Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco02g1990 ATGCCTATGGCTACTGCACCCTTGAACAAAATTGAGCGAGCCCATCAGATGTACCGTGAAGGGCTTTATGTCGAAGCCCTGAGATTTTACACTGAAGCTCTTGCCATGGCCAAAACCAAGTCCCAGAGGATTGCGCTTCATAGTAACAGAGCTGCTTGCCATTTGAAACTTCATGATTTCAAGAAGGCAGCGGAAGAATGTACATGGGTTCTTGAACTTGATCACAAGCACACTGGAGCTCTAATGCTTCGTGCCCAGACTCTTGTCACACTCAAGGAATACCATTCTGCTCTCTTTGATGTTAACAGACTTATAGAATTGAACCCATCATCAGAAGTTTATCAGAATCTTCACACTCGACTCAAGACGCAATTGTCCCTTGCTCCAATACCTGAATCAGAAGTAGAGCTTGAAGAAGAGGAGGAAGAAGAAGAATGCGCTGTCGAGTTCAGTGCATATGCTGCCAATGAGAAGTGCAATGAGGGAAAAGAAAATGTTGTCGCTCCGAGTATTGCGCAGGTACAGAAACCTGAGCATAATTGCAATTTGATTGAAAAGAACATTATCCAGACTACTCAGGGCAACTGTGGATTATCTGAAGAAGAAAGGGGTAATCAGAAAGTTGAGGTGAAAATGAATACTAAAAGTGAAGTTGTTGCTCCTCAAGCACAAAGCAAGAAGGGCACAACTGACCTAGGTCCCAATGGCTGGCAAACAATCCCAAAACCAAAAGGTCACTCAGCTTTAGACTATGCACGTTGGGATAGAGTTGAGGATGATTCTAGTGAAGATGATGATGACGATGAAGAAGAAGACTCAGGACCTCAATTCCGTTTTCGTGTTAGAACTAAAAATGACACAACGAGCAACTCCGAGCCTCGTGTATTTTGGAAATTCATATGTAAAAAATCAGTACTGTTGAGACCTTCAGACCTATGTGAAGTGTATTTGGTTACATTCAAAACTAGCACTGTGGATCTGATCGACGAGCAAGCTTTGCACATAAGATTTTATACAGAGCTCCAGCTGATGCTGTTTGGTTTGAGTAATCTGTCTGCTGCACAATATCAATTTCCGGGTGGTTATCACAAATGGAGATCCTGTCTTGGATTATGGATAATAGTTCTGTCCAGCAATTACTCGACTCTTCGCAATTGTCCCACAATTCTTTCTCTGCTCTTTAGCCGCTTTATAAAAGGATATGCATATGGAGAATTTATCATCTAG 1227 42.22 MPMATAPLNKIERAHQMYREGLYVEALRFYTEALAMAKTKSQRIALHSNRAACHLKLHDFKKAAEECTWVLELDHKHTGALMLRAQTLVTLKEYHSALFDVNRLIELNPSSEVYQNLHTRLKTQLSLAPIPESEVELEEEEEEEECAVEFSAYAANEKCNEGKENVVAPSIAQVQKPEHNCNLIEKNIIQTTQGNCGLSEEERGNQKVEVKMNTKSEVVAPQAQSKKGTTDLGPNGWQTIPKPKGHSALDYARWDRVEDDSSEDDDDDEEEDSGPQFRFRVRTKNDTTSNSEPRVFWKFICKKSVLLRPSDLCEVYLVTFKTSTVDLIDEQALHIRFYTELQLMLFGLSNLSAAQYQFPGGYHKWRSCLGLWIIVLSSNYSTLRNCPTILSLLFSRFIKGYAYGEFII 408
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 32827622 32834217 - CcPI632755_02g019900.1 Cco02g1990 172747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco02g1990 408 Gene3D Tetratricopeptide repeat domain 9 151 IPR011990 GO:0005515(InterPro)
Cco02g1990 408 SMART tpr_5 44 77 IPR019734 GO:0005515(InterPro)
Cco02g1990 408 SMART tpr_5 78 111 IPR019734 GO:0005515(InterPro)
Cco02g1990 408 SMART tpr_5 7 40 IPR019734 GO:0005515(InterPro)
Cco02g1990 408 SUPERFAMILY TPR-like 11 120 IPR011990 GO:0005515(InterPro)
Cco02g1990 408 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 3 283 - -
Cco02g1990 408 MobiDBLite consensus disorder prediction 217 236 - -
Cco02g1990 408 MobiDBLite consensus disorder prediction 214 290 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco02g1990 - - - 0.0