Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cco02g0638 ATGGCCCCGTTTGAATTCAAATCAAACTACGGAGCTCTCTTTATTGGCGCTCGAAATTCTCTCTCAAGAGCCCATCACTGGAAAATCGAAGGGAACGAGCTTCAGTTCAGCGACGGAATCCTACAACAGAAAATGGTGGAATCGAACCTGACTTACGAGGAATGTCGACGCCAGAGGTTGGAGGAGAATAAGAAGAGGATGGAAGAGCTTAATCTGAACAAACTTGCCGATGCTCTGAAATTTTCCAGCCCTAAATCCTCTCCGACCAAACAGCTAAAGCGTCCTCGTCAGCCACTCGATAAGTCGTCTTTCAGTGTGAGAAGGTCTAGCCGTTTTGCCGATAAGCCCCCTCCGAACTATAAGGAGGTGCCCGTTGAACCACTTCCAGGTATAAGAAGGACTTATCAAAGGAGAGATTTGCTGAATCGGATTTATGCTTCACATGAAGAAAGGCAATATGCTATTGACAGAGCAAGAGACCTTCAATCTAGCCTGGAATCTAGGTACCCCAGTTTTGTGAAGCCCATGCTTCAATCACATGTCACAGGGGGATTTTGGCTGGGTCTACCAGTTCAATTTTGCAAGACACACCTTCCCCTTGAGGATGAAATGCTAACTCTGGTTGACGAGGATGATAATGAGTTCCAAACGAAATACCTTGCCGATAAAACAGGTCTTAGTGGTGGTTGGAGAGGGTTTTCCATTGATCATCAGTTAGTAGATGGGGATGCTTTGGTGTTTCAGTTAACTAAGCCAACTGAATTCAAGGTATATATCATCAGAGCATACAATTTAGAAGATAGAGAAGATACCAATGAGGATTCTGATGTCACCCAATTGGAAAAAAGTGGCAAAAGAAATACCAAATCATCAGGGCAATCCAAGGCAAATAATTCTGAGGATAAAGGAGATAACGGTGAGGATTCAGCAGATGTCTCTCAGTTGGAAAAAAGTGGCAAAAAAACTACTAAATCATCAGGGCGTAAAAGCAGGGCAAATAAATCCAAAGATAAAGCAGATAACGGCGCGGATTTGGATGTCCCCGAGCTGGAAAAAAGTGGCAAAAGAATTACTAGATCATCAAGTAAAGGGAAAAAGTTAGCCAAACAAAAAGGGTTTAGGCATTTTCCGATCAGAAATGGCGTCTGTCATGGCGGTCCGGCGTGCTCGAACCCCCATTCTTATCTCCTCCTTCTTCAAGATACCTTAATCAAAGCCCTAAGCACCTCGGCAATCCGTAACGATTTCTCAAATTTTCCTCCTCCGTCGCAACAACCTTCTTCGGCTGACCCTCGACATCGTCAAGCCCAGTGGGGCTCGCCGAGCCAGGTTCATCCTCCGAGTGGAAATTTTAATAACCAGTCGTTCTCGGAGTTTCAGAATCGCGATTATGTTCAACAGGGAAGCCCTAGTAATCAATTGAAGTATCAGAGTCAGAATCAGAGCCCTCAACCCAATCCTGGATTTTCCCGGCAGGGTCAGAGCTATACTCAACCCGGTAACCCTAATTCGTGGAATCCTCCAAATCAAAGCTACCCGCAGTATCAAAATCCTTCGCAGGCGAACCCTCAAAATTTCAATTATCAGCAACAAAGAGGCCCTAACCAATGGAACAATCAAAAACAGGGATATCCACAATTTGGAAGGCCTGAACAGCGTAACCCACAAGTACAGGATTCTAATCAGTTGAATAATCAGGCTGGGATTCAAAGGCAAGGTGCTCAAAGTCAAGCACCAAATGCCCTTGTATCTCCTATTGATGAACTGCGGCGCCTTTGTGGAGAGGGGAAGATGAAAGAAGCTGTTGAATTATTGAAAGAAGGTGTTAAAGCTGATGCTGATTGTTTCCATTTGTTGTTTGAACTATGTGGGAAATCCAAGTCATTTGACAATGCCAAAGTAGTTCATGATTACTTTTTACAGTCAACTTGTAGAAGTGATCTGCAATTGAATAATAAAGTGCTTGAGATGTATGGGAGATGTGGAAGCATGAGCGATGCACGGAGAGTGTTCGACTATATGCCTGATAGAAATATTGATTCTTGGCATTTTATGATGAAAGGATATGCTGATAATGGATTGGGTGATGAGGGTCTGGAGTTATTTGAGAATATGAAGCAGCTAGGGTTGCAACCCGATTCACAAACTTTCCTATTTGTTATGTCAGCTTGTGCTAGTGCGAATGCTGTGGAAGAAGGATTTCTGTACTTTGAGTCAATGAAAAATGATTATCATATTACCCCAGACATGGATCATTATTTGGGGCTTTTAGGTATTCTTGGAGAACCAGGACACATTAATGAGGCTTTCGAGTATGTTAAGAAACTGCCAATGGAGCCCACAGTTGAGGTATGGGAGACTTTAAAGAACTATGCTAGAATTCATGGAGATGTTGATCTTGAGGACTATGCAGAGGAGCTAATTGTTGATCTGGACCCGACAAAAGCTGTCTCTAATAAGATATCAACGCCACCTCCCAAAAAACGGTCTGCAATTAGCATGCTTGATGGGAAGAACAGGATTAGTGAATTCAGAAATCCAACTCTCTACAAAGATGATGAAAAATTAAAGGCTTTGAAGGCAATGAAAGAACAAGGGTATGTGCCAGATACTAGATATGTTCTTCATGATATCGATCAAGAGGCCAAAGAGCAGGCATTGCTGTATCATAGTGAACGATTGGCAATCGCATATGGATTGATCAGTACTCCAGCACGAACGCCTCTTAGGATCATTAAGAACCTAAGGATCTGCGGTGATTGTCATAATGCCATCAAAATCATGTCTAGAATTGTTGGGAGAGAGTTAATTGTAAGGGACAACAAACGGTTCCATCATTTTAAGGATGCAGCTTGA 2856 42.93 MAPFEFKSNYGALFIGARNSLSRAHHWKIEGNELQFSDGILQQKMVESNLTYEECRRQRLEENKKRMEELNLNKLADALKFSSPKSSPTKQLKRPRQPLDKSSFSVRRSSRFADKPPPNYKEVPVEPLPGIRRTYQRRDLLNRIYASHEERQYAIDRARDLQSSLESRYPSFVKPMLQSHVTGGFWLGLPVQFCKTHLPLEDEMLTLVDEDDNEFQTKYLADKTGLSGGWRGFSIDHQLVDGDALVFQLTKPTEFKVYIIRAYNLEDREDTNEDSDVTQLEKSGKRNTKSSGQSKANNSEDKGDNGEDSADVSQLEKSGKKTTKSSGRKSRANKSKDKADNGADLDVPELEKSGKRITRSSSKGKKLAKQKGFRHFPIRNGVCHGGPACSNPHSYLLLLQDTLIKALSTSAIRNDFSNFPPPSQQPSSADPRHRQAQWGSPSQVHPPSGNFNNQSFSEFQNRDYVQQGSPSNQLKYQSQNQSPQPNPGFSRQGQSYTQPGNPNSWNPPNQSYPQYQNPSQANPQNFNYQQQRGPNQWNNQKQGYPQFGRPEQRNPQVQDSNQLNNQAGIQRQGAQSQAPNALVSPIDELRRLCGEGKMKEAVELLKEGVKADADCFHLLFELCGKSKSFDNAKVVHDYFLQSTCRSDLQLNNKVLEMYGRCGSMSDARRVFDYMPDRNIDSWHFMMKGYADNGLGDEGLELFENMKQLGLQPDSQTFLFVMSACASANAVEEGFLYFESMKNDYHITPDMDHYLGLLGILGEPGHINEAFEYVKKLPMEPTVEVWETLKNYARIHGDVDLEDYAEELIVDLDPTKAVSNKISTPPPKKRSAISMLDGKNRISEFRNPTLYKDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDAA 951
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 6340296 6347207 + CcPI632755_02g006380.1 Cco02g0638 171395

Annotation


Select Seq ID Length Analysis Description Start End IPR GO
Cco02g0638 951 Gene3D Tetratricopeptide repeat domain 587 743 IPR011990 GO:0005515(InterPro)
Cco02g0638 951 SMART B3_2 172 263 IPR003340 GO:0003677(InterPro)
Cco02g0638 951 MobiDBLite consensus disorder prediction 269 372 - -
Cco02g0638 951 MobiDBLite consensus disorder prediction 300 323 - -
Cco02g0638 951 FunFam Pentatricopeptide repeat-containing protein, mitochondrial 587 735 - -
Cco02g0638 951 ProSiteProfiles B3 DNA-binding domain profile. 172 263 IPR003340 GO:0003677(InterPro)
Cco02g0638 951 Pfam PPR repeat family 678 725 IPR002885 -
Cco02g0638 951 SUPERFAMILY DNA-binding pseudobarrel domain 165 262 IPR015300 -
Cco02g0638 951 Gene3D - 147 264 IPR015300 -
Cco02g0638 951 MobiDBLite consensus disorder prediction 78 126 - -
Cco02g0638 951 PANTHER OS07G0578800 PROTEIN-RELATED 590 817 IPR045215 GO:0003723(InterPro)|GO:0003723(PANTHER)|GO:0009451(InterPro)|GO:0009451(PANTHER)|GO:0043231(PANTHER)
Cco02g0638 951 MobiDBLite consensus disorder prediction 415 455 - -
Cco02g0638 951 MobiDBLite consensus disorder prediction 467 559 - -
Cco02g0638 951 Pfam B3 DNA binding domain 172 261 IPR003340 GO:0003677(InterPro)
Cco02g0638 951 NCBIfam pentatricopeptide repeat 681 714 IPR002885 -
Cco02g0638 951 Coils Coil 50 77 - -
Cco02g0638 951 MobiDBLite consensus disorder prediction 330 358 - -
Cco02g0638 951 MobiDBLite consensus disorder prediction 284 299 - -
Cco02g0638 951 CDD B3_DNA 170 261 IPR003340 GO:0003677(InterPro)
Cco02g0638 951 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 678 712 IPR002885 -
Cco02g0638 951 Pfam DYW family of nucleic acid deaminases 866 950 IPR032867 GO:0008270(InterPro)
       

Pathway


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco02g0638 - - - - 0.0
       

Dupl-types


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco02g0638 Cco-Chr2:6340296 Cco04g2286 Cco-Chr4:36352258 2.30E-66 dispersed
Cco08g1757 Cco-Chr8:28760854 Cco02g0638 Cco-Chr2:6340296 2.90E-57 dispersed
Cco03g1088 Cco-Chr3:19236891 Cco02g0638 Cco-Chr2:6340296 2.30E-56 transposed
Cco07g1454 Cco-Chr7:28652218 Cco02g0638 Cco-Chr2:6340296 8.00E-118 transposed
Cco02g0638 Cco-Chr2:6340296 Cco05g1160 Cco-Chr5:10690879 3.80E-33 wgd
       

Syn-Families


Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cco09g0909 . 29 711 B3 DNA Binding Superfamily AT3G24650 50.2 5.0e-114 409.1
Cco01g0865 . 68 277 B3 DNA Binding Superfamily AT3G26790 56.6 3.8e-66 248.8
Cco04g2093 . 169 324 B3 DNA Binding Superfamily AT1G28300 58.6 2.7e-39 159.8
Cco05g2568 . 1 348 B3 DNA Binding Superfamily AT1G25560 59.2 1.6e-108 389.8
Cco03g1000 . 34 311 B3 DNA Binding Superfamily AT1G25560 63.9 2.7e-92 335.9
Cco10g1857 . 41 155 B3 DNA Binding Superfamily AT1G25560 65.2 3.5e-39 159.5
Cco06g0234 . 70 199 B3 DNA Binding Superfamily AT1G25560 57.6 3.2e-37 152.9
Cco01g0128 . 52 160 B3 DNA Binding Superfamily AT1G25560 66.1 4.2e-37 152.5
Cco01g0128 . 51 165 B3 DNA Binding Superfamily AT1G01030 82.8 3.0e-53 206.1
Cco05g2568 . 183 306 B3 DNA Binding Superfamily AT1G01030 62.2 7.9e-38 154.8
Cco04g1106 . 14 696 B3 DNA Binding Superfamily AT4G30080 59.7 5.9e-218 754.2
Cco02g2271 . 4 714 B3 DNA Binding Superfamily AT4G30080 55.2 2.9e-209 725.3
Cco08g0894 . 5 688 B3 DNA Binding Superfamily AT4G30080 54.7 1.8e-198 689.5
Cco03g0008 . 4 736 B3 DNA Binding Superfamily AT2G30470 51.9 5.5e-199 691.4
Cco09g1977 . 56 420 B3 DNA Binding Superfamily AT3G18990 57.8 7.0e-104 374.4
Cco11g0036 . 5 676 B3 DNA Binding Superfamily AT1G59750 68.2 3.7e-249 857.8
Cco09g0944 . 14 676 B3 DNA Binding Superfamily AT1G59750 51.1 1.0e-169 594.0
Cco04g2271 . 92 452 B3 DNA Binding Superfamily AT1G59750 55.6 1.4e-107 387.5
Cco11g1173 . 20 401 B3 DNA Binding Superfamily AT1G59750 51.9 1.4e-107 387.5
Cco03g0798 . 23 396 B3 DNA Binding Superfamily AT1G59750 53.2 3.0e-105 379.8
Cco11g0155 . 23 380 B3 DNA Binding Superfamily AT1G59750 53.4 2.8e-103 373.2
Cco05g2092 . 42 379 B3 DNA Binding Superfamily AT1G59750 52.2 1.6e-98 357.5
Cco02g2271 . 3 714 B3 DNA Binding Superfamily AT2G28350 55.8 9.1e-203 703.7
Cco04g1106 . 13 696 B3 DNA Binding Superfamily AT2G28350 55.3 2.7e-199 692.2
Cco08g0894 . 13 693 B3 DNA Binding Superfamily AT2G28350 51.3 2.7e-175 612.5
Cco09g0944 . 14 691 B3 DNA Binding Superfamily AT2G46530 56.2 4.1e-189 658.3
Cco07g1226 . 18 694 B3 DNA Binding Superfamily AT2G46530 53.1 2.1e-177 619.4
Cco11g0036 . 13 666 B3 DNA Binding Superfamily AT2G46530 50.8 5.0e-163 571.6
Cco04g2271 . 70 437 B3 DNA Binding Superfamily AT2G46530 51.9 1.5e-98 357.5
Cco03g0798 . 1 368 B3 DNA Binding Superfamily AT2G46530 50.4 1.2e-95 347.8
Cco11g1173 . 21 376 B3 DNA Binding Superfamily AT2G46530 50.4 3.3e-90 329.7
Cco04g1106 . 14 696 B3 DNA Binding Superfamily AT4G30080 59.7 5.9e-218 754.2
Cco02g2271 . 4 714 B3 DNA Binding Superfamily AT4G30080 55.2 2.9e-209 725.3
Cco08g0894 . 5 688 B3 DNA Binding Superfamily AT4G30080 54.7 1.8e-198 689.5
Cco09g0944 . 50 678 B3 DNA Binding Superfamily AT3G61830 54.4 3.9e-175 611.7
Cco07g1226 . 54 671 B3 DNA Binding Superfamily AT3G61830 51.9 6.0e-160 561.2
Cco11g0036 . 53 647 B3 DNA Binding Superfamily AT3G61830 51.8 1.7e-154 543.1
Cco04g2271 . 120 433 B3 DNA Binding Superfamily AT3G61830 53.5 1.5e-86 317.4
Cco03g0798 . 51 364 B3 DNA Binding Superfamily AT3G61830 51.7 1.2e-83 307.8
Cco11g0155 . 1 1088 B3 DNA Binding Superfamily AT1G19220 63.4 0.0e+00 1166.0
Cco06g2035 . 41 396 B3 DNA Binding Superfamily AT1G19220 52.5 1.9e-104 377.9
Cco11g0036 . 26 387 B3 DNA Binding Superfamily AT1G19220 51.0 9.8e-98 355.5
Cco04g2119 . 46 379 B3 DNA Binding Superfamily AT1G19220 50.1 2.6e-90 330.9
Cco09g0944 . 20 224 B3 DNA Binding Superfamily AT1G43950 56.1 3.7e-60 228.4
Cco07g1226 . 24 228 B3 DNA Binding Superfamily AT1G43950 56.8 2.4e-59 225.7
Cco11g0036 . 19 227 B3 DNA Binding Superfamily AT1G43950 51.2 6.6e-57 217.6
Cco06g2035 . 41 246 B3 DNA Binding Superfamily AT1G43950 51.9 1.6e-55 213.0
Cco04g2119 . 149 434 B3 DNA Binding Superfamily AT2G33860 67.2 8.0e-110 394.4
Cco02g2251 . 199 482 B3 DNA Binding Superfamily AT2G33860 57.0 3.1e-90 329.3
Cco06g2035 . 147 436 B3 DNA Binding Superfamily AT2G33860 51.0 2.0e-76 283.5
Cco04g2271 . 196 427 B3 DNA Binding Superfamily AT2G33860 56.5 2.1e-70 263.5
Cco03g0798 . 127 358 B3 DNA Binding Superfamily AT2G33860 56.5 2.8e-70 263.1
Cco11g0155 . 126 356 B3 DNA Binding Superfamily AT2G33860 54.5 6.8e-69 258.5
Cco11g1173 . 134 365 B3 DNA Binding Superfamily AT2G33860 54.7 1.2e-68 257.7
Cco07g1226 . 129 356 B3 DNA Binding Superfamily AT2G33860 51.9 3.4e-68 256.1
Cco05g2092 . 149 407 B3 DNA Binding Superfamily AT2G33860 53.5 5.8e-68 255.4
Cco09g0944 . 125 352 B3 DNA Binding Superfamily AT2G33860 52.4 2.4e-66 250.0
Cco02g2251 . 78 833 B3 DNA Binding Superfamily AT5G60450 60.4 5.1e-250 860.9
Cco04g2119 . 41 503 B3 DNA Binding Superfamily AT5G60450 51.7 1.4e-122 437.6
Cco03g0798 . 7 377 B3 DNA Binding Superfamily AT5G60450 50.4 1.6e-102 370.9
Cco11g0155 . 14 374 B3 DNA Binding Superfamily AT5G60450 50.1 8.2e-99 358.6
Cco05g2092 . 8 939 B3 DNA Binding Superfamily AT1G19850 60.6 3.3e-293 1004.6
Cco11g0036 . 16 357 B3 DNA Binding Superfamily AT1G19850 52.5 1.2e-98 358.2
Cco09g0944 . 10 351 B3 DNA Binding Superfamily AT1G19850 50.3 2.2e-95 347.4
Cco07g1226 . 24 355 B3 DNA Binding Superfamily AT1G19850 51.3 1.2e-93 341.7
Cco04g2271 . 70 972 B3 DNA Binding Superfamily AT1G30330 69.0 0.0e+00 1200.7
Cco03g0798 . 1 898 B3 DNA Binding Superfamily AT1G30330 70.2 0.0e+00 1166.0
Cco01g0869 . 29 992 B3 DNA Binding Superfamily AT1G30330 52.4 4.9e-247 851.3
Cco11g0036 . 23 383 B3 DNA Binding Superfamily AT1G30330 54.0 3.0e-103 373.6
Cco06g2035 . 41 395 B3 DNA Binding Superfamily AT1G30330 52.8 1.3e-101 368.2
Cco07g1226 . 24 379 B3 DNA Binding Superfamily AT1G30330 52.2 1.8e-100 364.4
Cco09g0944 . 7 352 B3 DNA Binding Superfamily AT1G30330 53.8 3.1e-100 363.6
Cco11g0155 . 1 1085 B3 DNA Binding Superfamily AT5G20730 56.8 0.0e+00 1090.1
Cco03g0798 . 4 471 B3 DNA Binding Superfamily AT5G20730 59.2 1.1e-150 531.6
Cco04g2271 . 73 537 B3 DNA Binding Superfamily AT5G20730 59.1 9.0e-150 528.5
Cco06g2035 . 41 393 B3 DNA Binding Superfamily AT5G20730 52.0 3.1e-102 370.5
Cco11g0036 . 6 360 B3 DNA Binding Superfamily AT5G20730 51.5 1.5e-96 351.7
Cco01g0869 . 126 961 B3 DNA Binding Superfamily AT5G37020 55.9 1.8e-236 815.8
Cco04g2271 . 166 934 B3 DNA Binding Superfamily AT5G37020 53.7 1.6e-200 696.4
Cco03g0798 . 97 861 B3 DNA Binding Superfamily AT5G37020 52.9 9.8e-187 650.6
Cco11g0155 . 96 420 B3 DNA Binding Superfamily AT5G37020 62.4 3.0e-111 399.8
Cco11g1173 . 104 461 B3 DNA Binding Superfamily AT5G37020 59.1 6.3e-109 392.1
Cco11g0036 . 101 376 B3 DNA Binding Superfamily AT5G37020 53.4 1.1e-76 285.0
Cco07g1226 . 1 697 B3 DNA Binding Superfamily AT4G23980 56.1 1.1e-202 703.4
Cco09g0944 . 17 676 B3 DNA Binding Superfamily AT4G23980 57.4 1.2e-196 683.3
Cco01g0179 . 94 842 B3 DNA Binding Superfamily AT4G23980 50.7 4.8e-185 644.8
Cco11g0036 . 16 647 B3 DNA Binding Superfamily AT4G23980 53.1 4.8e-169 591.7
Cco11g1173 . 17 385 B3 DNA Binding Superfamily AT4G23980 50.3 2.0e-98 357.1
Cco05g2092 . 46 379 B3 DNA Binding Superfamily AT4G23980 52.4 4.9e-97 352.4
Cco06g2035 . 1 821 B3 DNA Binding Superfamily AT5G62000 60.8 4.6e-284 974.2
Cco11g1173 . 8 404 B3 DNA Binding Superfamily AT5G62000 51.2 2.0e-109 394.0
Cco11g0155 . 23 381 B3 DNA Binding Superfamily AT5G62000 53.3 3.5e-106 383.3
Cco09g0909 . 29 711 B3 DNA Binding Superfamily AT3G24650 50.2 5.0e-114 409.1
Cco04g2093 . 169 324 B3 DNA Binding Superfamily AT1G28300 58.6 2.7e-39 159.8
Cco01g0865 . 68 277 B3 DNA Binding Superfamily AT3G26790 56.6 3.8e-66 248.8
Cco03g0008 . 4 736 B3 DNA Binding Superfamily AT2G30470 51.9 5.5e-199 691.4
Cco11g0155 . 1 1088 B3 DNA Binding Superfamily AT1G19220 63.4 0.0e+00 1166.0
Cco06g2035 . 41 396 B3 DNA Binding Superfamily AT1G19220 52.5 1.9e-104 377.9
Cco11g0036 . 26 387 B3 DNA Binding Superfamily AT1G19220 51.0 9.8e-98 355.5
Cco04g2119 . 46 379 B3 DNA Binding Superfamily AT1G19220 50.1 2.6e-90 330.9
Cco05g2092 . 8 939 B3 DNA Binding Superfamily AT1G19850 60.6 3.3e-293 1004.6
Cco11g0036 . 16 357 B3 DNA Binding Superfamily AT1G19850 52.5 1.2e-98 358.2
Cco09g0944 . 10 351 B3 DNA Binding Superfamily AT1G19850 50.3 2.2e-95 347.4
Cco07g1226 . 24 355 B3 DNA Binding Superfamily AT1G19850 51.3 1.2e-93 341.7
Cco04g2271 . 70 972 B3 DNA Binding Superfamily AT1G30330 69.0 0.0e+00 1200.7
Cco03g0798 . 1 898 B3 DNA Binding Superfamily AT1G30330 70.2 0.0e+00 1166.0
Cco01g0869 . 29 992 B3 DNA Binding Superfamily AT1G30330 52.4 4.9e-247 851.3
Cco11g0036 . 23 383 B3 DNA Binding Superfamily AT1G30330 54.0 3.0e-103 373.6
Cco06g2035 . 41 395 B3 DNA Binding Superfamily AT1G30330 52.8 1.3e-101 368.2
Cco07g1226 . 24 379 B3 DNA Binding Superfamily AT1G30330 52.2 1.8e-100 364.4
Cco09g0944 . 7 352 B3 DNA Binding Superfamily AT1G30330 53.8 3.1e-100 363.6
Cco11g0155 . 1 1085 B3 DNA Binding Superfamily AT5G20730 56.8 0.0e+00 1090.1
Cco03g0798 . 4 471 B3 DNA Binding Superfamily AT5G20730 59.2 1.1e-150 531.6
Cco04g2271 . 73 537 B3 DNA Binding Superfamily AT5G20730 59.1 9.0e-150 528.5
Cco06g2035 . 41 393 B3 DNA Binding Superfamily AT5G20730 52.0 3.1e-102 370.5
Cco11g0036 . 6 360 B3 DNA Binding Superfamily AT5G20730 51.5 1.5e-96 351.7
Cco01g0869 . 126 961 B3 DNA Binding Superfamily AT5G37020 55.9 1.8e-236 815.8
Cco04g2271 . 166 934 B3 DNA Binding Superfamily AT5G37020 53.7 1.6e-200 696.4
Cco03g0798 . 97 861 B3 DNA Binding Superfamily AT5G37020 52.9 9.8e-187 650.6
Cco11g0155 . 96 420 B3 DNA Binding Superfamily AT5G37020 62.4 3.0e-111 399.8
Cco11g1173 . 104 461 B3 DNA Binding Superfamily AT5G37020 59.1 6.3e-109 392.1
Cco11g0036 . 101 376 B3 DNA Binding Superfamily AT5G37020 53.4 1.1e-76 285.0
Cco04g2119 . 149 434 B3 DNA Binding Superfamily AT2G33860 67.2 8.0e-110 394.4
Cco02g2251 . 199 482 B3 DNA Binding Superfamily AT2G33860 57.0 3.1e-90 329.3
Cco06g2035 . 147 436 B3 DNA Binding Superfamily AT2G33860 51.0 2.0e-76 283.5
Cco04g2271 . 196 427 B3 DNA Binding Superfamily AT2G33860 56.5 2.1e-70 263.5
Cco03g0798 . 127 358 B3 DNA Binding Superfamily AT2G33860 56.5 2.8e-70 263.1
Cco11g0155 . 126 356 B3 DNA Binding Superfamily AT2G33860 54.5 6.8e-69 258.5
Cco11g1173 . 134 365 B3 DNA Binding Superfamily AT2G33860 54.7 1.2e-68 257.7
Cco07g1226 . 129 356 B3 DNA Binding Superfamily AT2G33860 51.9 3.4e-68 256.1
Cco05g2092 . 149 407 B3 DNA Binding Superfamily AT2G33860 53.5 5.8e-68 255.4
Cco09g0944 . 125 352 B3 DNA Binding Superfamily AT2G33860 52.4 2.4e-66 250.0
Cco02g2251 . 78 833 B3 DNA Binding Superfamily AT5G60450 60.4 5.1e-250 860.9
Cco04g2119 . 41 503 B3 DNA Binding Superfamily AT5G60450 51.7 1.4e-122 437.6
Cco03g0798 . 7 377 B3 DNA Binding Superfamily AT5G60450 50.4 1.6e-102 370.9
Cco11g0155 . 14 374 B3 DNA Binding Superfamily AT5G60450 50.1 8.2e-99 358.6
Cco11g0036 . 5 676 B3 DNA Binding Superfamily AT1G59750 68.2 3.7e-249 857.8
Cco09g0944 . 14 676 B3 DNA Binding Superfamily AT1G59750 51.1 1.0e-169 594.0
Cco04g2271 . 92 452 B3 DNA Binding Superfamily AT1G59750 55.6 1.4e-107 387.5
Cco11g1173 . 20 401 B3 DNA Binding Superfamily AT1G59750 51.9 1.4e-107 387.5
Cco03g0798 . 23 396 B3 DNA Binding Superfamily AT1G59750 53.2 3.0e-105 379.8
Cco11g0155 . 23 380 B3 DNA Binding Superfamily AT1G59750 53.4 2.8e-103 373.2
Cco05g2092 . 42 379 B3 DNA Binding Superfamily AT1G59750 52.2 1.6e-98 357.5
Cco06g2035 . 1 821 B3 DNA Binding Superfamily AT5G62000 60.8 4.6e-284 974.2
Cco11g1173 . 8 404 B3 DNA Binding Superfamily AT5G62000 51.2 2.0e-109 394.0
Cco11g0155 . 23 381 B3 DNA Binding Superfamily AT5G62000 53.3 3.5e-106 383.3
Cco09g0944 . 14 691 B3 DNA Binding Superfamily AT2G46530 56.2 4.1e-189 658.3
Cco07g1226 . 18 694 B3 DNA Binding Superfamily AT2G46530 53.1 2.1e-177 619.4
Cco11g0036 . 13 666 B3 DNA Binding Superfamily AT2G46530 50.8 5.0e-163 571.6
Cco04g2271 . 70 437 B3 DNA Binding Superfamily AT2G46530 51.9 1.5e-98 357.5
Cco03g0798 . 1 368 B3 DNA Binding Superfamily AT2G46530 50.4 1.2e-95 347.8
Cco11g1173 . 21 376 B3 DNA Binding Superfamily AT2G46530 50.4 3.3e-90 329.7
Cco09g0944 . 50 678 B3 DNA Binding Superfamily AT3G61830 54.4 3.9e-175 611.7
Cco07g1226 . 54 671 B3 DNA Binding Superfamily AT3G61830 51.9 6.0e-160 561.2
Cco11g0036 . 53 647 B3 DNA Binding Superfamily AT3G61830 51.8 1.7e-154 543.1
Cco04g2271 . 120 433 B3 DNA Binding Superfamily AT3G61830 53.5 1.5e-86 317.4
Cco03g0798 . 51 364 B3 DNA Binding Superfamily AT3G61830 51.7 1.2e-83 307.8
Cco07g1226 . 1 697 B3 DNA Binding Superfamily AT4G23980 56.1 1.1e-202 703.4
Cco09g0944 . 17 676 B3 DNA Binding Superfamily AT4G23980 57.4 1.2e-196 683.3
Cco01g0179 . 94 842 B3 DNA Binding Superfamily AT4G23980 50.7 4.8e-185 644.8
Cco11g0036 . 16 647 B3 DNA Binding Superfamily AT4G23980 53.1 4.8e-169 591.7
Cco11g1173 . 17 385 B3 DNA Binding Superfamily AT4G23980 50.3 2.0e-98 357.1
Cco05g2092 . 46 379 B3 DNA Binding Superfamily AT4G23980 52.4 4.9e-97 352.4
Cco09g0944 . 20 224 B3 DNA Binding Superfamily AT1G43950 56.1 3.7e-60 228.4
Cco07g1226 . 24 228 B3 DNA Binding Superfamily AT1G43950 56.8 2.4e-59 225.7
Cco11g0036 . 19 227 B3 DNA Binding Superfamily AT1G43950 51.2 6.6e-57 217.6
Cco06g2035 . 41 246 B3 DNA Binding Superfamily AT1G43950 51.9 1.6e-55 213.0
Cco02g2271 . 3 714 B3 DNA Binding Superfamily AT2G28350 55.8 9.1e-203 703.7
Cco04g1106 . 13 696 B3 DNA Binding Superfamily AT2G28350 55.3 2.7e-199 692.2
Cco08g0894 . 13 693 B3 DNA Binding Superfamily AT2G28350 51.3 2.7e-175 612.5
Cco04g1106 . 14 696 B3 DNA Binding Superfamily AT4G30080 59.7 5.9e-218 754.2
Cco02g2271 . 4 714 B3 DNA Binding Superfamily AT4G30080 55.2 2.9e-209 725.3
Cco08g0894 . 5 688 B3 DNA Binding Superfamily AT4G30080 54.7 1.8e-198 689.5
Cco01g0128 . 51 165 B3 DNA Binding Superfamily AT1G01030 82.8 3.0e-53 206.1
Cco05g2568 . 183 306 B3 DNA Binding Superfamily AT1G01030 62.2 7.9e-38 154.8
Cco05g2568 . 1 348 B3 DNA Binding Superfamily AT1G25560 59.2 1.6e-108 389.8
Cco03g1000 . 34 311 B3 DNA Binding Superfamily AT1G25560 63.9 2.7e-92 335.9
Cco10g1857 . 41 155 B3 DNA Binding Superfamily AT1G25560 65.2 3.5e-39 159.5
Cco06g0234 . 70 199 B3 DNA Binding Superfamily AT1G25560 57.6 3.2e-37 152.9
Cco01g0128 . 52 160 B3 DNA Binding Superfamily AT1G25560 66.1 4.2e-37 152.5
Cco02g0638 . 45 276 B3 DNA Binding Superfamily AT3G19184 62.2 1.6e-68 256.5
Cco08g1758 . 6 227 B3 DNA Binding Superfamily AT3G19184 54.6 3.7e-52 202.2
Cco08g1757 . 405 628 B3 DNA Binding Superfamily AT3G19184 51.3 7.9e-47 184.5
Cco08g1758 . 51 228 B3 DNA Binding Superfamily AT5G42700 58.9 6.3e-53 204.1
Cco08g1757 . 452 630 B3 DNA Binding Superfamily AT5G42700 52.5 4.8e-45 177.9
Cco02g0638 . 95 261 B3 DNA Binding Superfamily AT5G42700 56.8 6.3e-45 177.6
Cco09g1977 . 56 420 B3 DNA Binding Superfamily AT3G18990 57.8 7.0e-104 374.4
       

Syn-Orthogroups


Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002548 0 2 0 0 2 2 3 2 2 2 2 2 3 2 3 3 2 4 2 2 1 3 2 3 2 2 2 2 1 1 59
       

Regulatory proteins


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58729 PF14432 DYW_deaminase 6.70E-33 CL0109 Cco TF