Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco02g2442 ATGTCTTCTTCCGGAATCTCTACCCAAAGCGCCGAATTGTCAGATGCCGTTCAAGAACTAGTAATTTGCGAGCAGTTGGAAATGGGAAAGAAGGTAGAGATTCAAGGAACGGGGAATGGGAGTCATGATGGGGCTTGTGCAATTTGCTTAAATAAGATAGCACTTCAAGAAACTGCTTTAGTGAGAGGCTGCGAGCACGCCTATTGTGCGACTTGCATCCTTCGATGGGCCTCATACACTCAAAAACCGACTTGTCCACAATGTAAACATCCATTTGAGTTCCTGATCGTTCATCGTTCTCTTGATGGGAGCATCCATGACTATATGTTCGAGGAGAGTGTATGCCTGCTTTTGAGAGCTTCGTGGTACAAACCACTGATTGTTGAAGAGCGGGAGGAAACCTATGATGATCCTGAGGACGATCAATACTATCCTTATGATCCTTATGAGGATGACAATGAAGAGTTTGAGGATACTTACCTGGGTGTATCACCAAGTCTCCGTATCGGAAATCGAAGGTGGGGAGATAATGGATACGTGAGGGCAGGTCGACAAGAAGCCCGACCAGTTCTTAGGGCAGAGTTTGCTGGACCTAGTTCATCGAGGGAGCCTGATGAGCCATTGAAGGACTGGGTCGAGTTGTGGGAGGTTTTTCTGGACCAACTCGAACCCAATCACAATCTTACTCACGAGGCCCAATCACAAGATATGGGAACTGAAAGAAGGCAAAGAAAAGAAGACCAACAGCAACTACTTGCTGTAACTGTAAGGGGAAGTCTTTTGCCTTTTGATGTCTATCAATATGGGTTGGTGGCTAAAACCTCCCTTGATGAACTAGCTCCAGCAAATTCAGGCCTAAGAATTGGTTGGGCTTCTTGTCGACCTGCCCTCACGTATCCATTGTCTCCCCCACCCTCCAGTGCTGATTCAGAGATCTGA 939 46.75 MSSSGISTQSAELSDAVQELVICEQLEMGKKVEIQGTGNGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEEREETYDDPEDDQYYPYDPYEDDNEEFEDTYLGVSPSLRIGNRRWGDNGYVRAGRQEARPVLRAEFAGPSSSREPDEPLKDWVELWEVFLDQLEPNHNLTHEAQSQDMGTERRQRKEDQQQLLAVTVRGSLLPFDVYQYGLVAKTSLDELAPANSGLRIGWASCRPALTYPLSPPPSSADSEI 312
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 36783337 36788616 - CcPI632755_02g024420.1 Cco02g2442 173199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco02g2442 312 Pfam Ring finger domain 45 89 IPR001841 -
Cco02g2442 312 SMART ring_2 46 88 IPR001841 -
Cco02g2442 312 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 27 111 IPR013083 -
Cco02g2442 312 CDD RING-HC_Topors 43 92 - -
Cco02g2442 312 ProSitePatterns Zinc finger RING-type signature. 64 73 IPR017907 -
Cco02g2442 312 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 3 208 - -
Cco02g2442 312 SUPERFAMILY RING/U-box 45 96 - -
Cco02g2442 312 ProSiteProfiles Zinc finger RING-type profile. 46 89 IPR001841 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco02g2442 - - - 0.0