Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco02g2253 ATGGCGGGAGGTGCCGCCGGAAGGTCCTTGGAAGAGACGCCGACGTGGGCCGTCGCCGCCGTTTGCTTTGTTTTGGTTCTAATTTCTATCATCATCGAACACATTCTCCATCTCATCGGAAAGTGGCTAAAGAAGAAGCATAAACGAGCTCTCAACGAAGCTCTCGAGAAGATCAAATCAGAGCTGATGTTGTTGGGATTCATATCGCTGCTGCTGACGGTGGGACAAAGCTTAATCACCAATGTTTGTATTCCACCGAACGTGGCTGCCACGTGGCATCCATGTAGTCCTCAAAGAGAACAGGAATTAACAAAACAAGCTGACCTTCTTCTCGATTCTTCCGACCATAATCGCCGGAAACTTCTCGCCGTCTCCCATGTCAATGCCACTTTCCGCCGTGCTCTCGCCGCTGCCGGTGGAACCGATAAATGTGCTGCTAAGGGTAAAGTCCCGTTTGTTTCGGAAGGTGGTATTCATCAGCTACATATATTCATCTTCGTGTTGGCTGTTTTCCACGTTTTGTATTGTGTCTTAACTCTAGCGTTGGGCAATGCCAAGATGAGAAGTTGGAAGTCGTGGGAAAAGGAGACCAGAACCGTGGAGTACCAATTTTCACATGATCCAGAACGGTTTCGATTTGCAAGGGACACATCATTCGGGAGAAGACATTTAAGCTTTTGGACCAAATCTCCTTTCCTCGTATGGATTGTTTGTTTCTTCAGACAATTCGTAAGGTCAGTTCCAAAGGTTGATTACTTGACCTTAAGACATGGTTTCGTCATGGCTCATTTGGCACCGCACAGCGATCAAAAATTTGACTTTCAAAAATACATCAAACGCTCTCTTGAAGAAGATTTCAAGGTGGTGGTCAGTATCAGCCCTCCGATCTGGTTCTTCGCTGTTCTCTTCCTACTTTTCAACACCCACGGCTGGAGGGCTTATCTATGGCTACCATTTGTGCCATTAGTTATAGTTTTGTTGGTAGGGACTAAATTGCAAGTGATAATTACGAAAATGGCCCTGAGGATACAAGAAAGAGGGGAAGTGGTGAAGGGAGTGCCAGTGGTAGAGCCAGGGGATGACCTTTTTTGGTTCAATCGCCCTCGTCTCATTCTTTACTTAATCAATTTTGTGCTCTTTCAAAATGCTTTTCAGCTTGCTTTCTTTGCTTGGACTTGGAAAGAATTTGGGATGAAATCTTGTTTCCATGAGCACACAGAGGATTTGGTGATCAGAATAACAATGGGAGTCTTGGTTCAAATCCTTTGCAGTTACGTTACATTGCCTCTTTACGCTCTAGTCACACAGATGGGTTCGACGATGAAGCCCACAATTTTCAATGAAAAAGTAGCGACAGCATTGAGAAACTGGCACCACACAGCTCGCAAACACATCAAGCAAAATCGTGGCTCACTAACGCCAATGTCCAGCCGCCCCACCACCCCCTCCCACCACATGTCGCCGGTCCACCTCCTCCGCCACTACCGAAGCGAATTGGACAGCGTCCATACCTCTCCTAGAAGATCCAATTTCGACAACGACCATTGGGACCCAGATTCCCCCTCTCCTTCCCACCACTTCCACCGTCGCCCCCAAGCCGCCGACGGCTCCGGTTCCTACAGCCACCATCATCGCGATGTAGAGGCCGGTGATGTCGATGTCGTCAATGATTCGACCCGACCCAACCCGACAACCAATTCAAGGGATCCAGATGTTCAACGAACGAATAATAATTCCGAGCAACATGAAATTGATGTGGGACCCAGTGATTTTTCGTTTGATAGAAGAGTTAATAAAGTATGA 1803 47.25 MAGGAAGRSLEETPTWAVAAVCFVLVLISIIIEHILHLIGKWLKKKHKRALNEALEKIKSELMLLGFISLLLTVGQSLITNVCIPPNVAATWHPCSPQREQELTKQADLLLDSSDHNRRKLLAVSHVNATFRRALAAAGGTDKCAAKGKVPFVSEGGIHQLHIFIFVLAVFHVLYCVLTLALGNAKMRSWKSWEKETRTVEYQFSHDPERFRFARDTSFGRRHLSFWTKSPFLVWIVCFFRQFVRSVPKVDYLTLRHGFVMAHLAPHSDQKFDFQKYIKRSLEEDFKVVVSISPPIWFFAVLFLLFNTHGWRAYLWLPFVPLVIVLLVGTKLQVIITKMALRIQERGEVVKGVPVVEPGDDLFWFNRPRLILYLINFVLFQNAFQLAFFAWTWKEFGMKSCFHEHTEDLVIRITMGVLVQILCSYVTLPLYALVTQMGSTMKPTIFNEKVATALRNWHHTARKHIKQNRGSLTPMSSRPTTPSHHMSPVHLLRHYRSELDSVHTSPRRSNFDNDHWDPDSPSPSHHFHRRPQAADGSGSYSHHHRDVEAGDVDVVNDSTRPNPTTNSRDPDVQRTNNNSEQHEIDVGPSDFSFDRRVNKV 600
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 35108370 35114887 + CcPI632755_02g022530.1 Cco02g2253 173010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco02g2253 600 MobiDBLite consensus disorder prediction 557 585 - -
Cco02g2253 600 MobiDBLite consensus disorder prediction 500 600 - -
Cco02g2253 600 MobiDBLite consensus disorder prediction 500 532 - -
Cco02g2253 600 MobiDBLite consensus disorder prediction 539 553 - -
Cco02g2253 600 MobiDBLite consensus disorder prediction 463 486 - -
Cco02g2253 600 Pfam Mlo family 7 495 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Cco02g2253 600 PANTHER MLO-LIKE PROTEIN 1 2 533 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Cco02g2253 600 MobiDBLite consensus disorder prediction 467 484 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco02g2253 Cco-Chr2:35108370 Cco05g2351 Cco-Chr5:32027397 1.10E-191 dispersed
Cco02g0029 Cco-Chr2:374512 Cco02g2253 Cco-Chr2:35108370 3.10E-63 transposed
Cco02g1112 Cco-Chr2:15975091 Cco02g2253 Cco-Chr2:35108370 1.70E-114 transposed
Cco04g2118 Cco-Chr4:35035853 Cco02g2253 Cco-Chr2:35108370 8.30E-122 transposed
Cco06g0054 Cco-Chr6:519452 Cco02g2253 Cco-Chr2:35108370 1.80E-105 transposed
Cco02g2253 Cco-Chr2:35108370 Cco03g0237 Cco-Chr3:2541930 1.80E-255 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco02g2253 K08472 - csv:101212018 1074.69