Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco02g2423 ATGGTTTTTCACTTGAGAGTTGAGACTACATACATCCCTCCAGCAAAGCCAAAATCTCTCTCAGTACTTAATTCGCTTCCTCACAAATCCCTAGAAGAATTTATGGAACAAACAAAGTACAGAGCCGATCTTCTTTCATCCCTCTTCCTTGTCCTCATCCTTTTACTCTCCCTTTCCGGCCGATCCGCCGTTCATGCCTACAAGAACTACACCGTTGGAGATTCCCTCGGTTGGTTCGACAAATTGGAGAAACCTGCTGTCGATTACCAAGAATGGACCGCTGGCAAGACCTTCGGCCTCGGCGATTTTCTAATTTTTAACACGGACAACAATCACTCGGTCGTGCAAACATACAATTTCACCACATACAAGCTTTGTGACTACGATGATGCATCGGAAAACGACACGACGGAATGGTCTGCCGCCGACCCGTCAGCGACCACTCCCTACGCCGTGACCGTGGCCGTCCCATTGGTGAAAGAAGGGACCAACTATTTCTTCTCCGGCAACTACGACGGAGAGCAATGCCAAAATGGCCAACAATTCAAAATAAACGTCACCCATGGACAAGGCCTCCCAAAAAGCATGAGAGATTCTTCGGACGAAGCTCCAGCTCCAGTAGTTCCCGACACCGGTGACCAAACCGAAGCTGCACCCGACACCATTGTCCCTTCCAGTTTCGACAATCCTCGAAATGACGTCGCTGATAGCGATAAGGAAGCTTCAGGCTCCGACTCGTTATCGCTTTGCATCAAGTTTAATGAGCTCTTCTTCTTGTTAGCTGGTATTGTTTCTGCCTGCTTTTTTCTTTGTACCGAGTGA 822 48.3 MVFHLRVETTYIPPAKPKSLSVLNSLPHKSLEEFMEQTKYRADLLSSLFLVLILLLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQEWTAGKTFGLGDFLIFNTDNNHSVVQTYNFTTYKLCDYDDASENDTTEWSAADPSATTPYAVTVAVPLVKEGTNYFFSGNYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQTEAAPDTIVPSSFDNPRNDVADSDKEASGSDSLSLCIKFNELFFLLAGIVSACFFLCTE 273
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 36604397 36608587 + CcPI632755_02g024230.1 Cco02g2423 173180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco02g2423 273 SUPERFAMILY Cupredoxins 68 186 IPR008972 -
Cco02g2423 273 Pfam Plastocyanin-like domain 80 180 IPR003245 GO:0009055(InterPro)
Cco02g2423 273 Gene3D - 67 191 IPR008972 -
Cco02g2423 273 MobiDBLite consensus disorder prediction 190 244 - -
Cco02g2423 273 FunFam Early nodulin-like protein 18 67 189 - -
Cco02g2423 273 PANTHER BLUE COPPER PROTEIN 54 199 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
Cco02g2423 273 CDD Phytocyanin 68 186 - -
Cco02g2423 273 ProSiteProfiles Phytocyanin domain profile. 68 188 IPR003245 GO:0009055(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco02g2423 Cco-Chr2:36604397 Cco06g0030 Cco-Chr6:305705 2.80E-33 dispersed
Cco02g2423 Cco-Chr2:36604397 Cco08g1283 Cco-Chr8:24616438 1.20E-12 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco02g2423 - - - 0.0