Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco02g0598 | ATGGCTTCTCCTTCTTCTTCCTCGGAACTTCCTCTCAAACCCATTCCCGGGGGCTATGGCTTCTCCTTCCTCGGCCCGATCAAAGACCGTTATGACTATTTCTACTTCCAAGGCAAAGATGAATTTTTCCGTTCCCGAATGACCAAATATCGCTCCACCGTCTTCCGCGCCAACATGCCGCCGGGCCCCTTCATCTCCTCCGATTCCAGAGTCGTCGTACTTCTCGACGCCATCAGTTTTCCGATCCTCTTCGACACCACCAAGGTCGAAAAACGCAACATTCTCGATGGAACTTACATGCCCTCCTTGTCCTTCACCGGCGGCATTCGCACCTGCGCTTATTTGGACCCATCGGAAACAGAGCACTCTGTTCTCAAACGCCTCTTCCTCTCGTTTCTCGCCTCTCGTCATGACAGGTTCATCCCTCTGTTTCGAAGCTCCTTGTCTGAGATGTTCGTTAAGCTTGAAGATAAACTCGCGGAGAAGAAGAAATTCGCCGATTTCAACCCGATTAGTGATTCCATGTCGTTTGATTACATTTTCCGTCTACTCTCCGATGGAACTCCTGATTCAAAATTAGCCGCCGATGGACCTGGAATGTTCGATTTATGGCTTGCCTTCCAGCTTGCCCCACTGGCTTCCATTGGGGTTCCGAAAATTTTCACAGTTTTTGAAGATCTCATCATTCATACCATTCCCCTGCCTTTTTTTCCAGTCAAAAGTGGTTATAGGAAGCTTTACAATGCGTTTTACTCCTCCTCTGGAACATTTCTAGACGAAGCAGAAAAACAGGGGATAGACAGAGAGAAAGCGTGTCACAATTTAGTGTTTCTCGCCGGATTCAACGCCTACGGCGGAATGAAAGTGCTTTTTCCAACTTTACTAAAATGGGTAGGCACCGCCGGCGAGGATCTCCACCGGAAGATCGCTGACGAAGTCAGAGCCACCGTGAAGGAAGAAGGTGGATTGACTTTCGCCGCCTTGGAGAAAATGAGTCTGCTGAAATCCGTCGTGTACGAGGCTCTGAGGATCGAGCCGCCGGTGCCGTTCCAGTATGGGAAGGCGAAGGAGGACATCGTGATTCAGAGCCATGATTCTTCTTTCAAGATCACGAAAGGGGAGACGATTTTTGGTTATCAGCCATTTGCTACTAAAGATCCGAAGATTTTTGAGAATTCGGAGAAGTTCGTCGGTGATAGGTTCGTCGGAGAAGAAGGGGAGAAGCTTCTGAAATATGTTTACTGGTCAAACGACCGGGAGACGGTGGAGCCAACGGCGGAGAACAAGCAGTGTCCGGGGAAGAATCTGGTGGTGCTGATGGGCAGGATTATTCTGGTGGAATTCTTCCTCCGGTATGATACATTCACTGTCGACGTCACAGAGTTGCCGCTCGGTCCGGCGGTGAAGTTCAAGTCTCTAACCAAAGCCACCGAGTGA | 1437 | 49.62 | MASPSSSSELPLKPIPGGYGFSFLGPIKDRYDYFYFQGKDEFFRSRMTKYRSTVFRANMPPGPFISSDSRVVVLLDAISFPILFDTTKVEKRNILDGTYMPSLSFTGGIRTCAYLDPSETEHSVLKRLFLSFLASRHDRFIPLFRSSLSEMFVKLEDKLAEKKKFADFNPISDSMSFDYIFRLLSDGTPDSKLAADGPGMFDLWLAFQLAPLASIGVPKIFTVFEDLIIHTIPLPFFPVKSGYRKLYNAFYSSSGTFLDEAEKQGIDREKACHNLVFLAGFNAYGGMKVLFPTLLKWVGTAGEDLHRKIADEVRATVKEEGGLTFAALEKMSLLKSVVYEALRIEPPVPFQYGKAKEDIVIQSHDSSFKITKGETIFGYQPFATKDPKIFENSEKFVGDRFVGEEGEKLLKYVYWSNDRETVEPTAENKQCPGKNLVVLMGRIILVEFFLRYDTFTVDVTELPLGPAVKFKSLTKATE | 478 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 5822504 | 5826041 | - | CcPI632755_02g005980.1 | Cco02g0598 | 171355 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco02g0598 | 478 | CDD | CYP74 | 44 | 471 | - | - | |
Cco02g0598 | 478 | Pfam | Cytochrome P450 | 305 | 415 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco02g0598 | 478 | PANTHER | CYTOCHROME P450 26 | 15 | 452 | - | GO:0016125(PANTHER)|GO:0016491(PANTHER) | |
Cco02g0598 | 478 | PRINTS | E-class P450 group IV signature | 431 | 449 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco02g0598 | 478 | PRINTS | E-class P450 group IV signature | 331 | 347 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco02g0598 | 478 | PRINTS | E-class P450 group IV signature | 384 | 402 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco02g0598 | 478 | FunFam | Allene oxide synthase, chloroplastic | 10 | 478 | - | - | |
Cco02g0598 | 478 | Gene3D | Cytochrome P450 | 10 | 478 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco02g0598 | 478 | SUPERFAMILY | Cytochrome P450 | 11 | 464 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco02g0598 | Cco-Chr2:5822504 | Cco08g1726 | Cco-Chr8:28558404 | 9.50E-146 | dispersed | |
Cco02g0597 | Cco-Chr2:5813008 | Cco02g0598 | Cco-Chr2:5822504 | 1.30E-211 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco02g0598 | K01723 | - | csv:101211324 | 882.863 |