Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco02g1629 ATGGGAGGTTTGAGTGAGGGTCTAACACAGTTGCTGATACCTGCTGCTGCTCTGCTTGGTATTGGATTTGCCCTTCTTCAATGGCTTTTGGTTTCAAGAGTTAAGGTTTCTAGCTACCCTGATGATGAAAGCCAAGAAAACAACTTGATTGAAGGAGGACAAGAGGAAGGTATTGATGATGTCGAGGTTGTCGCAAAGTGTGCCGAAATCCAGAAGGCAATTTCTGTTGGAGCAACCTCATTTTTATTCACCCAGTATAAATACCTTGTTGTCTTCATGGGAGTATTTGGAGCCATCATTTTTCTGTTTCTTGGTTCTGTTAAGAGATTCAGCACCAAAAGTGAACCTTGCACATACAACAAGGGACAGATGTGTAAACCAGCTCTAGCCAATGCCATTTTTAGCACAATTGCCTTCTTGCTAGGTGCTCTCACCTCAGTTCTATCTGGTTTCCTTGGAATGAAGATTGCAACTTATGCCAATGCGCGAACGAGTCTAGAAGCACGGAAAGGCATTGGAAGAGCATTCGTTATTGCTTTTCGCTCCGGTGCTGTGATGGGATTCCTTCTAGCTGCCAATGGCCTCCTTGTTTTATATGCCTCCATCAATTTGTTTAAGCTGTATTATGGCGATGATTGGGAAGGACTGTACGAATCTATCACGGGCTACGGTCTTGGAGGTTCTTCAATGGCGCTTTTTGGAAGAGTTGGGGGCGGCATATACACAAAAGCAGCTGATGTTGGAGCTGATCTTGTAGGGAAAATTGAAAAGAATATTCCTGAAGACGATCCACGAAATCCTGCTGTCATAGCTGACAATGTGGGTGACAATGTAGGAGATATTGCAGGAATGGGATCTGACTTATTTGGATCTTATGCAGAATCAACCTGTGCTGCACTTTTCGTGGCATCGATATCGTCCTTCGGCTCTACACATAATTATGCAGCCATGTCCTACCCTCTACTTGTAAGCTCAATGGGAATTGTGATTTGCTTAATAACTACACTTTTTGCAACTGACCTCATTGAGATTAAGAAAGTGAGCGAAATCGAACCGTCATTAAAACGACAACTTCTTATCTCCACCGTGCTGATGACAGTAGGGGTAGCTTTAGTTAGCTTCATTGCTTTGCCTTCAAAATTCACTCTTTACGATTTCGGCATCGATAAGGTCGTAAAGAACTGGCACATTTTCTTTTGTGTGGTGACAGGATTGTGGGCAGGACTTGTTATTGGGTACACAACTGAGTATTACACTAGCAATGCTTACAGTCCAGTGCAGGATGTGGCTGATTCTTGCAGAACCGGTGCCGCAACGAATGTAATATTTGGATTAGCTCTCGGTTACAAATCCGTCATCATTCCCATATTTTCAATCGCTTTATCCATTTATGTGAGCTTCCGCTTGGGAGCCATGTATGGTATTGCAATGGCTGCTTTGGGAATGCTTAGCACCATTGCCACTGGTCTAGCCATTGATGCTTATGGTCCAATAAGTGACAATGCAGGTGGAATAGCCGAAATGGCTGGAATGAGCCACGAGATACGCGAAAGAACCGATGCTTTAGATGCTGCAGGAAACACGACTGCAGCCATCGGAAAGGGCTTTGCCATTGGATCAGCTGCTCTTGTTTCCCTCGCCTTGTTCGGCGCCTTCGTGAGCCGAGCAGGCATCGAAGCAGTCAACGTCATGAACCCGAAAGTTTTCATTGGGTTGATAGTAGGTGCAATGCTTCCATACTGGTTTTCAGCCATGACAATGAAGAGTGTTGGGAGGGCAGCACTGAAGATGGTGGAGGAAGTTCGACGACAATTCAACTCCATCCCAGGGCTGATGGAAGGCAGGACGAAGCCGGACTATGCAAATTGTGTGAGGATATCGACCGATGCTTCGCTTAGGGAGATGATCCCACCTGGTGCTCTTGTTTTGGTAACACCACTCATTGCTGGAACATTCTTTGGAGTTGAAACTCTTGCTGGACTTCTGGCTGGTTCCCTTGTTTCTGGAGTGCAGGTTGCTATCTCTGCTTCAAACACAGGTGGGGCTTGGGATAATGCAAAAAAGTACATAGAGGCAGGAAGAAGTGAACATGCTAAAGCACTTGGTCCTAAAGGGTCAGATGCTCACAAGGCAGCTGTGATAGGGGACACAATTGGGGATCCTCTCAAAGACACTTCTGGCCCATCACTTAATATTCTCATCAAGCTTATGGCTGTTGAGTCTTTGGTTTTTGCCCCTTTTTTTGCTGCTCATGGCATAAGTCAAGAATGGAGCTCCTGTTCGAAGCGTACTTGTTCGCCACACGCCATTTTGGAGAAATCGAGACTGGGGGGAAAGAGCAACCAACTCTTAGGATATGTCTCGAATGCTTTTCTTTCGCCATCTCCAAGTATACCAACAGACATAACTGAAACAAAAAGAAGATGCGAACGGGGCAGGAGCACATCGAGCTATACAGAGGTTGCGAGCCGAGCAGACTTGCCGAACTGGAAGCCTGGACCGGTCATGGTTGGGGTTTTCAATGATATACCTTCAACTGCTGAGAAGTTTGGTGGTTCGGCTCCTTCACTAAATAGATGTAGCATGTTCAACAATATGATGAATGCTTGTGGCCTCATGGACCTGGGATTCCAAGGTCCTTTATTCACTTGGAGCAACAAGAGAAAGGGTCTTGCAAGAAATGAGTGGAGGTAG 2694 45.66 MGGLSEGLTQLLIPAAALLGIGFALLQWLLVSRVKVSSYPDDESQENNLIEGGQEEGIDDVEVVAKCAEIQKAISVGATSFLFTQYKYLVVFMGVFGAIIFLFLGSVKRFSTKSEPCTYNKGQMCKPALANAIFSTIAFLLGALTSVLSGFLGMKIATYANARTSLEARKGIGRAFVIAFRSGAVMGFLLAANGLLVLYASINLFKLYYGDDWEGLYESITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKIEKNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESTCAALFVASISSFGSTHNYAAMSYPLLVSSMGIVICLITTLFATDLIEIKKVSEIEPSLKRQLLISTVLMTVGVALVSFIALPSKFTLYDFGIDKVVKNWHIFFCVVTGLWAGLVIGYTTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFSIALSIYVSFRLGAMYGIAMAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHEIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGIEAVNVMNPKVFIGLIVGAMLPYWFSAMTMKSVGRAALKMVEEVRRQFNSIPGLMEGRTKPDYANCVRISTDASLREMIPPGALVLVTPLIAGTFFGVETLAGLLAGSLVSGVQVAISASNTGGAWDNAKKYIEAGRSEHAKALGPKGSDAHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFAAHGISQEWSSCSKRTCSPHAILEKSRLGGKSNQLLGYVSNAFLSPSPSIPTDITETKRRCERGRSTSSYTEVASRADLPNWKPGPVMVGVFNDIPSTAEKFGGSAPSLNRCSMFNNMMNACGLMDLGFQGPLFTWSNKRKGLARNEWR 897
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 28901797 28910004 + CcPI632755_02g016290.1 Cco02g1629 172386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco02g1629 897 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 7 749 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Cco02g1629 897 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 12 752 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Cco02g1629 897 Pfam Inorganic H+ pyrophosphatase 48 744 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Cco02g1629 897 NCBIfam V-type H(+)-translocating pyrophosphatase 9 753 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco02g1629 Cco-Chr2:28901797 Cco06g1353 Cco-Chr6:24028856 0.00E+00 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco02g1629 K23025 - csv:101205277 1415.98