Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cco02g0647 ATGGAAGCTCTCTCTGTTCCTCTTTACATAATAATATTCCTTTTTCTTTTTGCTTTCTTTTCCACTTCATTTCTTAAAAGAACTGGAAAGCCTAAATCCCAAAAAGCTCTTAGACTTCCTCCTGGTTCCATGGGATTGCCTTGGATTGGTGAAACTTTGCAACTTTATTCTCAAGATCCTAATATCTTTTTCTCACAAAAACAGAGAAGATATGGAGAAATTTTTAAGACCAACATTTTGGGATATCCTTGTGTGATGTTGGCAAGCGCCGCCGCAGCACGGTTCGTTCTGGTGACAAACGCCCATTTATTCCGGCCGACTTACCCGAAAAGCAAAGAGACCATGATCGGACCGGCGGCGCTTTTCTTCCACCAAGGAAATTACCATTCTAACCTCAGGAAACTTGTTCAAAATTCTTTATCTCTTGAACGACTCAGAATTCTTATTCCTCATATTGAAGCCGCCGCCATTTCCGCCACCGATTCCTGGGCCGCCGCCGGCCACGTCATCAACACCTTCCTCGAAATGAAAAAGTTTTCTTTTGAGGTGGGAATTGTAGCAGTGTTTGGTAAGCTAGAAAATGAGTACAAAGAGAAGCTAAAAGAAAAGTATTGCATATTAGACAAAGGCTACAATTGTTTTCCAACCAAATTACCAGGAACAGCATATTCAAAAGCATTATCAGCAAGGAAGAAGCTGAGAGAGATTCTGGGAGAGATAATTATGGAGAGAAGAGAAAAAAGAGTAACAGAGAAAGATTTAGTGGGTCATCTTTTAAACTTCAGAGATGAAAATGGAGAATGTTTAAGTGAAGATCAAATCGCCGACAACATCATCGGAGTGCTCTTCGCCGCCCAAGACACCACCGCCACTGTCCTCACTTGGATTCTTAAATATCTTCATGACAACTTGAAGCTCTTTGAGGCCGTCAAGGCAGAGCAGATGGAAATTTATAGAAGAAATGGAGAGGGGAAGATGCCTCTGTCTTGGGCTCAAATTAAAGACATGCCCTTTGCTCATAGGGTGGTATTAGAGAGCTTGAGAATGGCTAGCATCATATCTTTCACTTTTAGGGAGGCAGTTGTTGATGTGGAATATAAAGGGTATCTTATCCCAAAGGGTTGGAAGGTGATGCCCTTATTTAGGAATATTCATCACAACCATGAGTACTTCCCTGATCCTCATATCTTTGATCCCTCTAGATTTGAGGTGGCTCCAAGACCCAATACATTCATGCCATTTGGCAATGGAGTACATTCTTGCCCTGGCAATGAACTTGCCAAGCTGGAAATCCTCATCTTGCTTCATCACCTCATTACCAAATTTAGGTGGGAAGTTGTGGGATCACAAAGTGGCGTTGAATATGGGCCATTCCCAATGCCTGTCCACGGGCTACCGGCCAGATTTTTCAAACAAACAACAACCAACCAATAG 1434 42.33 MEALSVPLYIIIFLFLFAFFSTSFLKRTGKPKSQKALRLPPGSMGLPWIGETLQLYSQDPNIFFSQKQRRYGEIFKTNILGYPCVMLASAAAARFVLVTNAHLFRPTYPKSKETMIGPAALFFHQGNYHSNLRKLVQNSLSLERLRILIPHIEAAAISATDSWAAAGHVINTFLEMKKFSFEVGIVAVFGKLENEYKEKLKEKYCILDKGYNCFPTKLPGTAYSKALSARKKLREILGEIIMERREKRVTEKDLVGHLLNFRDENGECLSEDQIADNIIGVLFAAQDTTATVLTWILKYLHDNLKLFEAVKAEQMEIYRRNGEGKMPLSWAQIKDMPFAHRVVLESLRMASIISFTFREAVVDVEYKGYLIPKGWKVMPLFRNIHHNHEYFPDPHIFDPSRFEVAPRPNTFMPFGNGVHSCPGNELAKLEILILLHHLITKFRWEVVGSQSGVEYGPFPMPVHGLPARFFKQTTTNQ 477
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 6402125 6406315 - CcPI632755_02g006470.1 Cco02g0647 171404
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cco02g0647 477 PRINTS P450 superfamily signature 421 432 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco02g0647 477 PRINTS P450 superfamily signature 284 301 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco02g0647 477 PRINTS P450 superfamily signature 412 421 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco02g0647 477 PRINTS P450 superfamily signature 341 352 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco02g0647 477 FunFam Abscisic acid 8 29 471 - -
Cco02g0647 477 PRINTS E-class P450 group I signature 273 290 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco02g0647 477 PRINTS E-class P450 group I signature 421 444 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco02g0647 477 PRINTS E-class P450 group I signature 380 404 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco02g0647 477 PRINTS E-class P450 group I signature 340 358 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco02g0647 477 PRINTS E-class P450 group I signature 411 421 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco02g0647 477 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco02g0647 477 PANTHER CYTOCHROME P450 26 38 450 - GO:0004497(PANTHER)|GO:0010295(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)
Cco02g0647 477 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 414 423 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cco02g0647 477 SUPERFAMILY Cytochrome P450 34 470 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco02g0647 477 Pfam Cytochrome P450 40 447 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco02g0647 477 Gene3D Cytochrome P450 28 471 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco02g0647 477 CDD CYP90-like 68 468 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco02g0647 Cco-Chr2:6402125 Cco08g1779 Cco-Chr8:28899018 3.60E-177 dispersed
Cco02g0647 Cco-Chr2:6402125 Cco05g2251 Cco-Chr5:31238407 4.40E-183 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco02g0647 K09843 - csv:101219389 871.307