Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco02g0698 | ATGGGAAGCGTTGAAGGACAAAGAACAACAACAGGATTTGCAGCAAGAGATCCATCTGGGTTTCTCTCTCCTTACACTTACGAACTCAGAGAAACAGGGGCAGAGGATGTTTACATAAGAGTTATATGTTGTGGGCTTTGTCATACTGATATTCATCAGATCAAAAACGAGCTTGGAATGTCCAATTATCCCATGGTTCCAGGGCATGAAGTTGTTGGTGAAGTGGTGGAAATTGGGAAGAATGTGAAGAGATTTAAAGTGAAGGATATTGTGGGAGTTGGATGCATAGTTGGATCTTGCAAAATTTGCGAGCGATGTGGAACTGACAGAGAACAATATTGCAATAACAAAATTTGGACTAATAACGATGTCTATACCGACGGTAGGCCCACTCAAGGCGGCTTCGCCGCCGCCATGGTCGTCGATCAAAAGTTTGTGGTGAAGGTACCAGATGGAATGGCACCGGAGCAGGCGGCGGCGCTACTATGCGCGGGCGTGACAGTGTACAGTCCATTGAACCATTTTGGGATGAAGAAAAGTGGGCTAAGAGGAGGGATCTTAGGGCTTGGTGGTGTTGGGCACATGGGGGTGAAACTAGCAAAGGCATTGGGCCATCATGTCACAGTTATAAGCTCCTCCAACAAGAAGAGGGCAGAAGCTCTGGACCATCTCGGGGCCGACGACTACCTCGTTAGCTCCGACGAGGATCGGATGCAACAGGCCGTCGACTCCCTCGACTACATCATCGACACCGTGCCGGTCTTTCACCCTCTCGAGCCTTATCTTTCGCTGCTCAAGCTCGATGGCAAGTTAATCATGTTGGGTGTTATTAATAATCCTCTCCAATTCGTCTCTCCCATGGTTATTCTTGGGAGGAAGACAATCACAGGGAGTTTCATAGGGAGCATGAAGGAGACACAGGAGATTCTGGATTTTTTCAAAGAGAAGGAATTGAGTTCAATGGTGGAAGTGGTGAAGATGGATTACATAAACAAAGCCATTGAAAGGTTGGAGAAGAATGATGTTAGATACAGGTTTGTTGTGGATGTTGAAGGAAGCAAATTTTAA | 1068 | 46.54 | MGSVEGQRTTTGFAARDPSGFLSPYTYELRETGAEDVYIRVICCGLCHTDIHQIKNELGMSNYPMVPGHEVVGEVVEIGKNVKRFKVKDIVGVGCIVGSCKICERCGTDREQYCNNKIWTNNDVYTDGRPTQGGFAAAMVVDQKFVVKVPDGMAPEQAAALLCAGVTVYSPLNHFGMKKSGLRGGILGLGGVGHMGVKLAKALGHHVTVISSSNKKRAEALDHLGADDYLVSSDEDRMQQAVDSLDYIIDTVPVFHPLEPYLSLLKLDGKLIMLGVINNPLQFVSPMVILGRKTITGSFIGSMKETQEILDFFKEKELSSMVEVVKMDYINKAIERLEKNDVRYRFVVDVEGSKF | 355 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 7064879 | 7067533 | - | CcPI632755_02g006980.1 | Cco02g0698 | 171455 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco02g0698 | 355 | Gene3D | - | 13 | 350 | - | - | |
Cco02g0698 | 355 | SMART | PKS_ER_names_mod | 20 | 348 | IPR020843 | GO:0016491(InterPro) | |
Cco02g0698 | 355 | FunFam | Cinnamyl alcohol dehydrogenase | 164 | 320 | - | - | |
Cco02g0698 | 355 | FunFam | Putative cinnamyl alcohol dehydrogenase 6 | 321 | 350 | - | - | |
Cco02g0698 | 355 | Pfam | Zinc-binding dehydrogenase | 191 | 314 | IPR013149 | - | |
Cco02g0698 | 355 | SUPERFAMILY | GroES-like | 16 | 181 | IPR011032 | - | |
Cco02g0698 | 355 | ProSitePatterns | Zinc-containing alcohol dehydrogenases signature. | 68 | 82 | IPR002328 | GO:0008270(InterPro)|GO:0016491(InterPro) | |
Cco02g0698 | 355 | Gene3D | - | 164 | 320 | - | - | |
Cco02g0698 | 355 | Pfam | Alcohol dehydrogenase GroES-like domain | 34 | 151 | IPR013154 | - | |
Cco02g0698 | 355 | PANTHER | ALDEHYDE REDUCTASE | 9 | 351 | IPR047109 | GO:0009809(PANTHER)|GO:0016616(InterPro)|GO:0016616(PANTHER)|GO:0045551(PANTHER) | |
Cco02g0698 | 355 | CDD | CAD1 | 11 | 349 | IPR047109 | GO:0016616(InterPro) | |
Cco02g0698 | 355 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 155 | 318 | IPR036291 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco02g0698 | Cco-Chr2:7064879 | Cco04g1584 | Cco-Chr4:31215056 | 4.30E-103 | dispersed | |
Cco08g1119 | Cco-Chr8:22922281 | Cco02g0698 | Cco-Chr2:7064879 | 1.40E-12 | transposed | |
Cco02g0698 | Cco-Chr2:7064879 | Cco05g1196 | Cco-Chr5:11119277 | 4.40E-172 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco02g0698 | K00083 | - | csv:101214622 | 634.795 |