAGGGTTTGTCAGGAGTTTTCAGCTGGGTATTATGGTCTTTGTGCTGTTGGAGGAATGCTCAGTGCTGGGACAACCCATCTTGCTATTACACCTCTTGATGTATTGAAGGTCAATATGCAGGTTAATCCAATCAAGTACAATGGCATTTCTTCTGGTTTTTCTACTCTTTGGAGGGAACAAGGTCCATCATCCCTTTGGAGAGGTTGGTCGGGCAAGTTATTTGGGTACGGTGTTCAAGGCGGGTTCAAATTTGGTCTCTATGAGTACTTTAAGAAGTTTTACTCTGATTTTCTGGAAGGCCATAGGAGAAGTTCCATATACTTTCTCAGCAGTGCTTCTGCTCAAGTTTTTGCTGATATTGCTCTCTGCCCCTTTGAAGCTGTCAAGGTCAGAGTCCAGGCACAACCCTATTACGCCAAAGGGTTGGCCGATGGGTTTCCAAAGTTATACTATAGTGAGGGTCTTTCGGGTTTCTACAGAGGGCTTTTTCCACTTTGGGGAAGAAATCTTCCATTCTCCATGATTATGTTCTCAACATTTGAGCATTCAGTGAACTTCATATATCAAAATATCATTCAGCGTAGGAAGGAAGATTGCTCGAGAACCCAACAGCTCGGCGTTACATGTTTAGCTGGCTATACAGCTGGAGCTGTTGGTACTTTTGTCTCAAATCCAGCTGATAACATTGTTTCCTCTCTGTATAATAAGAAGGCTGATAATATACTGCAGGCAGTGAAGAAGATAGGATTTGGCAATCTATTTATTAGAAGCCTTCCTGTCAGAATTACAATTGTTGGTCCTGTTATTACTTTGCAGTGGTTCTTCTATGACACCATAAAAGTGCTAAGTGGACTGCCTACAAGTGGAGGGCTCAACAGGCAATTGGAAGAAGCAAAACAATCATCATAG 930 42.37 MREVEGRRVCQEFSAGYYGLCAVGGMLSAGTTHLAITPLDVLKVNMQVNPIKYNGISSGFSTLWREQGPSSLWRGWSGKLFGYGVQGGFKFGLYEYFKKFYSDFLEGHRRSSIYFLSSASAQVFADIALCPFEAVKVRVQAQPYYAKGLADGFPKLYYSEGLSGFYRGLFPLWGRNLPFSMIMFSTFEHSVNFIYQNIIQRRKEDCSRTQQLGVTCLAGYTAGAVGTFVSNPADNIVSSLYNKKADNILQAVKKIGFGNLFIRSLPVRITIVGPVITLQWFFYDTIKVLSGLPTSGGLNRQLEEAKQSS 309
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3207823 3213303 - CcPI632755_02g003520.1 Cco02g0352 171109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco02g0352 309 Pfam Mitochondrial carrier protein 113 195 IPR018108 -
Cco02g0352 309 Pfam Mitochondrial carrier protein 21 103 IPR018108 -
Cco02g0352 309 SUPERFAMILY Mitochondrial carrier 20 285 IPR023395 -
Cco02g0352 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 16 100 IPR018108 -
Cco02g0352 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 193 IPR018108 -
Cco02g0352 309 FunFam Mitochondrial phosphate carrier protein 1, mitochondrial 19 290 - -
Cco02g0352 309 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 8 298 IPR044677 GO:0005315(InterPro)|GO:0005315(PANTHER)|GO:0031305(PANTHER)|GO:0035435(PANTHER)|GO:1990547(InterPro)
Cco02g0352 309 Gene3D Mitochondrial carrier domain 21 289 IPR023395 -
Cco02g0352 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 210 289 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco02g0352 Cco-Chr2:3207823 Cco05g1465 Cco-Chr5:17548102 2.70E-85 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco02g0352 K15102 - csv:101219895 601.282