Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco02g0474 ATGAATCCCATTTCCCTGTTTATGCAACTCTTTCCATTCCCATGTTGGAAGCTTCTTACTGAGCTCTTCACCACCCCCATTACGGCGAAATTCGCTGAGAGTTTAGGTTCTCTGGAAATGTCGAATTCCTCTTCGAACTTGACCCAGAGCCAGAATGGGAATGTTAAAAACAATGATGCTTTATTCACAGTGGATGAGATTGAAGAAAGTGAGTTTGCGAAGCTATTGGATAGGCCAAGGCCGTTGAACATTGAGAGGCAGAGGTCGTTTGATGAAAGATCGCTTGGGGATTTGGCGATTGGTTTTTCCCCACGGCTATCGACGAGAGTTTCTTCAGAGAACTTTGGTCGATTGACTGATTATTATGATCAAACTCCATCCCCCGGCAGAAAATCGGATTTCAATACTCCAAGATCACAGACTGGATTCGAGCAGCATCCTATGGTGGCTGAAGCTTGGGAAGCTTTGAGGCGTTCGTTGGTCCATTTCCGTGGCCAACCAGTTGGTACTATTGCTGCGTTGGACTGTACTGAAGAAAATCTTAATTATGATCAAGTGTTTGTGAGAGACTTCGTCCCGAGCGCATTTGCTTTTCTAATGAATGGGGAGCCTGAAATAGTAAAAAACTTTATCTTAAAAACTCTTCGGCTTCAGTCATGGGAGAAAAAGATTGACAGATTCCAGCTTGGAGAAGGGGTGATGCCTGCTAGTTTCAAAGTGCTTCATGATCCAGTGAGGAACACTGAAACTTTAATTGCAGATTTTGGAGAGAGTGCAATAGGAAGAGTTGCTCCGGTTGACTCTGGATTTTGGTGGATTATATTGCTTAGAGCATACACAAAGTCCACTGGTGATACTTCCTTGGCTGAACTGCCAGAATGCCAAAAGGGAATGCGCCTTATTTTGAGTCTGTGTCTTTCAGAAGGGTTTGACACATTCCCAACCCTTCTCTGTGCTGATGGATGCTGCATGATTGATAGACGAATGGGTGTATATGGCTACCCAATTGAAATTCAAGCTCTTTTCTTTATGGCTTTAAGGTGTGCTTTGCTTTTACTTAAGCAAGACCACGAGGGGAAGGACTTTGTAGAAAGAATAACAAAACGGCTTCACGCCTTGAGCTATCACATGAGAACTTACTTTTGGCTCGACCTAAAGCAACTAAATGATATATACCGATATAAAACTGAAGAATACTCTCACACTGCTTTGAACAAGTTCAATGTAATACCCGATTCTCTTCCCGAATGGATTTTTGACTTCATGCCAACTCGTGGTGGTTACTTTATTGGAAACGTCAGCCCTGCAAGAATGGATTTCCGTTGGTTTTGCTTGGGAAACTGCATTGCAATTCTTTCTGCCTTGGCAACACCAGAGCAGTCCACTGCCATTATGGATCTTATTGAATCACGTTGGGAAGAGCTGGTCGGAGAAATGCCTCTAAAGGTTTGTTACCCTGCCATTGAAAGTCACGAGTGGCGGATTGTAACTGGGTGTGATCCAAAAAATACAAGATGGAGTTACCACAATGGTGGTTCTTGGCCAGTTCTCCTATGGCTTCTAACAGCTGCATGTATCAAGACCGGGCGACCCCAGATTGCGAGACGCGCACTCGAACTGGCTGAAACCAGGCTACTGAAAGACAACTGGCCAGAATATTATGATGGGACAGTTGGGCGGTACATTGGGAAACAGGCACGAAAGTTTCAGACGTGGTCGATTGCAGGTTATTTAGTGGCAAAGATGATGCTGGAAGACCCATCTCATTCAGGCATGGTGTCCTTGGAGGAAGACAAGCAGATGAAACCTGTAATGAAAAGAGAAACTGACCACCAACAGAACATGACACATTCCCGACCGATTATGGTCGATTCAGTTGGTTTCGACTTGTTGGATATGTTTTCGGTGCCTTCATATTGTTATGATCCCTTCGATCCTAATGGAAACATTACCATTACTTATGATATTCAAACTTGGACCACTCGTGGATATGTGGGGAGGGTCACTGTCCAAAACTACTACCAGTTTCGGCATGTGGAGAAGCCTGGTTGGAGGCTTGGGTGGACATGGACGAGGGGTGAAGTCATCTGGTCAATGAGTGGAGCTTTCGTGACTAAACAGGGAAATTGCTCATTGTTCAAATTCGATCCTCCGCATTCCTGTGAGAAGAGCCCTGTCATTCTCGATCTCGTGTCAGAGGCATCAGTGGAAAACAGGTCGGAGGGTTGTTGTCGCAGTGGGGTTCTTTCTGCTTGGGCTGTAGACCCTTCCAAATCTCTCTCTTCGTTTGAAATCTCAGTGGGGAGCATGGATGGAGATGGCAATGAGCAACCACCCGCCAATATTACTCTCATGGCGCCTGGTCCTGGTTACACTTGCAGCCCCTTCTTGGACGCTCATCCAACTGTTTCTTCTCTGATTGATGGCAAAAGACAAGTTCAGGCTTTTAGAACATGGAAATCAACATGTACTTACTCCATATTTATGTATAACAAGACACCACTCTGTTGTGTCTCACTCTCAGCATTTTACAATCCCTCCATCACACCTTGCCCTACATGCAGCTGTGGATGCAGAGAAGCAAACCAAACCACTGTTCAATGTACAAGAGACAAACTCCAGTTGTCGACCATGGAATCGGCTAATCTTCTTGCCTCAGTACAGTGCTCGGATCACATGTGTCCAGTTCGAGTGCATTGGCATGTTAAGACGAACTACATCGACCACTGGAAGGTGAAACTCACAGTTTCCAACTACAACTATGACAGAAACTACTCAAACTGGAACATCCTAGTGCAGCATCCCGGATTTAGCCAATCAACAGAAGCATTTAGTTTCAATAGTTCACAACTTCCATCCGTCAGATATGGAGATGAGTTGGCTCTCTTTTGGGGCATTGAGTATTACAACACAGAGCTTGTGCAGTCCACTGAGGGTAATGTAGGGTATGTGACAACAGATATTCTTCTTGAGAAAGATTTAGAATCATTCACATTAAGTAATGGTTGGGCCCTTCCAAGAAGAGTTTATTTCAACGGAGATAACTGTCAAATGCCTTTACCAGACACCTTCCCAATGCTACCAAATGGGAGTTCTAAGCAAAGCCTCTCACTTTTCATCTCCATTATTCTTTTTTTGAACTTTTTGTTTTGGTGA 3156 44.42 MNPISLFMQLFPFPCWKLLTELFTTPITAKFAESLGSLEMSNSSSNLTQSQNGNVKNNDALFTVDEIEESEFAKLLDRPRPLNIERQRSFDERSLGDLAIGFSPRLSTRVSSENFGRLTDYYDQTPSPGRKSDFNTPRSQTGFEQHPMVAEAWEALRRSLVHFRGQPVGTIAALDCTEENLNYDQVFVRDFVPSAFAFLMNGEPEIVKNFILKTLRLQSWEKKIDRFQLGEGVMPASFKVLHDPVRNTETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDTSLAELPECQKGMRLILSLCLSEGFDTFPTLLCADGCCMIDRRMGVYGYPIEIQALFFMALRCALLLLKQDHEGKDFVERITKRLHALSYHMRTYFWLDLKQLNDIYRYKTEEYSHTALNKFNVIPDSLPEWIFDFMPTRGGYFIGNVSPARMDFRWFCLGNCIAILSALATPEQSTAIMDLIESRWEELVGEMPLKVCYPAIESHEWRIVTGCDPKNTRWSYHNGGSWPVLLWLLTAACIKTGRPQIARRALELAETRLLKDNWPEYYDGTVGRYIGKQARKFQTWSIAGYLVAKMMLEDPSHSGMVSLEEDKQMKPVMKRETDHQQNMTHSRPIMVDSVGFDLLDMFSVPSYCYDPFDPNGNITITYDIQTWTTRGYVGRVTVQNYYQFRHVEKPGWRLGWTWTRGEVIWSMSGAFVTKQGNCSLFKFDPPHSCEKSPVILDLVSEASVENRSEGCCRSGVLSAWAVDPSKSLSSFEISVGSMDGDGNEQPPANITLMAPGPGYTCSPFLDAHPTVSSLIDGKRQVQAFRTWKSTCTYSIFMYNKTPLCCVSLSAFYNPSITPCPTCSCGCREANQTTVQCTRDKLQLSTMESANLLASVQCSDHMCPVRVHWHVKTNYIDHWKVKLTVSNYNYDRNYSNWNILVQHPGFSQSTEAFSFNSSQLPSVRYGDELALFWGIEYYNTELVQSTEGNVGYVTTDILLEKDLESFTLSNGWALPRRVYFNGDNCQMPLPDTFPMLPNGSSKQSLSLFISIILFLNFLFW 1051
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4279807 4289697 + CcPI632755_02g004740.1 Cco02g0474 171231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco02g0474 1051 Pfam COBRA-like protein 664 826 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Cco02g0474 1051 PANTHER - 127 607 IPR024746 GO:0004575(PANTHER)|GO:0005987(PANTHER)|GO:0033926(InterPro)
Cco02g0474 1051 Gene3D - 177 582 IPR012341 GO:0005975(InterPro)
Cco02g0474 1051 FunFam probable alkaline/neutral invertase B 177 580 - -
Cco02g0474 1051 MobiDBLite consensus disorder prediction 120 141 - -
Cco02g0474 1051 SUPERFAMILY Six-hairpin glycosidases 152 580 IPR008928 GO:0005975(InterPro)
Cco02g0474 1051 Pfam Alkaline and neutral invertase 152 587 IPR024746 GO:0033926(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco02g0474 Cco-Chr2:4279807 Cco09g1004 Cco-Chr9:9572782 2.10E-270 dispersed
Cco02g0474 Cco-Chr2:4279807 Cco07g1675 Cco-Chr7:30751789 3.70E-118 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco02g0474 - - - 0.0