Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco02g1746 ATGTTGAGATTCCATGTGGGCGGGAAGGTGGTCGAGAGAGTTGACTTGTTGAGTAAGAAGCACTGGGCATGGCGGTTCGATCTGTGGCCATTTGCCATTCTTTATGCGGCCTGGCTTGCCGTTGTTGTTCCTAGTATAGACTTTGGGGATGCTTTCATTGTTTTAGGTGGACTTGCGGCTCTTCATGTTCTGGTCTTGCTTTTCACTGCTTGGTCGGTTGATTTCAAATGTTTTGTCCAGTACAGTCAGGTTAATGATATTTACCGTGCTGATACATGCAAGATAGTTCCAGCAAAATTTTCGGGCTCAAAAGAAATTGTTTCACTTCATTTTCGTAAGCTTCTGGCAGGTTCTGCATCTGCAGTTGACCTTGAGGAGATCTACTTTGATTTTAGGAAACAACGATTTATTTATTCAAAGGAGAAGGAGACATTCTGCAAGCTTCCTTACCCAACAAAAGAAACTTTTGGTTATTATCTAAAGAATACTGGCTATGGGTCCGAGCCTAAAGTTGTAGCTGCTGTTGAAAAATGGGGGCGCAATATATTCGAGTATCCACAACCTACGTTTCAGAAATTAATGAAGGAGCAGTGTATGGAACCATTTTTTGTGTTTCAGGTTTTTTGTGTGGGACTATGGTGTTTGGATGAGTATTGGTATTACAGCCTGTTTACTCTGTTTATGCTGTTCATGTTTGAGTCAACAATGGCAAAAAGTCGGTTAAAGACCTTAAGTGAGTTAAGACGTGTCAGAGTGGATACTCAGACCTTAATGGTGCACCGTTGTGGAAAGTGGGTGAAGCTACCTGGAACTGAGCTTTTGCCAGGAGATGTTGTCTCCATAGGGCGTGATTCTGGTCAGAGTGGTGAAGATAAATCCGTACCTGCTGATATGCTTATTTTGGCTGGAAGTACTATTGTTAATGAAGCCATTCTTACTGGGGAGTCTACACCACAATGGAAGGTTTCAATAACTGGGAGAGGAATTGAGGAGAAGTTATCAGCTAAGAGAGACAAAAGTCATGTGTTATTTGGTGGGACCAAAATACTCCAGCATACTCCGGATAAGACCTTTCCTCTTAGAACCCCTGATGGTGGCTGCCTAGCAGTTGTTTTGCGAACTGGATTTGAAACAAGTCAAGGGAAACTAATGCGCACAATTTTGTTTTCTACAGAGAGGGTTACAGCTAACAGTTGGGAAAGTGGCCTATTTATTTTGTTCTTAGTTGTATTTGCAGTTATAGCTGCTGGTTACGTACTTGTAAAGGGGTTGGAAGATCCCACGAGAAGCAAGTACAAGCTTTTCCTTAGTTGCTCACTTATAATCACCTCTGTTATTCCTCCTGAACTACCAATGGAACTGTCAATAGCAGTTAATACATCGTTAATTGCTCTAGCACGCCGTGGAATATTTTGTACAGAGCCTTTCCGGATACCATTTGCTGGAAAGGTTGATATTTGTTGTTTTGATAAAACTGGAACATTGACATCAGATGACATGGAGTTTCGAGGAGTAGTTGGGTTGAGTGATAAGGAGGATTTGGAAACTGACATGACTAGTGTGTCTTTGCGTACAGTCGAAATTCTGGCTTCTTGTCATGCATTGGTGTTTGTGGACAACAAGTTGGTGGGGGATCCTCTTGAAAAGGCTGCTCTCAAGGGAGTTGATTGGATTTACAAATCTGATGAGAAAGCGATTCCCAGAAAGGGAAGTGGCCACGCTGTCCAAATTGTTCAGAGGCACCACTTTGCTTCACATTTGAAGAGAATGGCAGTTGTTGTGCGCCTTCAAGAGGAATTTTTTGCATTTGTGAAGGGCGCCCCCGAAACCATCCAGGAGAGGCTCACTGATATACCTTCATTTTATGTTGAGACATATAAGAAATATACACGACAAGGTTCCCGTGTCCTTGCTCTTGCTTATAAATCACTTCCAGACATGACAGTTAGTGAAGCTAGAGGCCTGGATAGGGACACGGTAGAGAGTGACCTGACATTTGCTGGTTTTGCGGTGTTCAATTGTCCAATTAGAGCAGATTCGGCTACAGTATTATCTGAGCTTAAAGGGTCATCCCATGACTTGGTAATGATTACTGGTGACCAAGCTTTAACAGCGTGCCATGTTTCTAGCCAAGTTCATATTACATCAAAGCAGATTTTAATTCTCAATTCAATGAAGGGAACTGAGGAATATGAATGGCTTTCCCCAGATGAGTCACAGACAGTTCCCTACAGAGAGAAAGAGGTGGGAACTTTATCGGAGACATATGATCTTTGTATTGGAGGTGACTGCATCGCAATGCTACAACGCACCTCTACTGTGCTGGATGTTATTCCATACGTTAAGGTTTTTGCAAGAGTTGCTCCTGAGCAGAAAGAACTCATTTTGACAACTTTCAAAACAGTTGGAAGAATGACGTTAATGTGTGGGGATGGAACGAACGATGTTGGAGCTTTGAAGCAGGCCCATGTAGGAATTGCTCTCCTAAACGCAGTCCCTCCTCCTCAAAGTGGCAACTCTTCTTCAGAAGCATCTAAAGATGAGGCTGTACGGTCTGCAAAGTCAAAGAAGTCTAAGCCTTCATCCGAATCATCAGGAAAAGCACTTGTAAGTGGAGAAGGTTCTTCAAAAAGCAAAGGTGGTGCAAAACTGGATTCTGCTGCTGAGCAAGCAAGTAACCGTCCACGGACACCTGCAGAGATGCAAAGACAGAAGCTAAAGAAACTTATGGATGAGTTAAATGAAGAGGGCGATGGGCGCTCTGCCCCTATTGTCAAGCTTGGAGATGCATCCATGGCATCACCATTCACCGCAAAGCATGCCTCTGTTGCTCCTACTACTGACATTATTCGCCAAGGCCGAAGTACTCTAGTGACAACTCTACAGATGTTCAAAATACTTGGTCTCAACTGCCTCGCTACTGCCTACGTACTGAGTGTTATGTATTTGGATGGTGTAAAGCTTGGCGATATTCAAGCCACTATCAGTGGAGTATTCACAGCAGCCTTTTTTCTCTTCATCTCACATGCGCGGCCCCTTCCAACACTCTCAGCTGAACGCCCCCATCCACACGTCTTTTGCTCTTACGTTCTCCTTTCTCTGTTGGGCCAATTTGCAATCCACTTATGTTTCTTAATTTCTTCGGTTAAAGAAGCTGAAAAGCACATGCCTGATGAATGTATAGAGCCAGACTCAGATTTTCATCCCAACTTGGTTAACACGGTTTCATACATGGTAAGCATGATGCTTCAGGTGGCAACCTTTGCTGTAAACTACATGGGTCATCCCTTCAACCAGAGTGTATCCGAAAACAAGCCGTTCTTATACGCCCTCTTGGCTGCAGTCGGTTTTTTCACTGTTATTACATCTGATTTGTTTAGAGATCTCAATGACTGGCTGAAACTTGTTCCATTGCCTGTGGGAATGAGGGATAAGCTTCTGGCTTGGGCACTTCTTATGTTCTTGTGCTGTTACTCTTGGGAAAGACTGTTGAGATTTATGTTCCCAGGTAAAATCCCGGCATGGCAGAAGCGACAGCGACTGGTGGCTGCTAATCTGGAGAAGAAGAAACAGGTTTCCGAGGGAGAGTCAGGGAAACGAGATGGACCTAATGTCTTGGTGTTTTTGTTGCGAGGACAAGAAAGGCTCAACATGACACAGCGCCTTTCTTTTGGAATCCAGACAAATGCTAGTCTCATCATGAAACAAGATTCAAATATGGAAGCAAATTCTGCTTTGCTTGAATGTGAGAAGGAAGTAGGTATATCTAATGTACAGGAAGCTGGGGGGAATGTAGAAGAGTTCTCAACTGAACACGAAGGCAAGAGGAAAGAAGCAGGGTCTTCGGCAGTTCAAGAAGATAGCATAATGAAAGAAGACTTTCCCGCGGAACAAGCAGATGACATGAAAGAAGCCGTAGCTGAAGTTAGGAACACTGTTGAAGTTGGGAAGTCGGATGAAAAGTGCATTGAAGAAGGGTTGCGTAAAAAGAAAATTGTAAAAGTTTTGAAGGTCAAAAAGAAAATTATAAAGAAATCCCCAGCTAGCGGTGTGTTGAAGAGAAAAAAGGCACAAGTTGAACAGGAAGATGACAAAAAGGAAAAAGTGGTTCGTGTAGCTCAAGAGGAAGAGACACAGGTTGAACAGGAAGATGACAAAAAGGAAAAAGAGGTTCCTGTAGCTCAAGAAGTGGAAGAAACACTTGAACCCCAGAATCCCACCGAAAATTCCAAATCAGAGTTAAAGGTTCCTATAGATCAAGAAGTGGAAGAAACAGCTAAACCTCAGAAACCCATTGAAAATTCCAAACCAGAGTCAAAGGCGAAGAAGAATAACAAAGTTTTGAAGGTCAAAAGGAAAATTGTAAAGAAATCTCCGGCCAACAGTCAAAAGAAGACTAATAATCTTCAGAGTAGTCCTAAGGTGCAGGTTAGAAAGAAAGTGGAGAATAGTAAGAGTTCGTTGCAGGAAAATGGGGAAGGTAGTGAAAAGAAGGTAGAGGATACGGAGAAGCCTAACCAAAAGGAAAATGTTAAAAAAAGTATCTCAAAAGAGGAGCATATTGAAAAGGGAGAAGAGACTTCTAATAGTCATAAACACAAGTTTGAGTCTAAAAATAGCATAAAAGGGAAAGTCATGGAGAAGGTTGGTTCTTCAGATAAGAGCACAAAGAATCAGAATAAAGAAGAGGATAGAGAGAAAAAGAGTCAAAGAGAAGATAAACATAAAGAAAATCTTGGAGGACTGATTTTCATGTGCAGTGCAAAAACGAAGCCGGATTGTTTTAACTACAATGTAATGGGTGTTTCTGCCGGCAAAAAGGATGTTGTCTTGGCAATTAAACCTGGGTTGAAGCTCTTTCTCTACGATTTTGATCTCAGGCTTCTGTATGGGATTTATAAAGCATCCTCTTCCGGTGGCATGAAACTTGAGCCAAAGGCTTTTAATGGGGCTTTCCCTGCTCAGGTGCGGTTCAATATTTACAAGGATTGTTTTCCACTACCTGAAAGTATTTTCAAGAAGGCTATCCAAGAGAACTATTATGAGAAGCACAAGTTCAAAGCTGAACTCACGGTTAAACAGGTTAGGAAGCTCTCAGATCTTTTTCGACCAATTGGACTCCACTCGAGTTCTGCTCTTGTTCGGTCCCATGCGGAGGTACCAATTAAGAATAGAAATGTTCATGGGGAAGCTAAAGACATTCGGGTTAGGAACTCTAAGTCCAAGGGTGATGCCAGGAAATACCATTTGTCATCTCATGGAAGGGGTCGACATCGAGAAGAGGCACCTAGACATAGAGAGGAAGTTCCTCGTGATTTATACCTAAGCGAAAAGGACTATCGAACATATGGTCTTCGATCAGAGAGGAGAAATTTAGATCCTGTGTCTCGACCTTCTTTAGAAACATACAGCAGAGATCACGATACGGACTATCAACTGAGACATCTAGAGCCTAGATATAGTGACGATGTCTCTACACACGCACAGAGAGAAATAGTTCGCGCGGATCATGTATACTTTAATGGGAAAGATTATCCAGTTTACGGTATTGATTCTAGACATCAAATATCACCTTCTAGAGCAATATCTGCTAGTGGGTTGGAACGCAATACTTATGATTCGATTTACACTCGTCAATATGGCCTTCCTTCAATTGATCCATATCTCCTTCCTTCAAGGAGGGAGGAAGCAGCCCCTTCAACTTATTCAAGAAGTTATCTTGCTGATACTGAACCCATGAGACATGCGGCTGGAGCTCTATCGCATTACACTCAAGCGCATCACAAAGAAGTGGAAAATGATACAATGCCGGTTTCATCGCGACTGAAGTCCTTGCCCCTCCCACTACCATCTGCTTCTTCACCTTCACCTCGATTGCTTTGCACTCGAGTTGACTACTTTAATGAACCTGATGTCATTTACTTGTTCCAAACCCTTGGCATTAGAATTCCATCACAAAAATGGAGTATTCCGCTCCAGTTTTGCTCCTGGGTTCTATGCCGAGATGGCCAGAGACAACAGGGTTTCAATGTCCTAGATACTGGGAATTTGGTTTTGAAGAGCAAAAGTGGAATGTTTGTTTGGCAGAGATTCCAAACTGGCAAGAAAGGAAAAAGAAAAATCCGATGTTACAAATGCGGAGGGTCAGGCCACTATGCCAATAGAAGTCCAATGAAGCAAAAAATCAATGACCTTGAAATCGATGAAGAATTGAAAGGTCAACTTCTTAACCTAATAAATTTTGAGCCTAAAGCATCTTCAGACTACTACAATTTGGAAGAAGATGAAGTAGGACAAACACTAGAAGTATTTGAAGCCACTAACTCCGACTATACCTATGAGGGAGAACCTCCTAAAGAAGGAATTAGGGCATGCAGAGGAAGCTGTGTCAATGTGTTGACAAATGAGCATAAGCTCTTTCTCTACGATTTTGATCTTAGGCTTCTGTATGGGATGTATAAAGCATCCTCTTCCGGTGGCATGAAACTTGAGCCAAAGGCTTTTAGTGGGGCTTTCCCTACTTAG 6525 42.5 MLRFHVGGKVVERVDLLSKKHWAWRFDLWPFAILYAAWLAVVVPSIDFGDAFIVLGGLAALHVLVLLFTAWSVDFKCFVQYSQVNDIYRADTCKIVPAKFSGSKEIVSLHFRKLLAGSASAVDLEEIYFDFRKQRFIYSKEKETFCKLPYPTKETFGYYLKNTGYGSEPKVVAAVEKWGRNIFEYPQPTFQKLMKEQCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLSELRRVRVDTQTLMVHRCGKWVKLPGTELLPGDVVSIGRDSGQSGEDKSVPADMLILAGSTIVNEAILTGESTPQWKVSITGRGIEEKLSAKRDKSHVLFGGTKILQHTPDKTFPLRTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLVKGLEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDICCFDKTGTLTSDDMEFRGVVGLSDKEDLETDMTSVSLRTVEILASCHALVFVDNKLVGDPLEKAALKGVDWIYKSDEKAIPRKGSGHAVQIVQRHHFASHLKRMAVVVRLQEEFFAFVKGAPETIQERLTDIPSFYVETYKKYTRQGSRVLALAYKSLPDMTVSEARGLDRDTVESDLTFAGFAVFNCPIRADSATVLSELKGSSHDLVMITGDQALTACHVSSQVHITSKQILILNSMKGTEEYEWLSPDESQTVPYREKEVGTLSETYDLCIGGDCIAMLQRTSTVLDVIPYVKVFARVAPEQKELILTTFKTVGRMTLMCGDGTNDVGALKQAHVGIALLNAVPPPQSGNSSSEASKDEAVRSAKSKKSKPSSESSGKALVSGEGSSKSKGGAKLDSAAEQASNRPRTPAEMQRQKLKKLMDELNEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDIQATISGVFTAAFFLFISHARPLPTLSAERPHPHVFCSYVLLSLLGQFAIHLCFLISSVKEAEKHMPDECIEPDSDFHPNLVNTVSYMVSMMLQVATFAVNYMGHPFNQSVSENKPFLYALLAAVGFFTVITSDLFRDLNDWLKLVPLPVGMRDKLLAWALLMFLCCYSWERLLRFMFPGKIPAWQKRQRLVAANLEKKKQVSEGESGKRDGPNVLVFLLRGQERLNMTQRLSFGIQTNASLIMKQDSNMEANSALLECEKEVGISNVQEAGGNVEEFSTEHEGKRKEAGSSAVQEDSIMKEDFPAEQADDMKEAVAEVRNTVEVGKSDEKCIEEGLRKKKIVKVLKVKKKIIKKSPASGVLKRKKAQVEQEDDKKEKVVRVAQEEETQVEQEDDKKEKEVPVAQEVEETLEPQNPTENSKSELKVPIDQEVEETAKPQKPIENSKPESKAKKNNKVLKVKRKIVKKSPANSQKKTNNLQSSPKVQVRKKVENSKSSLQENGEGSEKKVEDTEKPNQKENVKKSISKEEHIEKGEETSNSHKHKFESKNSIKGKVMEKVGSSDKSTKNQNKEEDREKKSQREDKHKENLGGLIFMCSAKTKPDCFNYNVMGVSAGKKDVVLAIKPGLKLFLYDFDLRLLYGIYKASSSGGMKLEPKAFNGAFPAQVRFNIYKDCFPLPESIFKKAIQENYYEKHKFKAELTVKQVRKLSDLFRPIGLHSSSALVRSHAEVPIKNRNVHGEAKDIRVRNSKSKGDARKYHLSSHGRGRHREEAPRHREEVPRDLYLSEKDYRTYGLRSERRNLDPVSRPSLETYSRDHDTDYQLRHLEPRYSDDVSTHAQREIVRADHVYFNGKDYPVYGIDSRHQISPSRAISASGLERNTYDSIYTRQYGLPSIDPYLLPSRREEAAPSTYSRSYLADTEPMRHAAGALSHYTQAHHKEVENDTMPVSSRLKSLPLPLPSASSPSPRLLCTRVDYFNEPDVIYLFQTLGIRIPSQKWSIPLQFCSWVLCRDGQRQQGFNVLDTGNLVLKSKSGMFVWQRFQTGKKGKRKIRCYKCGGSGHYANRSPMKQKINDLEIDEELKGQLLNLINFEPKASSDYYNLEEDEVGQTLEVFEATNSDYTYEGEPPKEGIRACRGSCVNVLTNEHKLFLYDFDLRLLYGMYKASSSGGMKLEPKAFSGAFPT 2174
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 30160639 30195382 - CcPI632755_02g017460.1 Cco02g1746 172503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco02g1746 2174 MobiDBLite consensus disorder prediction 1460 1477 - -
Cco02g1746 2174 ProSitePatterns E1-E2 ATPases phosphorylation site. 490 496 IPR018303 -
Cco02g1746 2174 Gene3D - 485 668 IPR023299 GO:0000166(InterPro)
Cco02g1746 2174 MobiDBLite consensus disorder prediction 1737 1768 - -
Cco02g1746 2174 SUPERFAMILY Calcium ATPase, transduction domain A 256 387 IPR008250 -
Cco02g1746 2174 SUPERFAMILY HAD-like 483 834 IPR036412 -
Cco02g1746 2174 SFLD Haloacid Dehalogenase 469 955 - -
Cco02g1746 2174 SUPERFAMILY Calcium ATPase, transmembrane domain M 167 1169 IPR023298 -
Cco02g1746 2174 MobiDBLite consensus disorder prediction 1414 1444 - -
Cco02g1746 2174 Coils Coil 896 916 - -
Cco02g1746 2174 Coils Coil 1356 1390 - -
Cco02g1746 2174 MobiDBLite consensus disorder prediction 1267 1282 - -
Cco02g1746 2174 FunFam Cation-transporting ATPase 226 388 - -
Cco02g1746 2174 Coils Coil 1558 1578 - -
Cco02g1746 2174 Gene3D - 669 846 IPR023214 -
Cco02g1746 2174 MobiDBLite consensus disorder prediction 1349 1574 - -
Cco02g1746 2174 PRINTS P-type cation-transporting ATPase superfamily signature 690 700 - -
Cco02g1746 2174 PRINTS P-type cation-transporting ATPase superfamily signature 488 502 - -
Cco02g1746 2174 PRINTS P-type cation-transporting ATPase superfamily signature 809 828 - -
Cco02g1746 2174 PRINTS P-type cation-transporting ATPase superfamily signature 308 322 - -
Cco02g1746 2174 ProSitePatterns Hypothetical cof family signature 2. 809 831 - -
Cco02g1746 2174 Pfam Cation transport ATPase (P-type) 540 618 - -
Cco02g1746 2174 NCBIfam ATP13A2 family polyamine export P-type ATPase 42 1149 IPR006544 GO:0016020(InterPro)|GO:0140358(InterPro)
Cco02g1746 2174 Gene3D - 224 388 - -
Cco02g1746 2174 PANTHER CATION-TRANSPORTING ATPASE-RELATED 9 1177 IPR006544 GO:0006874(PANTHER)|GO:0015662(PANTHER)|GO:0016020(InterPro)|GO:0016020(PANTHER)|GO:0019829(PANTHER)|GO:0030176(PANTHER)|GO:0055085(PANTHER)|GO:0140358(InterPro)
Cco02g1746 2174 MobiDBLite consensus disorder prediction 1355 1396 - -
Cco02g1746 2174 MobiDBLite consensus disorder prediction 830 903 - -
Cco02g1746 2174 NCBIfam HAD-IC family P-type ATPase 403 517 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cco02g1746 2174 NCBIfam HAD-IC family P-type ATPase 774 828 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cco02g1746 2174 ProSiteProfiles DCD domain profile. 1577 1704 IPR013989 -
Cco02g1746 2174 Pfam E1-E2 ATPase 257 468 - -
Cco02g1746 2174 CDD P-type_ATPase_cation 170 1107 IPR047820 -
Cco02g1746 2174 SMART dcd 1577 1704 IPR013989 -
Cco02g1746 2174 MobiDBLite consensus disorder prediction 1445 1459 - -
Cco02g1746 2174 MobiDBLite consensus disorder prediction 1267 1290 - -
Cco02g1746 2174 SFLD p-type atpase 469 955 IPR044492 -
Cco02g1746 2174 MobiDBLite consensus disorder prediction 847 861 - -
Cco02g1746 2174 Pfam Development and cell death domain 1580 1702 IPR013989 -
Cco02g1746 2174 Pfam Development and cell death domain 2122 2173 IPR013989 -
Cco02g1746 2174 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 494 678 IPR023299 GO:0000166(InterPro)
Cco02g1746 2174 MobiDBLite consensus disorder prediction 1478 1574 - -
Cco02g1746 2174 FunFam Cation-transporting ATPase 484 668 - -
Cco02g1746 2174 ProSiteProfiles DCD domain profile. 2097 2174 IPR013989 -
Cco02g1746 2174 FunFam Cation-transporting ATPase 669 844 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco02g1746 Cco-Chr2:30160639 Cco09g0812 Cco-Chr9:7539184 8.60E-85 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco02g1746 K14950 - csv:101215828 2293.08