Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cco02g0648 ATGGCTTCCACGACAAACGGACAAGAAGACCAGAACCAAGCCGGAAGGCACCAAGAAGTCGGCCACAAGAGCCTGTTGCAAAGCGATGCTCTGTATCAGTACATTCTGGAGACGAGCGTTTATCCAAGGGAGCCTGAATCGATGAAGGAATTAAGAGAATTGACAGCGAAACATCCATGGAATATAATGACGACATCGGCGGATGAAGGACAGTTCTTAAACATGTTATTGAAGCTAATTAATGCGAAGAAAACGATGGAGATTGGAGTTTATACTGGCTACTCGCTTCTGGCTACAGCCCTAGCTCTTCCCGAAGATGGAACGATTCTGGCTATGGATATTAACAGAGAAAATTACGAGCTGGGTTTGCCGGTGATTGAGAAAGCCGGCGTTGCTCACAAGATCGAGTTCAAGGAAGGCCCTGCTCTCCCTGTTCTTGACGAGATGGTGGCTGATGAGAAGAATCATGGAAGCTTTGACTTCATATTTGTGGATGCTGATAAAGACAACTACATAAATTACCATAAAAGATTGATTGATTTGGTCAAAGTTGGGGGAGTGATCGGGTACGACAACACTCTATGGAACGGGTCCGTGGTTGCCCCACCTAACGCACCCATGCGCAAGTATGTTAGGTATTATCGGGACTTTGTGTTGGAGCTCAACAAAGCTCTTGCAATTGACCCTAGGATCGAGATTTGTATGCTTCCCGTTGGTGATGGAATCACTCTCTGTCGTCGGATCAACTAA 750 46.13 MASTTNGQEDQNQAGRHQEVGHKSLLQSDALYQYILETSVYPREPESMKELRELTAKHPWNIMTTSADEGQFLNMLLKLINAKKTMEIGVYTGYSLLATALALPEDGTILAMDINRENYELGLPVIEKAGVAHKIEFKEGPALPVLDEMVADEKNHGSFDFIFVDADKDNYINYHKRLIDLVKVGGVIGYDNTLWNGSVVAPPNAPMRKYVRYYRDFVLELNKALAIDPRIEICMLPVGDGITLCRRIN 249
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 6446750 6448576 - CcPI632755_02g006480.1 Cco02g0648 171405
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cco02g0648 249 CDD AdoMet_MTases 87 188 - -
Cco02g0648 249 Pfam O-methyltransferase 37 248 IPR002935 GO:0008171(InterPro)
Cco02g0648 249 Gene3D Vaccinia Virus protein VP39 14 249 IPR029063 -
Cco02g0648 249 MobiDBLite consensus disorder prediction 1 20 - -
Cco02g0648 249 FunFam Caffeoyl-CoA O-methyltransferase 1 17 249 - -
Cco02g0648 249 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 28 247 IPR029063 -
Cco02g0648 249 PANTHER O-METHYLTRANSFERASE-RELATED 21 248 IPR050362 GO:0008757(PANTHER)
Cco02g0648 249 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 24 248 IPR002935 GO:0008171(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco02g0648 Cco-Chr2:6446750 Cco11g1421 Cco-Chr11:26973735 4.70E-64 dispersed
Cco05g1178 Cco-Chr5:10930552 Cco02g0648 Cco-Chr2:6446750 3.30E-31 transposed
Cco02g0648 Cco-Chr2:6446750 Cco04g1450 Cco-Chr4:29922485 8.50E-29 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco02g0648 K00588 - csv:101205648 495.352