Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco02g2482 ATGGAGCGTTTGGAGGTGAATTTAGAGGAAACAAGAGAATATTACAAGACTGGAACAACAAAGGAAGCATCTTGGAGAGTTTCACAGCTTAAAGCCTTACGCCAATTTCTGGACCAAAATCGTCAACAAATTTACAATGCCCTTTCTCAAGACTTGGGAAAACACCATGTTGAAGCTTTTAGAGATGAGATTGGTAATCTGGAAATGTCCCTCAATTTCGCATTGGAAAATTTGAAACATTGGATGTCTCCCAAAAAGGCAAAATTGCCAGCAATAGCATTACTGAGTTCAGCAGAAGTGGTTGCCCAGCCTCTGGGCGTTGTTCTTATAATCTCATCTTGGAACTTTCCGTTTGGGTTGTCGTTGGAGCCTTTAATAGGAGCATTAGCAGCCGGAAATTGCGTGTTTCTGAAGACGTCGGAGTATTCTCCGGCAAGTTCAGCTTTTCTGGCCAAAGCCATCGGAAATTATGTTGACAACAAAGCCGTTAGAGTCGTTGAAGGAGGGCCGGCGACCGGCGAGCGCCTGCTGCAGCAGCGCTGGGAGAAGATTTTCTTTACAGGAAGTGAACGAGTGGGGCGGATCGTTATGGCGGCCGCCGTGAAACACTTAACGCCGGTGACATTGGAGCTCGGTGGGAAGTGCCCCGCCATTGTTGACTCCCTATCATTTTCCTGGGATATTGAGTCTACTGCCAAACGGATCGTGATCGGAAAATTTGGAACCTGCGCCGGACAAGCTTGCATAGCAATCGATTATGTTCTTGTTGAACACAAATTTATATCCACCTTGGTCGAATTGCTGAAGAAGTTCATCAAGGAATTCTTCGATAAAAGTCCGAACCTAGCAAGAAGCATCGCGAGGATCGTAAACAAACAAAATTTCTTGAGGTTGAAGAATCTGGTGGATGAACCTGCTGTCCAAGCTGCAATCATCTATGGAGGATCAATGGACGAGGACAAATTGTTTGTGGAGCCGACTATTCTGTTGAATCCACCAAACGATGCAGGAATTATGAGAGATGAAATCTTTGGGCCAATCCTCCCCATAATTGGACTGGACAAGATTGAAGACAGTATAGATTTCGTCAATTCAAGGCCTAAGCCTCTTGCCATTTATGCCTTCACAAAAGACAAAGCTTTCCAAAGGAGACTCGTCTCAGAAACTTCATCCGGCAGCTTGACATTTAATGATGCAATTATTCAGTATGCAGTGGATACACTCCCGTTTGGAGGGGTTGGTGAAAGTGGGATTGGCCGGTACCATGGAAAATTCTCATTCGACACATTTAGTCATGAAAAGGCAATTTTGAAAAGGAGCTTCTTGGTGGACTTCTGGTTCAGATATCCGCCCTGGAACAATCACAAGCTTCAGCTGCTTAAACACGCTTACAATCTTAACTATTTTCAGTTTGTTCTTATTGTTTTGGGTCTTAAAAAGTCTTAA 1446 44.19 MERLEVNLEETREYYKTGTTKEASWRVSQLKALRQFLDQNRQQIYNALSQDLGKHHVEAFRDEIGNLEMSLNFALENLKHWMSPKKAKLPAIALLSSAEVVAQPLGVVLIISSWNFPFGLSLEPLIGALAAGNCVFLKTSEYSPASSAFLAKAIGNYVDNKAVRVVEGGPATGERLLQQRWEKIFFTGSERVGRIVMAAAVKHLTPVTLELGGKCPAIVDSLSFSWDIESTAKRIVIGKFGTCAGQACIAIDYVLVEHKFISTLVELLKKFIKEFFDKSPNLARSIARIVNKQNFLRLKNLVDEPAVQAAIIYGGSMDEDKLFVEPTILLNPPNDAGIMRDEIFGPILPIIGLDKIEDSIDFVNSRPKPLAIYAFTKDKAFQRRLVSETSSGSLTFNDAIIQYAVDTLPFGGVGESGIGRYHGKFSFDTFSHEKAILKRSFLVDFWFRYPPWNNHKLQLLKHAYNLNYFQFVLIVLGLKKS 481
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 37147163 37152926 + CcPI632755_02g024820.1 Cco02g2482 173239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco02g2482 481 Pfam Aldehyde dehydrogenase family 10 435 IPR015590 GO:0016491(InterPro)
Cco02g2482 481 FunFam Aldehyde dehydrogenase 12 219 - -
Cco02g2482 481 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 213 416 IPR016163 GO:0016620(InterPro)
Cco02g2482 481 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 12 434 IPR016162 GO:0016491(InterPro)
Cco02g2482 481 FunFam Aldehyde dehydrogenase 213 416 - -
Cco02g2482 481 PIRSF ALDH 1 474 IPR012394 GO:0006081(InterPro)
Cco02g2482 481 PANTHER ALDEHYDE DEHYDROGENASE 3 478 IPR012394 GO:0004029(PANTHER)|GO:0005737(PANTHER)|GO:0006081(PANTHER)|GO:0006081(InterPro)
Cco02g2482 481 SUPERFAMILY ALDH-like 9 454 IPR016161 GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco02g2482 Cco-Chr2:37147163 Cco07g0963 Cco-Chr7:22301173 4.30E-162 dispersed
Cco02g2482 Cco-Chr2:37147163 Cco06g1872 Cco-Chr6:28937996 2.00E-26 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco02g2482 K00128 - csv:101205263 860.522