Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco02g2063 | ATGGCTACCGAGGCGACCGAAGCCACGACCAAGTTCCAGAGTCCGGATTTTCGTCCGGTACCGTCGCCTCCAGATTTCCATCCCGAGATTATGGTCTCAGCTCATGATGGTCTTCGGTTCTGGCAGTTCATGATTGCCGGTTCAATCGCAGGGTCTGTTGAGCATATGGGTATGTTTCCGGTTGATACTGTCAAGACCCATATGCAAGCCCTTGGTTCATGTCCAATTAAATCTGTTGGAGTTCGACAAGCCCTTAGGTCAATTTTGAAATCAGAGGGACCGGCTGGGTTTTATCGTGGTATTGGTGCTATGGGTCTTGGAGCTGGACCTGCGCATGCTGTATATTTTACTGTCTACGAGAATTGTAAGAAGTTTTTCTCCGGTGGGGATCCTAATAATTCTATTGCTCACGCTGCTTCTGGCGTCTGTGCAACGGTGGCCAGTGACGCTGTGTTTACACCGATGGATATGGTTAAACAGAGGCTGCAGCTGAGTAATAATTCCTACAAGGGAGTTTTGGATTGTATCAAAAGGGTCCTTAGAGAGGAGGGTGTTAAAGCATTTTACGCATCATATAGAACTACAGTGTTGATGAATGCTCCATTTACTGCTGTGCATTTTGCTACTTATGAAGCTGCAAAGAGAGGTTTGATGGAGGTTTCGCCAGAGAGTGTAAACGATGAACAGTGGATTGTTCATGCGACGGCAGGAGCTGCTGCTGGAGCCTCAGCTGCACTTGTTACAACGCCGCTTGATGTGGTTAAGACTCAATTACAATGTCAGGGTGTATGTGGATGCGATAGATTCAAAAGCGGGTCAATCAGGGATGTAATTCGGACAATACTCAAGAAGGATGGATATAGAGGGCTTATGAGAGGGTGGGTTCCAAGGATGCTCTTTCATGCTCCGGCTGCAGCTATATGCTGGTCGACATATGAAGCGTTAAAGTCTTTCTTCCACGAGCTCAATGGCAGTGGCAGCGACAACTTGACATGA | 996 | 47.39 | MATEATEATTKFQSPDFRPVPSPPDFHPEIMVSAHDGLRFWQFMIAGSIAGSVEHMGMFPVDTVKTHMQALGSCPIKSVGVRQALRSILKSEGPAGFYRGIGAMGLGAGPAHAVYFTVYENCKKFFSGGDPNNSIAHAASGVCATVASDAVFTPMDMVKQRLQLSNNSYKGVLDCIKRVLREEGVKAFYASYRTTVLMNAPFTAVHFATYEAAKRGLMEVSPESVNDEQWIVHATAGAAAGASAALVTTPLDVVKTQLQCQGVCGCDRFKSGSIRDVIRTILKKDGYRGLMRGWVPRMLFHAPAAAICWSTYEALKSFFHELNGSGSDNLT | 331 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 33574216 | 33577559 | - | CcPI632755_02g020630.1 | Cco02g2063 | 172820 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco02g2063 | 331 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 228 | 318 | IPR018108 | - | |
Cco02g2063 | 331 | Gene3D | Mitochondrial carrier domain | 167 | 331 | IPR023395 | - | |
Cco02g2063 | 331 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 38 | 125 | IPR018108 | - | |
Cco02g2063 | 331 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 132 | 216 | IPR018108 | - | |
Cco02g2063 | 331 | PANTHER | MITOFERRIN-1-RELATED | 33 | 321 | - | GO:0015093(PANTHER)|GO:0031966(PANTHER)|GO:0048250(PANTHER) | |
Cco02g2063 | 331 | Pfam | Mitochondrial carrier protein | 228 | 321 | IPR018108 | - | |
Cco02g2063 | 331 | Pfam | Mitochondrial carrier protein | 38 | 128 | IPR018108 | - | |
Cco02g2063 | 331 | Pfam | Mitochondrial carrier protein | 132 | 219 | IPR018108 | - | |
Cco02g2063 | 331 | Gene3D | Mitochondrial carrier domain | 24 | 166 | IPR023395 | - | |
Cco02g2063 | 331 | PRINTS | Mitochondrial carrier protein signature | 43 | 56 | IPR002067 | GO:0055085(InterPro) | |
Cco02g2063 | 331 | PRINTS | Mitochondrial carrier protein signature | 147 | 165 | IPR002067 | GO:0055085(InterPro) | |
Cco02g2063 | 331 | PRINTS | Mitochondrial carrier protein signature | 189 | 207 | IPR002067 | GO:0055085(InterPro) | |
Cco02g2063 | 331 | PRINTS | Mitochondrial carrier protein signature | 237 | 259 | IPR002067 | GO:0055085(InterPro) | |
Cco02g2063 | 331 | PRINTS | Mitochondrial carrier protein signature | 56 | 70 | IPR002067 | GO:0055085(InterPro) | |
Cco02g2063 | 331 | SUPERFAMILY | Mitochondrial carrier | 36 | 314 | IPR023395 | - | |
Cco02g2063 | 331 | FunFam | Mitochondrial RNA-splicing protein MRS3 | 167 | 329 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco02g2063 | Cco-Chr2:33574216 | Cco04g0860 | Cco-Chr4:24188982 | 1.00E-122 | dispersed | |
Cco02g2063 | Cco-Chr2:33574216 | Cco08g0871 | Cco-Chr8:20555207 | 2.20E-32 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco02g2063 | K15113 | - | csv:101215924 | 637.876 |