Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco02g0698 ATGGGAAGCGTTGAAGGACAAAGAACAACAACAGGATTTGCAGCAAGAGATCCATCTGGGTTTCTCTCTCCTTACACTTACGAACTCAGAGAAACAGGGGCAGAGGATGTTTACATAAGAGTTATATGTTGTGGGCTTTGTCATACTGATATTCATCAGATCAAAAACGAGCTTGGAATGTCCAATTATCCCATGGTTCCAGGGCATGAAGTTGTTGGTGAAGTGGTGGAAATTGGGAAGAATGTGAAGAGATTTAAAGTGAAGGATATTGTGGGAGTTGGATGCATAGTTGGATCTTGCAAAATTTGCGAGCGATGTGGAACTGACAGAGAACAATATTGCAATAACAAAATTTGGACTAATAACGATGTCTATACCGACGGTAGGCCCACTCAAGGCGGCTTCGCCGCCGCCATGGTCGTCGATCAAAAGTTTGTGGTGAAGGTACCAGATGGAATGGCACCGGAGCAGGCGGCGGCGCTACTATGCGCGGGCGTGACAGTGTACAGTCCATTGAACCATTTTGGGATGAAGAAAAGTGGGCTAAGAGGAGGGATCTTAGGGCTTGGTGGTGTTGGGCACATGGGGGTGAAACTAGCAAAGGCATTGGGCCATCATGTCACAGTTATAAGCTCCTCCAACAAGAAGAGGGCAGAAGCTCTGGACCATCTCGGGGCCGACGACTACCTCGTTAGCTCCGACGAGGATCGGATGCAACAGGCCGTCGACTCCCTCGACTACATCATCGACACCGTGCCGGTCTTTCACCCTCTCGAGCCTTATCTTTCGCTGCTCAAGCTCGATGGCAAGTTAATCATGTTGGGTGTTATTAATAATCCTCTCCAATTCGTCTCTCCCATGGTTATTCTTGGGAGGAAGACAATCACAGGGAGTTTCATAGGGAGCATGAAGGAGACACAGGAGATTCTGGATTTTTTCAAAGAGAAGGAATTGAGTTCAATGGTGGAAGTGGTGAAGATGGATTACATAAACAAAGCCATTGAAAGGTTGGAGAAGAATGATGTTAGATACAGGTTTGTTGTGGATGTTGAAGGAAGCAAATTTTAA 1068 46.54 MGSVEGQRTTTGFAARDPSGFLSPYTYELRETGAEDVYIRVICCGLCHTDIHQIKNELGMSNYPMVPGHEVVGEVVEIGKNVKRFKVKDIVGVGCIVGSCKICERCGTDREQYCNNKIWTNNDVYTDGRPTQGGFAAAMVVDQKFVVKVPDGMAPEQAAALLCAGVTVYSPLNHFGMKKSGLRGGILGLGGVGHMGVKLAKALGHHVTVISSSNKKRAEALDHLGADDYLVSSDEDRMQQAVDSLDYIIDTVPVFHPLEPYLSLLKLDGKLIMLGVINNPLQFVSPMVILGRKTITGSFIGSMKETQEILDFFKEKELSSMVEVVKMDYINKAIERLEKNDVRYRFVVDVEGSKF 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7064879 7067533 - CcPI632755_02g006980.1 Cco02g0698 171455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco02g0698 355 Gene3D - 13 350 - -
Cco02g0698 355 SMART PKS_ER_names_mod 20 348 IPR020843 GO:0016491(InterPro)
Cco02g0698 355 FunFam Cinnamyl alcohol dehydrogenase 164 320 - -
Cco02g0698 355 FunFam Putative cinnamyl alcohol dehydrogenase 6 321 350 - -
Cco02g0698 355 Pfam Zinc-binding dehydrogenase 191 314 IPR013149 -
Cco02g0698 355 SUPERFAMILY GroES-like 16 181 IPR011032 -
Cco02g0698 355 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270(InterPro)|GO:0016491(InterPro)
Cco02g0698 355 Gene3D - 164 320 - -
Cco02g0698 355 Pfam Alcohol dehydrogenase GroES-like domain 34 151 IPR013154 -
Cco02g0698 355 PANTHER ALDEHYDE REDUCTASE 9 351 IPR047109 GO:0009809(PANTHER)|GO:0016616(InterPro)|GO:0016616(PANTHER)|GO:0045551(PANTHER)
Cco02g0698 355 CDD CAD1 11 349 IPR047109 GO:0016616(InterPro)
Cco02g0698 355 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 318 IPR036291 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco02g0698 Cco-Chr2:7064879 Cco04g1584 Cco-Chr4:31215056 4.30E-103 dispersed
Cco08g1119 Cco-Chr8:22922281 Cco02g0698 Cco-Chr2:7064879 1.40E-12 transposed
Cco02g0698 Cco-Chr2:7064879 Cco05g1196 Cco-Chr5:11119277 4.40E-172 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco02g0698 K00083 - csv:101214622 634.795