Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco02g2478 ATGGCGTCACTGGCGCTTACTTCCTCGTATCTCCCTTCTCTCCGGTCGCGTCTTCCGAAATCCGAATCTAATGCTCAAATTCGTTGCTCCTCTCTCCGTTCCAGTCTTCCCAAACCAGCTATCTTCGGTAGCGGCGTCAGAACTAGCTTCCGCATTCCGCCTTCTTTATCCAATGAAGCTAAATCCGTTAGGCCAGCTCTAAAATTTGGAAGTTCTCGTGGAAATCTCGGTGGTTTTACTGTCCGAGCGTCGTCTTCTTCTGCTGCTGCTGTAGTTCCGGCTCCGGCTCCTCAGCCATGGCAAGGTGCGGCGATTAAGCCACTGATTGCTTCTATTGCTACAGGTATCATTCTGTGGTTTGTTCCAGTGCCGTCTGGCGTTTCTCGAAACGCGTGGCAATTGCTTGCGATTTTCCTCGCTACCATCGTTGGGATTATTACTCAGCCCTTGCCTCTTGGTGCGGTTGCTTTGCTGGGACTGGGCGCCTCTGTTCTGACTAAAACCCTAACCTTCGCTGCTGCCTTCTCTGCGTTTGCTGATCCTATCCCATGGCTCATCGCTCTTGCTTTCTTCTTCGCTCGAGGGTTCATTAAGACCGGACTTGGTAATCGAATTGCTTATCAATTTGTTTCTCTATTCGGTAGTTCGTCGTTAGGGTTAGGGTATAGTTTAGTATTTAGCGAGGCCCTGTTGGCGCCGGCAATTCCTTCGGTGTCGGCCAGAGCAGGAGGGATATTCCTTCCACTGGTAAAATCGCTTTGTGTTGCTTGCGGTAGCAATGTTGGTGATGGGACGGAGAACCGTTTGGGAGCCTGGTTGATGCTAACTTGCTTTCAAACTTCGGTGATTTCATCATCCATGTTCTTGACGGCTATGGCTGCTAATCCTCTGAGTGCGAATCTGACGTATAACACGATTAAGCAGACGATTGGATGGACCGACTGGGCTAAAGCAGCCATTGTTCCAGGATTGATTTCCTTGATTGTGGTGCCATTGCTTTTGTATGTTATTTATCCGCCCACGGTGAAGAGCAGTCCAGACGCACCAAAGCTTGCTAGAGAGAAATTGGAAAAGATGGGACCAATGACCAAGAATGAGATTATAATGGCTGGAACTCTGTTTCTCACGGTGGGTCTTTGGGTTTTTGGAGGGGCACTTAATGTGGACGCTGTTACTGCTGCCATTTTGGGACTGTCCGTCCTTCTTGTAACCGGGGTTGTGACATGGAAAGAGTGCTTGGCAGAAGCTGTTGCCTGGGACACTCTAACTTGGTTTGCTGCACTCATTGCAATGGCAGGGTATCTCAACAAATATGGTCTAATCTCCTGGTTCAGCCAAACTGTAGTGAAGTTTGTTGGCGGCCTAGGTCTTTCATGGCAGCTTTCGTTCGGCATTTTAGTTCTTCTCTACTTCTACTCCCACTACTTCTTTGCAAGTGGAGCTGCTCATATAGGCGCGATGTTTACAGCCTTCTTATCTGTTGCTAGTGCTTTGGGAACTCCCCCTTACTTTGGAGCAATTGTACTTTCCTTCTTATCTAATCTGATGGGTGGCCTAACTCACTATGGCATTGGGTCAGCACCTGTTTTCTATGGGGCTAACTATGTTCCTCTTGCTCAATGGTGGGGCTATGGATTCATCGTATCTGTTGTCAACATCATTATCTGGCTCGGCGCTGGGGGAATTTGGTGGAAGGCCATTGGTTTATGGTGA 1713 48.69 MASLALTSSYLPSLRSRLPKSESNAQIRCSSLRSSLPKPAIFGSGVRTSFRIPPSLSNEAKSVRPALKFGSSRGNLGGFTVRASSSSAAAVVPAPAPQPWQGAAIKPLIASIATGIILWFVPVPSGVSRNAWQLLAIFLATIVGIITQPLPLGAVALLGLGASVLTKTLTFAAAFSAFADPIPWLIALAFFFARGFIKTGLGNRIAYQFVSLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKSLCVACGSNVGDGTENRLGAWLMLTCFQTSVISSSMFLTAMAANPLSANLTYNTIKQTIGWTDWAKAAIVPGLISLIVVPLLLYVIYPPTVKSSPDAPKLAREKLEKMGPMTKNEIIMAGTLFLTVGLWVFGGALNVDAVTAAILGLSVLLVTGVVTWKECLAEAVAWDTLTWFAALIAMAGYLNKYGLISWFSQTVVKFVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVASALGTPPYFGAIVLSFLSNLMGGLTHYGIGSAPVFYGANYVPLAQWWGYGFIVSVVNIIIWLGAGGIWWKAIGLW 570
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 37096938 37100519 - CcPI632755_02g024780.1 Cco02g2478 173235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco02g2478 570 CDD ArsB_NhaD_permease 142 564 - -
Cco02g2478 570 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 14 570 IPR030676 GO:0005215(PANTHER)
Cco02g2478 570 NCBIfam DASS family sodium-coupled anion symporter 122 564 IPR001898 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cco02g2478 570 Pfam Sodium:sulfate symporter transmembrane region 107 570 IPR001898 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco02g2478 Cco-Chr2:37096938 Cco10g0913 Cco-Chr10:19320241 2.20E-125 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco02g2478 - - - 0.0