Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco02g2353 ATGGGGGCGTTCCAAATGCAGCTTGGAATTGACGCAAATCTTGTAAAGCCACTTTGTCATCTCTGCCTTGCTTCATCTCTGAATCCTTCGCCATCGCTTGTTTTTCAACCTATAAAGTACCCCCGTCTTCAGAAATTCAAGCCTTCTCGAAGTTCCCGTCGAACCCATTTCGCAACGCCATCGACATCTTTCACCGTAGCTTCTTCCATGGCCGATTCTTCTCTTTCCAGAACCTCTGAGACAGAGACGAAACCTTTCTCTGTGCTTTTCGTTTGCTTGGGTAACATTTGTAGAAGCCCAGCTGGTGAAGGAGTGTTCAGGAACTTGGTGACGAAGAAGGGTCTCGATTCAAAATTCTTTATCGATTCTGCTGGCACCATCGGTTATCACGAGGGTAATGAGGCCGACCCAAGAATGAGGGCAGCCTCTAAACGACGTGGGATAGCAATAACATCCATCTCCAGGCCAATTCAGCCATCTGATTTTGTAAATTTTGATCTAATTCTTGCCATGGACAAGCAAAACAGAGAGGATATTTTGGGGGCTTTCGGACGGTGGAGAACTAAGAACGGCCTTCCTCCTGATTCACATAAGAAGGTCAAATTAATGTGCTCGTATTGTAAGAAGCACGACGAAACAGAAGTACCGGATCCTTATTACGGTGGGCAACAAGGTTTTGAGAAGGTTCTCGACTTGCTTGAAGATGCCTGTGAATCGCTCTTGGAAAGCATCTTGGCAGAAAACAAACACATCTCAGATTAA 762 45.67 MGAFQMQLGIDANLVKPLCHLCLASSLNPSPSLVFQPIKYPRLQKFKPSRSSRRTHFATPSTSFTVASSMADSSLSRTSETETKPFSVLFVCLGNICRSPAGEGVFRNLVTKKGLDSKFFIDSAGTIGYHEGNEADPRMRAASKRRGIAITSISRPIQPSDFVNFDLILAMDKQNREDILGAFGRWRTKNGLPPDSHKKVKLMCSYCKKHDETEVPDPYYGGQQGFEKVLDLLEDACESLLESILAENKHISD 253
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 35956304 35958419 - CcPI632755_02g023530.1 Cco02g2353 173110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco02g2353 253 PRINTS LMW phosphotyrosine protein phosphatase signature 131 147 IPR017867 GO:0004725(InterPro)|GO:0006470(InterPro)
Cco02g2353 253 PRINTS LMW phosphotyrosine protein phosphatase signature 215 230 IPR017867 GO:0004725(InterPro)|GO:0006470(InterPro)
Cco02g2353 253 PRINTS LMW phosphotyrosine protein phosphatase signature 88 105 IPR017867 GO:0004725(InterPro)|GO:0006470(InterPro)
Cco02g2353 253 Gene3D - 69 249 - -
Cco02g2353 253 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 67 250 IPR052995 -
Cco02g2353 253 SMART LMWPc_2 86 243 IPR023485 -
Cco02g2353 253 Pfam Low molecular weight phosphotyrosine protein phosphatase 88 241 IPR023485 -
Cco02g2353 253 CDD LMWPTP 87 242 - -
Cco02g2353 253 FunFam Low molecular weight protein-tyrosine-phosphatase 85 249 - -
Cco02g2353 253 SUPERFAMILY Phosphotyrosine protein phosphatases I 84 244 IPR036196 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco02g2353 K25307 - csv:101207515 451.055