Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco02g0767 ATGCGGGGACAACATTCTCACCCACTGAAGTCGGGTCTAGCCGGACCCGATGAGGAAAACGAACCAGTTCGCTCGTATCTCCCTGGAATGAACGTCCCGTTAGGCGCCGGAATTCGGAAGAAGGGAACCGGGGTCCGACCATGGCTACTACTGGACTCCACCGGCGGAGCTCAGGTAGTTGAGGCCGGAAAACATGTGATTATGCGGCGGACCGGCCTGCCGGCGCGTGACCTTCGGATTCTCGATCCGTTGCTCTCGTACCCGTCTACGATTCTTGGCCGTGAGAAAGCGATTGTGATCAATTTGGAGCACATCAAAGCAATTATCACTGCTCAAGATGTGTTCGTGTTGAATGCTAGGGATCCGTCTGTAACCCCCTTTGTAGAGGAGCTTCAGAGACGGGTATTGCGGCACCATCAAGCCACTAAGGCTTCTCAGGAGGGCGTTGGTGATGATTCTAATTGGAGAAATCTATATGACCTGGAGGAGCCTCGTTCAAGGACTCAAAGTCCTCCTAATTCATACCAAGGATTTCCACAGGCTGAAGAGGAGGAGGGGAAGGAAAACATGAAACAAAGTCTTGAAAATCGGGAGGGATTGAAGGTTCTTCCTTTTGAGTTTGTTGCTTTGGAGGCATGCCTTGAAGCTGCTTGCAGTTGCTTAGAAAGCGAAGCAGATACATTGGAGCTAGAAGCTCACCCAGCTTTGGATAAGCTGACTTCTAAGATTAGTACTCTCAATTTGGAACGGGTGCGTCAGATCAAAAGTCGATTGGTTGCAATAACTGGACGAGTTCAAAAGGTGCGGGATGAATTAGAACACTTGCTAGATGATGATGAGGATATGGCTGAGATGTACTTAACAGAAAAGATGGTTCAGCAACAACTTGAGAACTCTTCCACTTCCTCAATTCCTGAGAGAGATGAAATGGAAGATGACGATCAGCAGTTGGGCAAAGATGACAGTATTCCTGCTGAAATATCATTGGACGGTGGTGGAATTTCTGCTAATTATGAAGGCAATATGGATGCTTCCCAGGATCATTTGTTTGGTGCATCAAATGTGGGCAGGGACAGCCATGGGACCCGGACAAGCACTACCCATAGCGCTATAAGCAAACACCTTGATGTGGAGGAACTCGAGATGCTTTTGGAGGCATACTTTGTGCAAATTGATGGTACACTAAACAAACTTTCCACGCTGAGGGAGTATGTAGATGACACAGAAGATTACATCAACATAATGCTGGATGACAAACAGAATCATCTTCTACAAATGGGAGTAATGTTGACAACGGCAACCCTTGTCGTCAGCGCTTTTGTCGTGGTGGCAGGTATCTTCGGGATGAACATCCATATTGAACTGTTTGAACCTGAAAAAGCAGGCATGCCGGAGTTCCTATGGACTGTTGGTGGTGGTGCTACCGGAACCATCTTCTTGTATGTCATTGCCATTGCCTGGTGTAAGCACAAACGCTTGCTCGAGTAG 1488 47.85 MRGQHSHPLKSGLAGPDEENEPVRSYLPGMNVPLGAGIRKKGTGVRPWLLLDSTGGAQVVEAGKHVIMRRTGLPARDLRILDPLLSYPSTILGREKAIVINLEHIKAIITAQDVFVLNARDPSVTPFVEELQRRVLRHHQATKASQEGVGDDSNWRNLYDLEEPRSRTQSPPNSYQGFPQAEEEEGKENMKQSLENREGLKVLPFEFVALEACLEAACSCLESEADTLELEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDEDMAEMYLTEKMVQQQLENSSTSSIPERDEMEDDDQQLGKDDSIPAEISLDGGGISANYEGNMDASQDHLFGASNVGRDSHGTRTSTTHSAISKHLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGIFGMNIHIELFEPEKAGMPEFLWTVGGGATGTIFLYVIAIAWCKHKRLLE 495
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8113785 8118378 - CcPI632755_02g007670.1 Cco02g0767 171524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco02g0767 495 Coils Coil 211 231 - -
Cco02g0767 495 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 36 493 IPR039204 GO:0015095(PANTHER)|GO:0015693(PANTHER)
Cco02g0767 495 MobiDBLite consensus disorder prediction 162 192 - -
Cco02g0767 495 FunFam Magnesium transporter MRS2-1 36 119 - -
Cco02g0767 495 Gene3D - 37 119 - -
Cco02g0767 495 Gene3D Magnesium transport protein CorA, transmembrane region 181 423 - -
Cco02g0767 495 Pfam Magnesium transporter MRS2-like 373 418 - -
Cco02g0767 495 Pfam Magnesium transporter MRS2-like 188 294 - -
Cco02g0767 495 Pfam Magnesium transporter MRS2-like 53 137 - -
Cco02g0767 495 MobiDBLite consensus disorder prediction 293 325 - -
Cco02g0767 495 CDD Mrs2_Mfm1p-like 48 493 IPR039204 -
Cco02g0767 495 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco02g0767 Cco-Chr2:8113785 Cco10g1274 Cco-Chr10:25569569 7.70E-90 dispersed
Cco02g0767 Cco-Chr2:8113785 Cco07g0064 Cco-Chr7:611745 1.00E-73 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco02g0767 - - - 0.0