Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco02g2271 ATGAAAGAAGCAGAGAAAAATTTAGATCCTCAACTATGGCATGCCTGTGCAGGAGGCATGGTCCAGATGCCTGCGATTAACTCCAAGGTTTTCTACTTCCCTCAGGGTCACGCCGAGCACGCTCAGGCCACCGTCGATTTCACCTCTTCACTCAGAATCCCGCCGCTTATTCCTTGTCGAGTGCTCGCCGTTAAGTTCTTGGCTGACCATGAAACGGATGAGGTTTTCGCGAATATAAGAATGGTTCCACTGGCGAATAACGACCTCAATTTCGAAGAGGGGGGTTTTGGGAGTAATGGGTCTGAGAATAATATGGAGAAACCGGCTTCTTTCGCCAAGACGTTGACTCAATCCGATGCCAACAACGGCGGTGGATTCTCGGTTCCGAGGTACTGTGCGGAGACGATATTTCCGCGGCTGGATTACACGGCGGATCCGCCGGTTCAGACGGTGATTGCCAAGGACGTTCACGGCGAGGTTTGGAAGTTCCGCCATATTTACAGGGGGACGCCTCGCCGGCATTTGTTGACTACTGGGTGGAGTACTTTTGTGAATCAGAAGAAGCTCGTCGCCGGCGACTCGATTGTTTTTCTGAGATCCAAAAATGGCGACCTCTGCGTCGGAATCCGGCGAGCCAAAAGGGCAATTGGGTGTGCCGCCGATCACCCGTACGGATGGAATCCCGGCGGTGGAAGTTGCATCCCACCTTATGGTGGATTGACGATGTTTTTAAGAGATGAGGACAACAAGTTGAGTAGAAAAGGGTCTTTGAGTTCCAGTGGTGGTAGTGGGAACTTGAGGGGAAAAGGTAAAGTGAGGCCGGAATCAGTGATGGAAGCGGCGGCGCTTGCGGCGAGTGGACAGCCGTTTGAGGTGGTTTATTACCCACGTGCCAGCACGCCGGAGTTCTGTGTGAAAGTCTCATCGGTTCGAGCCGCCATGAGGATCCAATGGTGCTCTGGTATGAGGTTCAAGATGCCATTTGAGACTGAGGATTCTTCTCGGATTAGTTGGTTTATGGGCACCATTTCTTCTGTTCAAGTTGCTGATCCTATCCGTTGGCCTAATTCTCCATGGCGGCTTCTTCAGGTATTCTCCTCCTCCTCCTCCTCCTCCTTCTCTTTGTTTCATTCACTTTCCTCTGCAATTTCTTCTGCACCGGACACTATCATTAAAGTGACATGGGATGAACCAGATTTGCTACAGAATGTGAAGCGTGTTAGCCCGTGGTTAGTTGAACTGGTATCGAACATGCCCGTCATTCAACTATCACCGTTTTCTCCACCGAGAAAGAAGTTTCGACTACCACAACACCCAGACTTTCCCCTCGACACTGAATTCCCACTGTCGTCATTTTCGAGCAATACCCTTAGGCCAAGCAGTCCCATGTGTTGTTTATCTGATAACACTTCTGTAGGCATACAGGGAGCCAGGCATACTCAATTTGGAATATCTTTATCGGATTTCCATCTCAACAAACTGCAATTAGGGCTGGTTCCATCCAGTTTTCAGCAGCTTGATTTTCAGTCTAGGATTTCCAATAGATCAGTTACAGACCACAGAGACAGCAGCAGTCAGAACTCATCGGCGTTGCTAAACGGGGAAAAGACTGGTCCGAAGTTGGAAAGATCCGATTCGGTGAAGAAGCATCAGTTTTTACTCTTTGGTCAACCTATACTCACTGAACAGCAAATCACTTGCAGCTCTTCTGGTGACATTCGTTCACCTCAAACAGACAAAGGCTCCTTGGATGTGAATCTGGAGAGAGTGAAGTTTCTTTCCGATGGCACAGGATCCACTTTCAAGCAGCAAATTTCTCCAAACAAGTCACCAGGAGTAGGATTTCCATGGTACCAAGGTTATCAAGCCACTGAACTCGGCCTAGACATCGGTCACTGCAAGGTATTTATGGAGTCAGAAGATGTGGGCCGGACACTCAACCTTTCAGTAATCGGCTCATATGAAGAACTATACAGGAGGCTCGCGAATATGTTCGGAATGGAAAAACCAGACATTCTTAGCCATGTACTGTACCAAGATGCAACAGGTGCTGTAAAACAAGCTGGAGATAAACCATTCAGTGATTTCATCAAAACAGCTAGAAGACTGACGATACTAACGGACTCGGGTTCGGACAAGCTGGGAAGGACAATGATGGATGGAATGAGAAGTGGTGAAAATGGATTAGATGCTTCAAACAAGACTGGCCCCTTGAGCATATTTGCCTAG 2229 48.45 MKEAEKNLDPQLWHACAGGMVQMPAINSKVFYFPQGHAEHAQATVDFTSSLRIPPLIPCRVLAVKFLADHETDEVFANIRMVPLANNDLNFEEGGFGSNGSENNMEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVIAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRSKNGDLCVGIRRAKRAIGCAADHPYGWNPGGGSCIPPYGGLTMFLRDEDNKLSRKGSLSSSGGSGNLRGKGKVRPESVMEAAALAASGQPFEVVYYPRASTPEFCVKVSSVRAAMRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPIRWPNSPWRLLQVFSSSSSSSFSLFHSLSSAISSAPDTIIKVTWDEPDLLQNVKRVSPWLVELVSNMPVIQLSPFSPPRKKFRLPQHPDFPLDTEFPLSSFSSNTLRPSSPMCCLSDNTSVGIQGARHTQFGISLSDFHLNKLQLGLVPSSFQQLDFQSRISNRSVTDHRDSSSQNSSALLNGEKTGPKLERSDSVKKHQFLLFGQPILTEQQITCSSSGDIRSPQTDKGSLDVNLERVKFLSDGTGSTFKQQISPNKSPGVGFPWYQGYQATELGLDIGHCKVFMESEDVGRTLNLSVIGSYEELYRRLANMFGMEKPDILSHVLYQDATGAVKQAGDKPFSDFIKTARRLTILTDSGSDKLGRTMMDGMRSGENGLDASNKTGPLSIFA 742
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 35254091 35257018 - CcPI632755_02g022710.1 Cco02g2271 173028

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cco02g2271 742 ProSiteProfiles PB1 domain profile. 630 710 IPR053793 -
Cco02g2271 742 Pfam B3 DNA binding domain 111 212 IPR003340 GO:0003677(InterPro)
Cco02g2271 742 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 7 714 IPR044835 GO:0003677(InterPro)|GO:0006355(InterPro)|GO:0009725(InterPro)
Cco02g2271 742 FunFam Auxin response factor 109 213 - -
Cco02g2271 742 MobiDBLite consensus disorder prediction 251 271 - -
Cco02g2271 742 CDD B3_DNA 110 211 IPR003340 GO:0003677(InterPro)
Cco02g2271 742 Pfam Auxin response factor 280 363 IPR010525 GO:0003677(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro)|GO:0009725(InterPro)
Cco02g2271 742 MobiDBLite consensus disorder prediction 514 534 - -
Cco02g2271 742 Gene3D - 630 715 - -
Cco02g2271 742 SUPERFAMILY DNA-binding pseudobarrel domain 106 215 IPR015300 -
Cco02g2271 742 Gene3D - 381 420 - -
Cco02g2271 742 Gene3D - 317 375 - -
Cco02g2271 742 Gene3D - 109 213 IPR015300 -
Cco02g2271 742 ProSiteProfiles B3 DNA-binding domain profile. 111 213 IPR003340 GO:0003677(InterPro)
Cco02g2271 742 SMART B3_2 111 213 IPR003340 GO:0003677(InterPro)
Cco02g2271 742 MobiDBLite consensus disorder prediction 514 543 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco02g2271 K14486 - - csv:101216500 1338.17
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco02g2271 Cco-Chr2:35254091 Cco08g0894 Cco-Chr8:20796660 5.00E-202 dispersed
Cco02g2271 Cco-Chr2:35254091 Cco04g1106 Cco-Chr4:26496418 9.90E-259 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi6g258 . . Bda02g00757 . . . . . . . . . . . . Cpe05g00816 . . . . . . . . Cla02g02068 Cam02g2191 Cec02g2231 Cco02g2271 Clacu02g2176 Cmu02g2113 Cre02g2429 Cone1ag0736 Cone5ag1237 . . . Csa06g01198 Chy11g00813 Cme11g01803 Blo13g01118 Blo14g00180 . . . . . Bma11g00175 Sed14g0406 Cmo02g00900 Cmo20g00525 Cma02g00897 Cma20g00489 Car02g00643 Car20g00432 . . Bhi10g00538 Tan05g0245 Cmetu03g0635 . . . . . . . . . . . . . . .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cco09g0909 . 29 711 B3 DNA Binding Superfamily AT3G24650 50.2 5.0e-114 409.1
Cco01g0865 . 68 277 B3 DNA Binding Superfamily AT3G26790 56.6 3.8e-66 248.8
Cco04g2093 . 169 324 B3 DNA Binding Superfamily AT1G28300 58.6 2.7e-39 159.8
Cco05g2568 . 1 348 B3 DNA Binding Superfamily AT1G25560 59.2 1.6e-108 389.8
Cco03g1000 . 34 311 B3 DNA Binding Superfamily AT1G25560 63.9 2.7e-92 335.9
Cco10g1857 . 41 155 B3 DNA Binding Superfamily AT1G25560 65.2 3.5e-39 159.5
Cco06g0234 . 70 199 B3 DNA Binding Superfamily AT1G25560 57.6 3.2e-37 152.9
Cco01g0128 . 52 160 B3 DNA Binding Superfamily AT1G25560 66.1 4.2e-37 152.5
Cco01g0128 . 51 165 B3 DNA Binding Superfamily AT1G01030 82.8 3.0e-53 206.1
Cco05g2568 . 183 306 B3 DNA Binding Superfamily AT1G01030 62.2 7.9e-38 154.8
Cco04g1106 . 14 696 B3 DNA Binding Superfamily AT4G30080 59.7 5.9e-218 754.2
Cco02g2271 . 4 714 B3 DNA Binding Superfamily AT4G30080 55.2 2.9e-209 725.3
Cco08g0894 . 5 688 B3 DNA Binding Superfamily AT4G30080 54.7 1.8e-198 689.5
Cco03g0008 . 4 736 B3 DNA Binding Superfamily AT2G30470 51.9 5.5e-199 691.4
Cco09g1977 . 56 420 B3 DNA Binding Superfamily AT3G18990 57.8 7.0e-104 374.4
Cco11g0036 . 5 676 B3 DNA Binding Superfamily AT1G59750 68.2 3.7e-249 857.8
Cco09g0944 . 14 676 B3 DNA Binding Superfamily AT1G59750 51.1 1.0e-169 594.0
Cco04g2271 . 92 452 B3 DNA Binding Superfamily AT1G59750 55.6 1.4e-107 387.5
Cco11g1173 . 20 401 B3 DNA Binding Superfamily AT1G59750 51.9 1.4e-107 387.5
Cco03g0798 . 23 396 B3 DNA Binding Superfamily AT1G59750 53.2 3.0e-105 379.8
Cco11g0155 . 23 380 B3 DNA Binding Superfamily AT1G59750 53.4 2.8e-103 373.2
Cco05g2092 . 42 379 B3 DNA Binding Superfamily AT1G59750 52.2 1.6e-98 357.5
Cco02g2271 . 3 714 B3 DNA Binding Superfamily AT2G28350 55.8 9.1e-203 703.7
Cco04g1106 . 13 696 B3 DNA Binding Superfamily AT2G28350 55.3 2.7e-199 692.2
Cco08g0894 . 13 693 B3 DNA Binding Superfamily AT2G28350 51.3 2.7e-175 612.5
Cco09g0944 . 14 691 B3 DNA Binding Superfamily AT2G46530 56.2 4.1e-189 658.3
Cco07g1226 . 18 694 B3 DNA Binding Superfamily AT2G46530 53.1 2.1e-177 619.4
Cco11g0036 . 13 666 B3 DNA Binding Superfamily AT2G46530 50.8 5.0e-163 571.6
Cco04g2271 . 70 437 B3 DNA Binding Superfamily AT2G46530 51.9 1.5e-98 357.5
Cco03g0798 . 1 368 B3 DNA Binding Superfamily AT2G46530 50.4 1.2e-95 347.8
Cco11g1173 . 21 376 B3 DNA Binding Superfamily AT2G46530 50.4 3.3e-90 329.7
Cco04g1106 . 14 696 B3 DNA Binding Superfamily AT4G30080 59.7 5.9e-218 754.2
Cco02g2271 . 4 714 B3 DNA Binding Superfamily AT4G30080 55.2 2.9e-209 725.3
Cco08g0894 . 5 688 B3 DNA Binding Superfamily AT4G30080 54.7 1.8e-198 689.5
Cco09g0944 . 50 678 B3 DNA Binding Superfamily AT3G61830 54.4 3.9e-175 611.7
Cco07g1226 . 54 671 B3 DNA Binding Superfamily AT3G61830 51.9 6.0e-160 561.2
Cco11g0036 . 53 647 B3 DNA Binding Superfamily AT3G61830 51.8 1.7e-154 543.1
Cco04g2271 . 120 433 B3 DNA Binding Superfamily AT3G61830 53.5 1.5e-86 317.4
Cco03g0798 . 51 364 B3 DNA Binding Superfamily AT3G61830 51.7 1.2e-83 307.8
Cco11g0155 . 1 1088 B3 DNA Binding Superfamily AT1G19220 63.4 0.0e+00 1166.0
Cco06g2035 . 41 396 B3 DNA Binding Superfamily AT1G19220 52.5 1.9e-104 377.9
Cco11g0036 . 26 387 B3 DNA Binding Superfamily AT1G19220 51.0 9.8e-98 355.5
Cco04g2119 . 46 379 B3 DNA Binding Superfamily AT1G19220 50.1 2.6e-90 330.9
Cco09g0944 . 20 224 B3 DNA Binding Superfamily AT1G43950 56.1 3.7e-60 228.4
Cco07g1226 . 24 228 B3 DNA Binding Superfamily AT1G43950 56.8 2.4e-59 225.7
Cco11g0036 . 19 227 B3 DNA Binding Superfamily AT1G43950 51.2 6.6e-57 217.6
Cco06g2035 . 41 246 B3 DNA Binding Superfamily AT1G43950 51.9 1.6e-55 213.0
Cco04g2119 . 149 434 B3 DNA Binding Superfamily AT2G33860 67.2 8.0e-110 394.4
Cco02g2251 . 199 482 B3 DNA Binding Superfamily AT2G33860 57.0 3.1e-90 329.3
Cco06g2035 . 147 436 B3 DNA Binding Superfamily AT2G33860 51.0 2.0e-76 283.5
Cco04g2271 . 196 427 B3 DNA Binding Superfamily AT2G33860 56.5 2.1e-70 263.5
Cco03g0798 . 127 358 B3 DNA Binding Superfamily AT2G33860 56.5 2.8e-70 263.1
Cco11g0155 . 126 356 B3 DNA Binding Superfamily AT2G33860 54.5 6.8e-69 258.5
Cco11g1173 . 134 365 B3 DNA Binding Superfamily AT2G33860 54.7 1.2e-68 257.7
Cco07g1226 . 129 356 B3 DNA Binding Superfamily AT2G33860 51.9 3.4e-68 256.1
Cco05g2092 . 149 407 B3 DNA Binding Superfamily AT2G33860 53.5 5.8e-68 255.4
Cco09g0944 . 125 352 B3 DNA Binding Superfamily AT2G33860 52.4 2.4e-66 250.0
Cco02g2251 . 78 833 B3 DNA Binding Superfamily AT5G60450 60.4 5.1e-250 860.9
Cco04g2119 . 41 503 B3 DNA Binding Superfamily AT5G60450 51.7 1.4e-122 437.6
Cco03g0798 . 7 377 B3 DNA Binding Superfamily AT5G60450 50.4 1.6e-102 370.9
Cco11g0155 . 14 374 B3 DNA Binding Superfamily AT5G60450 50.1 8.2e-99 358.6
Cco05g2092 . 8 939 B3 DNA Binding Superfamily AT1G19850 60.6 3.3e-293 1004.6
Cco11g0036 . 16 357 B3 DNA Binding Superfamily AT1G19850 52.5 1.2e-98 358.2
Cco09g0944 . 10 351 B3 DNA Binding Superfamily AT1G19850 50.3 2.2e-95 347.4
Cco07g1226 . 24 355 B3 DNA Binding Superfamily AT1G19850 51.3 1.2e-93 341.7
Cco04g2271 . 70 972 B3 DNA Binding Superfamily AT1G30330 69.0 0.0e+00 1200.7
Cco03g0798 . 1 898 B3 DNA Binding Superfamily AT1G30330 70.2 0.0e+00 1166.0
Cco01g0869 . 29 992 B3 DNA Binding Superfamily AT1G30330 52.4 4.9e-247 851.3
Cco11g0036 . 23 383 B3 DNA Binding Superfamily AT1G30330 54.0 3.0e-103 373.6
Cco06g2035 . 41 395 B3 DNA Binding Superfamily AT1G30330 52.8 1.3e-101 368.2
Cco07g1226 . 24 379 B3 DNA Binding Superfamily AT1G30330 52.2 1.8e-100 364.4
Cco09g0944 . 7 352 B3 DNA Binding Superfamily AT1G30330 53.8 3.1e-100 363.6
Cco11g0155 . 1 1085 B3 DNA Binding Superfamily AT5G20730 56.8 0.0e+00 1090.1
Cco03g0798 . 4 471 B3 DNA Binding Superfamily AT5G20730 59.2 1.1e-150 531.6
Cco04g2271 . 73 537 B3 DNA Binding Superfamily AT5G20730 59.1 9.0e-150 528.5
Cco06g2035 . 41 393 B3 DNA Binding Superfamily AT5G20730 52.0 3.1e-102 370.5
Cco11g0036 . 6 360 B3 DNA Binding Superfamily AT5G20730 51.5 1.5e-96 351.7
Cco01g0869 . 126 961 B3 DNA Binding Superfamily AT5G37020 55.9 1.8e-236 815.8
Cco04g2271 . 166 934 B3 DNA Binding Superfamily AT5G37020 53.7 1.6e-200 696.4
Cco03g0798 . 97 861 B3 DNA Binding Superfamily AT5G37020 52.9 9.8e-187 650.6
Cco11g0155 . 96 420 B3 DNA Binding Superfamily AT5G37020 62.4 3.0e-111 399.8
Cco11g1173 . 104 461 B3 DNA Binding Superfamily AT5G37020 59.1 6.3e-109 392.1
Cco11g0036 . 101 376 B3 DNA Binding Superfamily AT5G37020 53.4 1.1e-76 285.0
Cco07g1226 . 1 697 B3 DNA Binding Superfamily AT4G23980 56.1 1.1e-202 703.4
Cco09g0944 . 17 676 B3 DNA Binding Superfamily AT4G23980 57.4 1.2e-196 683.3
Cco01g0179 . 94 842 B3 DNA Binding Superfamily AT4G23980 50.7 4.8e-185 644.8
Cco11g0036 . 16 647 B3 DNA Binding Superfamily AT4G23980 53.1 4.8e-169 591.7
Cco11g1173 . 17 385 B3 DNA Binding Superfamily AT4G23980 50.3 2.0e-98 357.1
Cco05g2092 . 46 379 B3 DNA Binding Superfamily AT4G23980 52.4 4.9e-97 352.4
Cco06g2035 . 1 821 B3 DNA Binding Superfamily AT5G62000 60.8 4.6e-284 974.2
Cco11g1173 . 8 404 B3 DNA Binding Superfamily AT5G62000 51.2 2.0e-109 394.0
Cco11g0155 . 23 381 B3 DNA Binding Superfamily AT5G62000 53.3 3.5e-106 383.3
Cco09g0909 . 29 711 B3 DNA Binding Superfamily AT3G24650 50.2 5.0e-114 409.1
Cco04g2093 . 169 324 B3 DNA Binding Superfamily AT1G28300 58.6 2.7e-39 159.8
Cco01g0865 . 68 277 B3 DNA Binding Superfamily AT3G26790 56.6 3.8e-66 248.8
Cco03g0008 . 4 736 B3 DNA Binding Superfamily AT2G30470 51.9 5.5e-199 691.4
Cco11g0155 . 1 1088 B3 DNA Binding Superfamily AT1G19220 63.4 0.0e+00 1166.0
Cco06g2035 . 41 396 B3 DNA Binding Superfamily AT1G19220 52.5 1.9e-104 377.9
Cco11g0036 . 26 387 B3 DNA Binding Superfamily AT1G19220 51.0 9.8e-98 355.5
Cco04g2119 . 46 379 B3 DNA Binding Superfamily AT1G19220 50.1 2.6e-90 330.9
Cco05g2092 . 8 939 B3 DNA Binding Superfamily AT1G19850 60.6 3.3e-293 1004.6
Cco11g0036 . 16 357 B3 DNA Binding Superfamily AT1G19850 52.5 1.2e-98 358.2
Cco09g0944 . 10 351 B3 DNA Binding Superfamily AT1G19850 50.3 2.2e-95 347.4
Cco07g1226 . 24 355 B3 DNA Binding Superfamily AT1G19850 51.3 1.2e-93 341.7
Cco04g2271 . 70 972 B3 DNA Binding Superfamily AT1G30330 69.0 0.0e+00 1200.7
Cco03g0798 . 1 898 B3 DNA Binding Superfamily AT1G30330 70.2 0.0e+00 1166.0
Cco01g0869 . 29 992 B3 DNA Binding Superfamily AT1G30330 52.4 4.9e-247 851.3
Cco11g0036 . 23 383 B3 DNA Binding Superfamily AT1G30330 54.0 3.0e-103 373.6
Cco06g2035 . 41 395 B3 DNA Binding Superfamily AT1G30330 52.8 1.3e-101 368.2
Cco07g1226 . 24 379 B3 DNA Binding Superfamily AT1G30330 52.2 1.8e-100 364.4
Cco09g0944 . 7 352 B3 DNA Binding Superfamily AT1G30330 53.8 3.1e-100 363.6
Cco11g0155 . 1 1085 B3 DNA Binding Superfamily AT5G20730 56.8 0.0e+00 1090.1
Cco03g0798 . 4 471 B3 DNA Binding Superfamily AT5G20730 59.2 1.1e-150 531.6
Cco04g2271 . 73 537 B3 DNA Binding Superfamily AT5G20730 59.1 9.0e-150 528.5
Cco06g2035 . 41 393 B3 DNA Binding Superfamily AT5G20730 52.0 3.1e-102 370.5
Cco11g0036 . 6 360 B3 DNA Binding Superfamily AT5G20730 51.5 1.5e-96 351.7
Cco01g0869 . 126 961 B3 DNA Binding Superfamily AT5G37020 55.9 1.8e-236 815.8
Cco04g2271 . 166 934 B3 DNA Binding Superfamily AT5G37020 53.7 1.6e-200 696.4
Cco03g0798 . 97 861 B3 DNA Binding Superfamily AT5G37020 52.9 9.8e-187 650.6
Cco11g0155 . 96 420 B3 DNA Binding Superfamily AT5G37020 62.4 3.0e-111 399.8
Cco11g1173 . 104 461 B3 DNA Binding Superfamily AT5G37020 59.1 6.3e-109 392.1
Cco11g0036 . 101 376 B3 DNA Binding Superfamily AT5G37020 53.4 1.1e-76 285.0
Cco04g2119 . 149 434 B3 DNA Binding Superfamily AT2G33860 67.2 8.0e-110 394.4
Cco02g2251 . 199 482 B3 DNA Binding Superfamily AT2G33860 57.0 3.1e-90 329.3
Cco06g2035 . 147 436 B3 DNA Binding Superfamily AT2G33860 51.0 2.0e-76 283.5
Cco04g2271 . 196 427 B3 DNA Binding Superfamily AT2G33860 56.5 2.1e-70 263.5
Cco03g0798 . 127 358 B3 DNA Binding Superfamily AT2G33860 56.5 2.8e-70 263.1
Cco11g0155 . 126 356 B3 DNA Binding Superfamily AT2G33860 54.5 6.8e-69 258.5
Cco11g1173 . 134 365 B3 DNA Binding Superfamily AT2G33860 54.7 1.2e-68 257.7
Cco07g1226 . 129 356 B3 DNA Binding Superfamily AT2G33860 51.9 3.4e-68 256.1
Cco05g2092 . 149 407 B3 DNA Binding Superfamily AT2G33860 53.5 5.8e-68 255.4
Cco09g0944 . 125 352 B3 DNA Binding Superfamily AT2G33860 52.4 2.4e-66 250.0
Cco02g2251 . 78 833 B3 DNA Binding Superfamily AT5G60450 60.4 5.1e-250 860.9
Cco04g2119 . 41 503 B3 DNA Binding Superfamily AT5G60450 51.7 1.4e-122 437.6
Cco03g0798 . 7 377 B3 DNA Binding Superfamily AT5G60450 50.4 1.6e-102 370.9
Cco11g0155 . 14 374 B3 DNA Binding Superfamily AT5G60450 50.1 8.2e-99 358.6
Cco11g0036 . 5 676 B3 DNA Binding Superfamily AT1G59750 68.2 3.7e-249 857.8
Cco09g0944 . 14 676 B3 DNA Binding Superfamily AT1G59750 51.1 1.0e-169 594.0
Cco04g2271 . 92 452 B3 DNA Binding Superfamily AT1G59750 55.6 1.4e-107 387.5
Cco11g1173 . 20 401 B3 DNA Binding Superfamily AT1G59750 51.9 1.4e-107 387.5
Cco03g0798 . 23 396 B3 DNA Binding Superfamily AT1G59750 53.2 3.0e-105 379.8
Cco11g0155 . 23 380 B3 DNA Binding Superfamily AT1G59750 53.4 2.8e-103 373.2
Cco05g2092 . 42 379 B3 DNA Binding Superfamily AT1G59750 52.2 1.6e-98 357.5
Cco06g2035 . 1 821 B3 DNA Binding Superfamily AT5G62000 60.8 4.6e-284 974.2
Cco11g1173 . 8 404 B3 DNA Binding Superfamily AT5G62000 51.2 2.0e-109 394.0
Cco11g0155 . 23 381 B3 DNA Binding Superfamily AT5G62000 53.3 3.5e-106 383.3
Cco09g0944 . 14 691 B3 DNA Binding Superfamily AT2G46530 56.2 4.1e-189 658.3
Cco07g1226 . 18 694 B3 DNA Binding Superfamily AT2G46530 53.1 2.1e-177 619.4
Cco11g0036 . 13 666 B3 DNA Binding Superfamily AT2G46530 50.8 5.0e-163 571.6
Cco04g2271 . 70 437 B3 DNA Binding Superfamily AT2G46530 51.9 1.5e-98 357.5
Cco03g0798 . 1 368 B3 DNA Binding Superfamily AT2G46530 50.4 1.2e-95 347.8
Cco11g1173 . 21 376 B3 DNA Binding Superfamily AT2G46530 50.4 3.3e-90 329.7
Cco09g0944 . 50 678 B3 DNA Binding Superfamily AT3G61830 54.4 3.9e-175 611.7
Cco07g1226 . 54 671 B3 DNA Binding Superfamily AT3G61830 51.9 6.0e-160 561.2
Cco11g0036 . 53 647 B3 DNA Binding Superfamily AT3G61830 51.8 1.7e-154 543.1
Cco04g2271 . 120 433 B3 DNA Binding Superfamily AT3G61830 53.5 1.5e-86 317.4
Cco03g0798 . 51 364 B3 DNA Binding Superfamily AT3G61830 51.7 1.2e-83 307.8
Cco07g1226 . 1 697 B3 DNA Binding Superfamily AT4G23980 56.1 1.1e-202 703.4
Cco09g0944 . 17 676 B3 DNA Binding Superfamily AT4G23980 57.4 1.2e-196 683.3
Cco01g0179 . 94 842 B3 DNA Binding Superfamily AT4G23980 50.7 4.8e-185 644.8
Cco11g0036 . 16 647 B3 DNA Binding Superfamily AT4G23980 53.1 4.8e-169 591.7
Cco11g1173 . 17 385 B3 DNA Binding Superfamily AT4G23980 50.3 2.0e-98 357.1
Cco05g2092 . 46 379 B3 DNA Binding Superfamily AT4G23980 52.4 4.9e-97 352.4
Cco09g0944 . 20 224 B3 DNA Binding Superfamily AT1G43950 56.1 3.7e-60 228.4
Cco07g1226 . 24 228 B3 DNA Binding Superfamily AT1G43950 56.8 2.4e-59 225.7
Cco11g0036 . 19 227 B3 DNA Binding Superfamily AT1G43950 51.2 6.6e-57 217.6
Cco06g2035 . 41 246 B3 DNA Binding Superfamily AT1G43950 51.9 1.6e-55 213.0
Cco02g2271 . 3 714 B3 DNA Binding Superfamily AT2G28350 55.8 9.1e-203 703.7
Cco04g1106 . 13 696 B3 DNA Binding Superfamily AT2G28350 55.3 2.7e-199 692.2
Cco08g0894 . 13 693 B3 DNA Binding Superfamily AT2G28350 51.3 2.7e-175 612.5
Cco04g1106 . 14 696 B3 DNA Binding Superfamily AT4G30080 59.7 5.9e-218 754.2
Cco02g2271 . 4 714 B3 DNA Binding Superfamily AT4G30080 55.2 2.9e-209 725.3
Cco08g0894 . 5 688 B3 DNA Binding Superfamily AT4G30080 54.7 1.8e-198 689.5
Cco01g0128 . 51 165 B3 DNA Binding Superfamily AT1G01030 82.8 3.0e-53 206.1
Cco05g2568 . 183 306 B3 DNA Binding Superfamily AT1G01030 62.2 7.9e-38 154.8
Cco05g2568 . 1 348 B3 DNA Binding Superfamily AT1G25560 59.2 1.6e-108 389.8
Cco03g1000 . 34 311 B3 DNA Binding Superfamily AT1G25560 63.9 2.7e-92 335.9
Cco10g1857 . 41 155 B3 DNA Binding Superfamily AT1G25560 65.2 3.5e-39 159.5
Cco06g0234 . 70 199 B3 DNA Binding Superfamily AT1G25560 57.6 3.2e-37 152.9
Cco01g0128 . 52 160 B3 DNA Binding Superfamily AT1G25560 66.1 4.2e-37 152.5
Cco02g0638 . 45 276 B3 DNA Binding Superfamily AT3G19184 62.2 1.6e-68 256.5
Cco08g1758 . 6 227 B3 DNA Binding Superfamily AT3G19184 54.6 3.7e-52 202.2
Cco08g1757 . 405 628 B3 DNA Binding Superfamily AT3G19184 51.3 7.9e-47 184.5
Cco08g1758 . 51 228 B3 DNA Binding Superfamily AT5G42700 58.9 6.3e-53 204.1
Cco08g1757 . 452 630 B3 DNA Binding Superfamily AT5G42700 52.5 4.8e-45 177.9
Cco02g0638 . 95 261 B3 DNA Binding Superfamily AT5G42700 56.8 6.3e-45 177.6
Cco09g1977 . 56 420 B3 DNA Binding Superfamily AT3G18990 57.8 7.0e-104 374.4
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001024 3 6 3 3 2 2 2 2 2 3 2 2 5 2 2 4 2 6 4 2 2 2 2 2 2 2 2 2 5 3 83
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58851 PF02362 B3 1.50E-21 CL0405 Cco TF