Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cco02g1635 ATGATGAGAGGTGATGGTGATGGTGATGGTGATGGTGATGGTGATGGTGATGGAGCAAAAGGAAACCGGAAACCGCCGCCGGCCGGCGAACGGAGATTAGGGGCGTTGCGAGCATCGAACTCACAACCTCTCGCACCCGAAGCGAGAATCATACCACTAGACCAAACGCCCTTTAGGTCAAGGTTGTTTTGGGCAGCGATGGCTCATACCAGCAATACTGCAGCTGGAGTTGATAACACCTTTAGAAGGAAATTTGATCGGGAGGAGTATTTGGAACGAGCTCGTGAGCGTGAAAAACAGGAGGTTGAGAGGGTTAAGTCCAAATTGAAAGGTCCACCAGTGCAAAGAAAACCATTGAAACATAGAGATTACGAGGTAGACCTTGAGTCCCGATTGGGAAAAACCCAGGTTGTCACTCCAGTTGCACCTCTAAGCCAGCAGGCTGGATACTACTGTTCTGTTTGTGAATGTGTAGTCAAGGATTCCGCAAATTACTTGGATCATATCAATGGAAAGAAACATCAGAGAGCCTTGGGTATGTCCATGCGGGTAGAACGGGCATCTCTTGAACAGGTGCAGGAGCGGTTTGAAGTTCTTAAAAAGAGAAAAACGCCAGGAAGCTTCACAGAGCAAGACCTTGAAGAGCGTATACTAAAGCAACAACAAGAAGAAGAACAACGAAAGCGTGAGCGACGAGAAAGGAAGAAAGAAAAGAAGAAAGAGAAGGCTGCAGAAGAGGAACCTGAAGTAGATCCTGATGTTGCAGCAATGATGGGATTTGGAGGGTTCCGTTCATCAAAGAAGTGA 807 47.34 MMRGDGDGDGDGDGDGDGAKGNRKPPPAGERRLGALRASNSQPLAPEARIIPLDQTPFRSRLFWAAMAHTSNTAAGVDNTFRRKFDREEYLERAREREKQEVERVKSKLKGPPVQRKPLKHRDYEVDLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERFEVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAAMMGFGGFRSSKK 268
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 28941802 28949030 - CcPI632755_02g016350.1 Cco02g1635 172392
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cco02g1635 268 Coils Coil 210 247 - -
Cco02g1635 268 MobiDBLite consensus disorder prediction 203 268 - -
Cco02g1635 268 MobiDBLite consensus disorder prediction 1 48 - -
Cco02g1635 268 PANTHER ZINC FINGER MATRIN-TYPE PROTEIN 2 74 268 IPR040107 GO:0000398(PANTHER)|GO:0000398(InterPro)|GO:0005681(InterPro)|GO:0046540(PANTHER)
Cco02g1635 268 Coils Coil 182 202 - -
Cco02g1635 268 Coils Coil 88 108 - -
Cco02g1635 268 FunFam zinc finger matrin-type protein 2-like 144 182 - -
Cco02g1635 268 MobiDBLite consensus disorder prediction 1 27 - -
Cco02g1635 268 Gene3D Classic Zinc Finger 145 182 - -
Cco02g1635 268 SUPERFAMILY beta-beta-alpha zinc fingers 146 191 IPR036236 -
Cco02g1635 268 Pfam Zinc-finger of C2H2 type 150 174 IPR013087 -
Cco02g1635 268 MobiDBLite consensus disorder prediction 203 249 - -
Cco02g1635 268 SMART ZnF_U1_5 147 181 IPR003604 GO:0003676(InterPro)|GO:0008270(InterPro)
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco02g1635 K12848 - csv:101206387 326.25