Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco02g0737 ATGATGTTGAGGTCGTGTTGCCGGCCGCTCGAGCGGTTCATTGGCCGGTGGAGCGGCGATGGACTGCTCTGGCAGTCGGAATTGAAGCCTCATGCCTCTGGTGATTACTCAATCGCTGTTGTTCAGGCTAATTCTTGTCTTGAGGATCAGAGTCAGGTCTTCACGTCTCCTTCTGCTACTTATGTTGGTGTTTATGATGGCCATGGCGGTCCGGAGGCTTCTCGCTTCGTGAATAAGCATCTTTTTCCTTATATGCATAAGTTTGCTTCAGAACAAGGTGGACTATCGGAGGATGTTATTAAGAAGGCATTCAATGCTACAGAAGAGGAGTTTACGCGTTTGGTTAAGCGGGCTTTGCCTGCAAAGCCACAGATTGCTTCAGTTGGATCATGCTGTCTTGTAGGTGCAATTTCAAATACAAAGTTATACATTGCGAATCTCGGTGATTCGAGAGCTGTGCTTGGTCGTAGAGGTTCAGAGAGTAAGATAACACCAGTAGTTGCAGAACGGTTGTCCACCGATCACAATGTTGGAGTAGATGAAGTTAGGAAAGAGGTTGTAGCACTTCATCCTGATGATTCCCATATAGTTGTCTATACTCGTGGAGTTTGGAGGATAAAAGGCATAATTCAGGTTTCAAGATCTATTGGCGATGTATATTTAAAAAAACCTGAGTTCAACCGGGATCCAATATTCCAACAATTTGGGAACCCCGTTCCTTTGAAACGACCAGTAATGACTGCAGAACCATCGATCCTGACACGAGAGCTCAAACCCCAAGATTTATTCCTCATCTTTGCATCAGATGGTCTCTGGGAACAACTGACTGATGAAGCTGCGGTGGAGATAGTTTTCAAGAACCCAAGAGCTGGAATTGCAAAGAGATTAGTGCGTGCTGCCCTCCACGAGGCAGCAAAGAAGCGCGAAATGAGATACTCCGACTTAAAGAAGATCGAAAAGGGGATTCGCCGTCATTTCCACGACGACATCACTGTCATCGTCGTTTATCTCGACCACAATAGAAGCTCACACTCCAATCGAGCAAAGAACACGGTTGCCGGGTACACTAGTGCACCTGTTGACATTTTCTCTCTTAAATCAAACTATGGAGAAGAGGAAAAACTTCACACAATGTTGTGA 1140 45.61 MMLRSCCRPLERFIGRWSGDGLLWQSELKPHASGDYSIAVVQANSCLEDQSQVFTSPSATYVGVYDGHGGPEASRFVNKHLFPYMHKFASEQGGLSEDVIKKAFNATEEEFTRLVKRALPAKPQIASVGSCCLVGAISNTKLYIANLGDSRAVLGRRGSESKITPVVAERLSTDHNVGVDEVRKEVVALHPDDSHIVVYTRGVWRIKGIIQVSRSIGDVYLKKPEFNRDPIFQQFGNPVPLKRPVMTAEPSILTRELKPQDLFLIFASDGLWEQLTDEAAVEIVFKNPRAGIAKRLVRAALHEAAKKREMRYSDLKKIEKGIRRHFHDDITVIVVYLDHNRSSHSNRAKNTVAGYTSAPVDIFSLKSNYGEEEKLHTML 379
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7610993 7613090 - CcPI632755_02g007370.1 Cco02g0737 171494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco02g0737 379 ProSitePatterns PPM-type phosphatase domain signature. 61 69 IPR000222 GO:0043169(InterPro)
Cco02g0737 379 Gene3D - 25 349 IPR036457 -
Cco02g0737 379 PANTHER PROTEIN PHOSPHATASE 29 336 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cco02g0737 379 ProSiteProfiles PPM-type phosphatase domain profile. 35 337 IPR001932 -
Cco02g0737 379 SUPERFAMILY PP2C-like 43 338 IPR036457 -
Cco02g0737 379 CDD PP2Cc 42 337 IPR001932 -
Cco02g0737 379 FunFam Probable protein phosphatase 2C 42 26 345 - -
Cco02g0737 379 SMART PP2C_4 25 335 IPR001932 -
Cco02g0737 379 Pfam Protein phosphatase 2C 56 306 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco02g0737 Cco-Chr2:7610993 Cco10g1737 Cco-Chr10:30917255 8.70E-118 dispersed
Cco02g0737 Cco-Chr2:7610993 Cco02g1308 Cco-Chr2:24825880 1.10E-109 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco02g0737 - - - 0.0