Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco02g0433 ATGTTATCGGAGTTGATGAACTTTTTGAGGGCCTGTTTCCAGCCGAACTCCGATCGGTATGTGGCCGGGGAAATCAGGGGGCGGCAGGATGGGCTGTTATGGTACAAAGATAGTGGACAACACTTGAATGGAGAGTTTTCAATGTCTGTGATTCAGGCCAACAATTTGCTTGAAGATCAGAGCCAGATTGAGTCTGGCAGTTTGAGCTTACACGAGTCTGGCCCCAAAGGAACATTTGTTGGTGTGTATGATGGCCATGGAGGCCCTGAGACTTCTCGGTATATCTGTGATCATCTATTCCGGCATCTCAAGAGATTTACTTCTGAGCAAGATCTAATGTCTGCTGATGTAATACGCAAGGCGTTCCAAGCAACAGAAGAGGGGTTTTTTTCAATAGTTCGAAGTCAATGGTCAACAAATCCTCAAATTGCAGCTGTTGGTTCATGCTGTCTAGTTGGTGTAATCTGTGATGGGACTCTCTATGTTGCAAATCTAGGTGATTCACGTGCTGTTTTGGGTAGAGTAGTGAAGGCAACTGGCGAGGTTCTAGCCATTCAGTTGTCAACAGAACACAATGTTTCTAACGAGTCAGTGAGGCAAGAGCTGCAGTCTTTGCACCCTGATGACTCACAAGTTGTGGTTTTAAGGCATAATGTTTGGCGAGTAAAGGGCATAATACAGATTTCGAGATCCATAGGCGATGTGTACTTGAAAAAAGCTGAGTTCAATAAAGAACCGTTGTATGCAAAGTTTCGAGTTCAAAAACCCTTCAAAAAGCCATTTTTGAGCTCTGAACCAGCCATTTCTGAGATCCAGTTGAAGCCAGATGATCAATTTGTTATATTTGCATCAGATGGGTTGTGGGAGCACCTTAGCAATCAGGAAGCAGTCGATATAGTTCATAGCCACTCTCAAAATGGAAGTGCAAGAACACTGGTCAGAGCTGCTCTTCAAGTAGCTGCAAAGAAAAGAGAAATGAGGTACTCAGATTTGAAGAAGATTGGCCGTGGCGTTCGTCGCCATTTCCACGATGACATCACTGTGGTGGTTGTGTTTCTTGATACCAATATGCTCTTCAGAGCCAGCTCCACGAAGAGCTTGAGTGTCTCACTACGAGGTGGTGGAGTCAACTGGCTTCCTAACTCTTTATCCCCCGTCACTACGCCCGTGTAG 1173 45.18 MLSELMNFLRACFQPNSDRYVAGEIRGRQDGLLWYKDSGQHLNGEFSMSVIQANNLLEDQSQIESGSLSLHESGPKGTFVGVYDGHGGPETSRYICDHLFRHLKRFTSEQDLMSADVIRKAFQATEEGFFSIVRSQWSTNPQIAAVGSCCLVGVICDGTLYVANLGDSRAVLGRVVKATGEVLAIQLSTEHNVSNESVRQELQSLHPDDSQVVVLRHNVWRVKGIIQISRSIGDVYLKKAEFNKEPLYAKFRVQKPFKKPFLSSEPAISEIQLKPDDQFVIFASDGLWEHLSNQEAVDIVHSHSQNGSARTLVRAALQVAAKKREMRYSDLKKIGRGVRRHFHDDITVVVVFLDTNMLFRASSTKSLSVSLRGGGVNWLPNSLSPVTTPV 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3904189 3907472 - CcPI632755_02g004330.1 Cco02g0433 171190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco02g0433 390 SUPERFAMILY PP2C-like 49 354 IPR036457 -
Cco02g0433 390 ProSiteProfiles PPM-type phosphatase domain profile. 42 353 IPR001932 -
Cco02g0433 390 CDD PP2Cc 46 353 IPR001932 -
Cco02g0433 390 Gene3D - 31 361 IPR036457 -
Cco02g0433 390 PANTHER PROTEIN PHOSPHATASE 37 352 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cco02g0433 390 FunFam Phosphatase 2C family protein 34 363 - -
Cco02g0433 390 ProSitePatterns PPM-type phosphatase domain signature. 79 87 IPR000222 GO:0043169(InterPro)
Cco02g0433 390 SMART PP2C_4 37 351 IPR001932 -
Cco02g0433 390 Pfam Protein phosphatase 2C 70 318 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco02g0433 Cco-Chr2:3904189 Cco04g1830 Cco-Chr4:33120802 5.40E-163 dispersed
Cco05g1071 Cco-Chr5:9551103 Cco02g0433 Cco-Chr2:3904189 7.40E-14 transposed
Cco02g0433 Cco-Chr2:3904189 Cco02g1308 Cco-Chr2:24825880 1.20E-157 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco02g0433 - - - 0.0