Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco02g2079 ATGGCCGCCTGTCCCACCGACTTCACTCGCGACTCCGCCTGTCGCGACGGACGCGCCGCCGGCCACCTCAAACTCATCTCCATCTTCCTCATCTTCATCACCAGCGTCATCGGCGTCTCCTCGCCGGTCCTCCTTACTCGCTTCTTCCACGGCAAACCTGTCTACGACAAAGCCATTCTCATCATCAAATGCTTCGCCGCCGGCGTTATTCTCTCCACCTCCCTCGTCCACGTCCTGCCCGACGCCTTCGACGCCCTCTCCGACTGCCGCGTCGCCTCCCACCATCCCTGGCGGGACTTCCCCTTTTCCGGCCTCATCACCATGGTCGGCGCTCTCGTGGCCCTCCTCGTCGACGTCACAGCCACGTCACACGTCGAACACGGGCAGTATAATCCGGTGGAGGATTCCGGCGGGGAAATTGGGCTTCTGGTGGCGGGGGATTTGAAATCGGAGATGGTGGGAGGCGAGGGAGGAAGGGAAGAGGAATTAGTGAAGATGAAACAGAAATTAGTATCGAAAGTATTGGAAATTGGGATAATATTTCATTCGGTCATAATTGGAGTAACCATGGGAATGTCTCAGAATCAGTGTACGATTAGGCCGCTTGTTGCTGCTCTTGCTTTTCATCAAATCTTTGAAGGAATGGGTCTTGGCGGATGTATTGCTCAGGCAGGATTTAGCTTCACAACGACGTCGTATATGTGTTTTATGTTCTCAGTGACAACGCCGATGGGTATAGTATTAGGGATGGTACTATTTTCAATAACAGGTTATGACGATAACAATCCCAAAGCTTTGATAATGGAAGGTTTATTGGGTTCATTTTCATCTGGGATTCTCATATACATGGCCTTAGTAGATTTAATAGCCGTTGATTTTTTTCACAACAAGATGATGAGCTCAAATCAATGGCTGAAAAAGACTTGTTTTATTGCCTTGTTGCTTGGCTCTGCTTCCATGTCTGTTTTGGCTTTGTGGGCTTGA 984 50.3 MAACPTDFTRDSACRDGRAAGHLKLISIFLIFITSVIGVSSPVLLTRFFHGKPVYDKAILIIKCFAAGVILSTSLVHVLPDAFDALSDCRVASHHPWRDFPFSGLITMVGALVALLVDVTATSHVEHGQYNPVEDSGGEIGLLVAGDLKSEMVGGEGGREEELVKMKQKLVSKVLEIGIIFHSVIIGVTMGMSQNQCTIRPLVAALAFHQIFEGMGLGGCIAQAGFSFTTTSYMCFMFSVTTPMGIVLGMVLFSITGYDDNNPKALIMEGLLGSFSSGILIYMALVDLIAVDFFHNKMMSSNQWLKKTCFIALLLGSASMSVLALWA 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 33696108 33697407 + CcPI632755_02g020790.1 Cco02g2079 172836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco02g2079 327 PANTHER ZINC/IRON TRANSPORTER 21 326 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
Cco02g2079 327 Pfam ZIP Zinc transporter 23 324 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
Cco02g2079 327 NCBIfam ZIP zinc/iron transport family 11 327 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco02g2079 Cco-Chr2:33696108 Cco11g1732 Cco-Chr11:30172907 3.80E-61 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco02g2079 K14709 - csv:101214729 563.918