Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco02g0598 ATGGCTTCTCCTTCTTCTTCCTCGGAACTTCCTCTCAAACCCATTCCCGGGGGCTATGGCTTCTCCTTCCTCGGCCCGATCAAAGACCGTTATGACTATTTCTACTTCCAAGGCAAAGATGAATTTTTCCGTTCCCGAATGACCAAATATCGCTCCACCGTCTTCCGCGCCAACATGCCGCCGGGCCCCTTCATCTCCTCCGATTCCAGAGTCGTCGTACTTCTCGACGCCATCAGTTTTCCGATCCTCTTCGACACCACCAAGGTCGAAAAACGCAACATTCTCGATGGAACTTACATGCCCTCCTTGTCCTTCACCGGCGGCATTCGCACCTGCGCTTATTTGGACCCATCGGAAACAGAGCACTCTGTTCTCAAACGCCTCTTCCTCTCGTTTCTCGCCTCTCGTCATGACAGGTTCATCCCTCTGTTTCGAAGCTCCTTGTCTGAGATGTTCGTTAAGCTTGAAGATAAACTCGCGGAGAAGAAGAAATTCGCCGATTTCAACCCGATTAGTGATTCCATGTCGTTTGATTACATTTTCCGTCTACTCTCCGATGGAACTCCTGATTCAAAATTAGCCGCCGATGGACCTGGAATGTTCGATTTATGGCTTGCCTTCCAGCTTGCCCCACTGGCTTCCATTGGGGTTCCGAAAATTTTCACAGTTTTTGAAGATCTCATCATTCATACCATTCCCCTGCCTTTTTTTCCAGTCAAAAGTGGTTATAGGAAGCTTTACAATGCGTTTTACTCCTCCTCTGGAACATTTCTAGACGAAGCAGAAAAACAGGGGATAGACAGAGAGAAAGCGTGTCACAATTTAGTGTTTCTCGCCGGATTCAACGCCTACGGCGGAATGAAAGTGCTTTTTCCAACTTTACTAAAATGGGTAGGCACCGCCGGCGAGGATCTCCACCGGAAGATCGCTGACGAAGTCAGAGCCACCGTGAAGGAAGAAGGTGGATTGACTTTCGCCGCCTTGGAGAAAATGAGTCTGCTGAAATCCGTCGTGTACGAGGCTCTGAGGATCGAGCCGCCGGTGCCGTTCCAGTATGGGAAGGCGAAGGAGGACATCGTGATTCAGAGCCATGATTCTTCTTTCAAGATCACGAAAGGGGAGACGATTTTTGGTTATCAGCCATTTGCTACTAAAGATCCGAAGATTTTTGAGAATTCGGAGAAGTTCGTCGGTGATAGGTTCGTCGGAGAAGAAGGGGAGAAGCTTCTGAAATATGTTTACTGGTCAAACGACCGGGAGACGGTGGAGCCAACGGCGGAGAACAAGCAGTGTCCGGGGAAGAATCTGGTGGTGCTGATGGGCAGGATTATTCTGGTGGAATTCTTCCTCCGGTATGATACATTCACTGTCGACGTCACAGAGTTGCCGCTCGGTCCGGCGGTGAAGTTCAAGTCTCTAACCAAAGCCACCGAGTGA 1437 49.62 MASPSSSSELPLKPIPGGYGFSFLGPIKDRYDYFYFQGKDEFFRSRMTKYRSTVFRANMPPGPFISSDSRVVVLLDAISFPILFDTTKVEKRNILDGTYMPSLSFTGGIRTCAYLDPSETEHSVLKRLFLSFLASRHDRFIPLFRSSLSEMFVKLEDKLAEKKKFADFNPISDSMSFDYIFRLLSDGTPDSKLAADGPGMFDLWLAFQLAPLASIGVPKIFTVFEDLIIHTIPLPFFPVKSGYRKLYNAFYSSSGTFLDEAEKQGIDREKACHNLVFLAGFNAYGGMKVLFPTLLKWVGTAGEDLHRKIADEVRATVKEEGGLTFAALEKMSLLKSVVYEALRIEPPVPFQYGKAKEDIVIQSHDSSFKITKGETIFGYQPFATKDPKIFENSEKFVGDRFVGEEGEKLLKYVYWSNDRETVEPTAENKQCPGKNLVVLMGRIILVEFFLRYDTFTVDVTELPLGPAVKFKSLTKATE 478
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5822504 5826041 - CcPI632755_02g005980.1 Cco02g0598 171355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco02g0598 478 CDD CYP74 44 471 - -
Cco02g0598 478 Pfam Cytochrome P450 305 415 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco02g0598 478 PANTHER CYTOCHROME P450 26 15 452 - GO:0016125(PANTHER)|GO:0016491(PANTHER)
Cco02g0598 478 PRINTS E-class P450 group IV signature 431 449 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco02g0598 478 PRINTS E-class P450 group IV signature 331 347 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco02g0598 478 PRINTS E-class P450 group IV signature 384 402 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco02g0598 478 FunFam Allene oxide synthase, chloroplastic 10 478 - -
Cco02g0598 478 Gene3D Cytochrome P450 10 478 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco02g0598 478 SUPERFAMILY Cytochrome P450 11 464 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco02g0598 Cco-Chr2:5822504 Cco08g1726 Cco-Chr8:28558404 9.50E-146 dispersed
Cco02g0597 Cco-Chr2:5813008 Cco02g0598 Cco-Chr2:5822504 1.30E-211 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco02g0598 K01723 - csv:101211324 882.863