Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco02g1456 ATGGTACTCGAAGTTGCGGTCAAGGCTGCCACTGGTGCACCTGATGTGCTTGGGGACTGCCCTTTCTGCCATAGAGTTCTCTTAACTTTGGAGGAGAAGAAAGTTCCTTACAAATGGCATCTCATCAATCTATCCGAAAAACCCAGTTGGTTATTTGAAGTGAGCCCAGAAGGGAAGGTGCCGTTGGCGAAGTTTGATGGCAAATGGGTTCCTGATTCTGATGTCATTGTGGGGATTCTTGAGGAGAAGTATCCAGAGCCTTCTCTTGTTACTCCTCCTGAATTTTCTTCTGTGGGATCAAAGATGTTTGGTGCTTTTGTAAAATTCTTGTTAAGCAAGGACCCAAATGATGGTTCAGAGCAGGCTTTCCTTGAAGAGTTGAAGGCGCTCAATGAGCATCTTAAGGCTCATGGTCCTTATGTTGCTGGAGAGAAGGTAACTGCTGTTGATTTGAGCCTGGCACCAAAGTTGTACCATGTTGATGTTGCTCTTGGCCATTTTAAGAAGTGGTCTATCCCCAAAGACTTGCCCAGTTTAATCGCCTACAAGGAGTTGCTTTACGCTCGAGAATCTTTCGTGAAGACGAAAACTGCCCCGGAATATGTAATTGCTGGATGGGGGACCAAGGTGAATCCTGCATGA 642 45.95 MVLEVAVKAATGAPDVLGDCPFCHRVLLTLEEKKVPYKWHLINLSEKPSWLFEVSPEGKVPLAKFDGKWVPDSDVIVGILEEKYPEPSLVTPPEFSSVGSKMFGAFVKFLLSKDPNDGSEQAFLEELKALNEHLKAHGPYVAGEKVTAVDLSLAPKLYHVDVALGHFKKWSIPKDLPSLIAYKELLYARESFVKTKTAPEYVIAGWGTKVNPA 213
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 26979410 26982687 - CcPI632755_02g014560.1 Cco02g1456 172213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco02g1456 213 SUPERFAMILY Thioredoxin-like 19 87 IPR036249 -
Cco02g1456 213 CDD GST_N_family 20 77 - -
Cco02g1456 213 Pfam Glutathione S-transferase, N-terminal domain 20 82 IPR004045 -
Cco02g1456 213 SUPERFAMILY GST C-terminal domain-like 84 210 IPR036282 -
Cco02g1456 213 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 84 213 IPR010987 -
Cco02g1456 213 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 3 208 IPR044627 GO:0010731(PANTHER)|GO:0033355(InterPro)|GO:0045174(InterPro)|GO:0045174(PANTHER)|GO:0098869(InterPro)
Cco02g1456 213 FunFam Glutathione S-transferase DHAR3, chloroplastic 90 212 - -
Cco02g1456 213 Pfam Glutathione S-transferase, C-terminal domain 119 182 - -
Cco02g1456 213 Gene3D - 90 212 - -
Cco02g1456 213 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 10 88 IPR004045 -
Cco02g1456 213 Gene3D Glutaredoxin 1 89 - -
Cco02g1456 213 SFLD Glutathione Transferase (cytosolic) 20 187 IPR040079 -
Cco02g1456 213 FunFam Glutathione S-transferase DHAR3 chloroplastic 1 89 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco02g1456 Cco-Chr2:26979410 Cco05g1317 Cco-Chr5:13578245 1.20E-71 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco02g1456 K21888 - csv:101203666 354.755