Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco02g0767 | ATGCGGGGACAACATTCTCACCCACTGAAGTCGGGTCTAGCCGGACCCGATGAGGAAAACGAACCAGTTCGCTCGTATCTCCCTGGAATGAACGTCCCGTTAGGCGCCGGAATTCGGAAGAAGGGAACCGGGGTCCGACCATGGCTACTACTGGACTCCACCGGCGGAGCTCAGGTAGTTGAGGCCGGAAAACATGTGATTATGCGGCGGACCGGCCTGCCGGCGCGTGACCTTCGGATTCTCGATCCGTTGCTCTCGTACCCGTCTACGATTCTTGGCCGTGAGAAAGCGATTGTGATCAATTTGGAGCACATCAAAGCAATTATCACTGCTCAAGATGTGTTCGTGTTGAATGCTAGGGATCCGTCTGTAACCCCCTTTGTAGAGGAGCTTCAGAGACGGGTATTGCGGCACCATCAAGCCACTAAGGCTTCTCAGGAGGGCGTTGGTGATGATTCTAATTGGAGAAATCTATATGACCTGGAGGAGCCTCGTTCAAGGACTCAAAGTCCTCCTAATTCATACCAAGGATTTCCACAGGCTGAAGAGGAGGAGGGGAAGGAAAACATGAAACAAAGTCTTGAAAATCGGGAGGGATTGAAGGTTCTTCCTTTTGAGTTTGTTGCTTTGGAGGCATGCCTTGAAGCTGCTTGCAGTTGCTTAGAAAGCGAAGCAGATACATTGGAGCTAGAAGCTCACCCAGCTTTGGATAAGCTGACTTCTAAGATTAGTACTCTCAATTTGGAACGGGTGCGTCAGATCAAAAGTCGATTGGTTGCAATAACTGGACGAGTTCAAAAGGTGCGGGATGAATTAGAACACTTGCTAGATGATGATGAGGATATGGCTGAGATGTACTTAACAGAAAAGATGGTTCAGCAACAACTTGAGAACTCTTCCACTTCCTCAATTCCTGAGAGAGATGAAATGGAAGATGACGATCAGCAGTTGGGCAAAGATGACAGTATTCCTGCTGAAATATCATTGGACGGTGGTGGAATTTCTGCTAATTATGAAGGCAATATGGATGCTTCCCAGGATCATTTGTTTGGTGCATCAAATGTGGGCAGGGACAGCCATGGGACCCGGACAAGCACTACCCATAGCGCTATAAGCAAACACCTTGATGTGGAGGAACTCGAGATGCTTTTGGAGGCATACTTTGTGCAAATTGATGGTACACTAAACAAACTTTCCACGCTGAGGGAGTATGTAGATGACACAGAAGATTACATCAACATAATGCTGGATGACAAACAGAATCATCTTCTACAAATGGGAGTAATGTTGACAACGGCAACCCTTGTCGTCAGCGCTTTTGTCGTGGTGGCAGGTATCTTCGGGATGAACATCCATATTGAACTGTTTGAACCTGAAAAAGCAGGCATGCCGGAGTTCCTATGGACTGTTGGTGGTGGTGCTACCGGAACCATCTTCTTGTATGTCATTGCCATTGCCTGGTGTAAGCACAAACGCTTGCTCGAGTAG | 1488 | 47.85 | MRGQHSHPLKSGLAGPDEENEPVRSYLPGMNVPLGAGIRKKGTGVRPWLLLDSTGGAQVVEAGKHVIMRRTGLPARDLRILDPLLSYPSTILGREKAIVINLEHIKAIITAQDVFVLNARDPSVTPFVEELQRRVLRHHQATKASQEGVGDDSNWRNLYDLEEPRSRTQSPPNSYQGFPQAEEEEGKENMKQSLENREGLKVLPFEFVALEACLEAACSCLESEADTLELEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDEDMAEMYLTEKMVQQQLENSSTSSIPERDEMEDDDQQLGKDDSIPAEISLDGGGISANYEGNMDASQDHLFGASNVGRDSHGTRTSTTHSAISKHLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGIFGMNIHIELFEPEKAGMPEFLWTVGGGATGTIFLYVIAIAWCKHKRLLE | 495 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 8113785 | 8118378 | - | CcPI632755_02g007670.1 | Cco02g0767 | 171524 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco02g0767 | 495 | Coils | Coil | 211 | 231 | - | - | |
Cco02g0767 | 495 | PANTHER | RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL | 36 | 493 | IPR039204 | GO:0015095(PANTHER)|GO:0015693(PANTHER) | |
Cco02g0767 | 495 | MobiDBLite | consensus disorder prediction | 162 | 192 | - | - | |
Cco02g0767 | 495 | FunFam | Magnesium transporter MRS2-1 | 36 | 119 | - | - | |
Cco02g0767 | 495 | Gene3D | - | 37 | 119 | - | - | |
Cco02g0767 | 495 | Gene3D | Magnesium transport protein CorA, transmembrane region | 181 | 423 | - | - | |
Cco02g0767 | 495 | Pfam | Magnesium transporter MRS2-like | 373 | 418 | - | - | |
Cco02g0767 | 495 | Pfam | Magnesium transporter MRS2-like | 188 | 294 | - | - | |
Cco02g0767 | 495 | Pfam | Magnesium transporter MRS2-like | 53 | 137 | - | - | |
Cco02g0767 | 495 | MobiDBLite | consensus disorder prediction | 293 | 325 | - | - | |
Cco02g0767 | 495 | CDD | Mrs2_Mfm1p-like | 48 | 493 | IPR039204 | - | |
Cco02g0767 | 495 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco02g0767 | Cco-Chr2:8113785 | Cco10g1274 | Cco-Chr10:25569569 | 7.70E-90 | dispersed | |
Cco02g0767 | Cco-Chr2:8113785 | Cco07g0064 | Cco-Chr7:611745 | 1.00E-73 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco02g0767 | - | - | - | 0.0 |