Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cco02g2522 ATGCGGTCTCACGACCTTTACAAAGTACAAACGGACCCTAAATCGTTCTTCCTCACCAACTTCGAAGGACTTTCCGCTTCCGGTGCTTTTCCGGCCGCCGTTTCTTGCTCGTCCGAGATTGTCCTGCTTCATTTAATCGTGTCTGAAGTTATTTCCATATTTCCGCATTTACCCATGGGAGAAGACGATGAACAGGATAGACAGAAGATCACAAATCTTCATCTAAGATCGGAAAGGATTACTATGGGCCATCAACAGATGGCAAACCAGCCTCATGTAATCAATCAGTCCCAAGTTATGAACCAGCCTCAGTCTCAAGTTATGAACCAGCCACAGGCCATCAACCAGCCAAATCTTTTGCCGCAACCTCAGGCCATGCAGCAGTCCCAGATGATCATGAGTCACTCTCTGCCGCCTATGATGAGTGGCAACTATAAGTCAAGATCAGGGCGAGGAAATTGGAAGGGAAAAGGTGTTAGTGACAAAAGGATAAACAATAGGAGAATGGAAAAACCTTTACCGGGTTCCATGAGTGGTCCAAATAGTGCTGTAGGGTATCAACCTCCAAGTCTTCATGAGCTGCAGTCTCAAAATCGTTTAAGGGCTCGTAAGTTTTACTCTAAAAAGAAGTTCGGTAATAGATTTGCACCTTATGCGCCTCGTAATACCACGTCTTTTATCATTCGTGCAAAGAAGTCTGGTGGGATCGCTTCGCTTGTGTCCCCTAGTCCCGTAACACCCGCTGTGCTTCCTACTCCAATGTTTTCCCCTTCAAGGGAGGCGTTGGGTGATATGGCCAAGGAGGAATGGGGTGTTGATGGTTATGGATCAATGAAAGGGTTGATAAGGCTTCGAGGGTCTGAGAATAAGGCAGAAGTGCAGGATGAGGAAGAAGAGGAAGTTGGTGGTGGTTCGAGTGATAGTGATGTAGAGGAACATCTGGAGGTAGAACGCAGATTGGACCATGATTTGAGCCGATTTGAAATGATATATCAGAACTATGGAGTAGAGTATAATAACTGTTTGGAAAATAGGGTCGATGATCAAGATAGCCATATAGCTCAGTTGGAGGAGGAGAACTTGACACTGAAGGAGAAACTTTTTCTTATGGAGAGAGAGCTTGTTGACTTGAGGAGGAAGTTGCAACTTCTCGAGGGGCAAAACCCAGCTATTGAAGATGTAAATGAGGAGGTAGTGGAGAACGTATCTGAGAATGAGAGTGATGGAGGGTTGGAGATGGAGTATGTATCTGAAATTAGACAAAACCAAGATGCTGATGTTGATTCTAAGGAGGAAGATGAAGAAGTCTTAGAGATTGAGGGTGGGGAAGAATGTGTAGGGGAAGATTTCAAGAGAGAGAAAGTGATTGAAAAGACATACATAGTGAATGATGAAACCGTGAAGGAATCAGATGAACAGATTCCGGAAGACGTTGTGGCAAAAGATGATGAATCAAAGGGTGAACTTATTTCAGGGAAGGTAAATGAATGTGACAATATGGACGAAAACTTGGGTAATATTTTGCACACGGATTCAGGGATTGGAAAAGAAGCCATGGTCAATGATGAAGCCGAGCAGAATAGAGTTGTATCTGTAAAAGTACCTGTAGATGTAAAGGAAGGGTGTGAAGAAATAACGGAGGATTCTATCTCACTTTTTGGGATTGTACAGTTTTTGTACCAAAGCGAGTCATACGGCTCTTCTAGTAAAGATTTTGGACATGATCATTTGCTTGCATTGGCCTTCCTGCGACGTCTAGATTCTGAGGATTCGTTTGCCATCTGGGAAATGAGCTGTTGCTGTAAGTTTACTTCTGATGTAGTTGCTTCGTTAGGTCTAATGGCTGTTAGTCACTCAAGTCTTCCTCTTATCCTGTGCATGGACTTAAAGTTTGGTCTGTGCCTATTCTTTGTAGTCATGGATGAGCCTTCCATCAGTTCCACAAGCTCGCAATTAACTGTGGATTTCTATAAGAGTTCATGTCCGAATGTTCTCAGAATCGTAAGGGGAGAAGTCATGATTGCTATTAAGAATGAGATGCGAATGGCTGCTTCACTTCTTCGCCTCCACTTCCACGACTGCTTTGTTAATGGTTGTGACGGATCCGTGCTGTTGGATGGAAGTGATGGGGAGAAATTTGCACTTCCCAACATCAATTCTCTTAGAGGGCTTGAAGTTGTGGACAGAATCAAAGCCGCACTGGAGAATTCATGCCCCGGAGTTGTATCATGTGCTGATTTATTAACTATAGCTGCAAGAGATTCTGTCCTCTTGAGTGGAGGACCGTCATGGAAGGTTTTATTGGGGAGAAGGGATGGATTGGTAGCGAATAAAACAGGAGCTGATCAAGGACTTCCCTCTCCATTTGAAAGCCTTGATGGTATAATCAACAAGTTTGTTGATGTTGGCCTTGGGGTCACCGACGTCGTCGCTTTATCTGGAGCCCATACAATTGGACTTGCAAGATGTGCAATGTTCAACAATAGGCTGTTCAACTTCTCAGGAAGTGGTTCTCCAGACCCAAACATGGAGTCCGCCATGGTATCTGATCTCCAAGCTTTATGCCCTCTCACCGACGACGGCAACAAGACCACCGTTCTCGACAGAAACTCCACCGATTTATTCGACAACCATTACTTCAAAAACTTGCTCAACCGGAAGGGCCTCTTGGGCTCCGACCAAATTCTGTTCTCCGACTCCACCACTACAAAAGCCTTGGTCCAAGCTTATAGCTCTAACACCACGCTTTTCTTCGCCGACTTTGTCAAAGCCATGATCAAGATGGGGAATATAAGTCCACTCACCGGCTCCGCCGGTCAGATCCGAAACAACTGCAGACTCCTTAATTCCTCCTAA 2856 44.75 MRSHDLYKVQTDPKSFFLTNFEGLSASGAFPAAVSCSSEIVLLHLIVSEVISIFPHLPMGEDDEQDRQKITNLHLRSERITMGHQQMANQPHVINQSQVMNQPQSQVMNQPQAINQPNLLPQPQAMQQSQMIMSHSLPPMMSGNYKSRSGRGNWKGKGVSDKRINNRRMEKPLPGSMSGPNSAVGYQPPSLHELQSQNRLRARKFYSKKKFGNRFAPYAPRNTTSFIIRAKKSGGIASLVSPSPVTPAVLPTPMFSPSREALGDMAKEEWGVDGYGSMKGLIRLRGSENKAEVQDEEEEEVGGGSSDSDVEEHLEVERRLDHDLSRFEMIYQNYGVEYNNCLENRVDDQDSHIAQLEEENLTLKEKLFLMERELVDLRRKLQLLEGQNPAIEDVNEEVVENVSENESDGGLEMEYVSEIRQNQDADVDSKEEDEEVLEIEGGEECVGEDFKREKVIEKTYIVNDETVKESDEQIPEDVVAKDDESKGELISGKVNECDNMDENLGNILHTDSGIGKEAMVNDEAEQNRVVSVKVPVDVKEGCEEITEDSISLFGIVQFLYQSESYGSSSKDFGHDHLLALAFLRRLDSEDSFAIWEMSCCCKFTSDVVASLGLMAVSHSSLPLILCMDLKFGLCLFFVVMDEPSISSTSSQLTVDFYKSSCPNVLRIVRGEVMIAIKNEMRMAASLLRLHFHDCFVNGCDGSVLLDGSDGEKFALPNINSLRGLEVVDRIKAALENSCPGVVSCADLLTIAARDSVLLSGGPSWKVLLGRRDGLVANKTGADQGLPSPFESLDGIINKFVDVGLGVTDVVALSGAHTIGLARCAMFNNRLFNFSGSGSPDPNMESAMVSDLQALCPLTDDGNKTTVLDRNSTDLFDNHYFKNLLNRKGLLGSDQILFSDSTTTKALVQAYSSNTTLFFADFVKAMIKMGNISPLTGSAGQIRNNCRLLNSS 951
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 37558035 37570266 + CcPI632755_02g025220.1 Cco02g2522 173279
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cco02g2522 951 ProSitePatterns Peroxidases active site signature. 683 694 IPR019794 GO:0004601(InterPro)
Cco02g2522 951 MobiDBLite consensus disorder prediction 286 313 - -
Cco02g2522 951 ProSiteProfiles Plant heme peroxidase family profile. 651 949 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco02g2522 951 Gene3D - 655 949 - -
Cco02g2522 951 SUPERFAMILY Heme-dependent peroxidases 651 949 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco02g2522 951 FunFam Peroxidase 786 928 - -
Cco02g2522 951 Coils Coil 339 387 - -
Cco02g2522 951 PRINTS Haem peroxidase superfamily signature 742 759 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco02g2522 951 PRINTS Haem peroxidase superfamily signature 760 772 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco02g2522 951 PRINTS Haem peroxidase superfamily signature 683 697 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco02g2522 951 PRINTS Haem peroxidase superfamily signature 868 883 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco02g2522 951 PRINTS Haem peroxidase superfamily signature 808 823 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco02g2522 951 PANTHER OS02G0832600 PROTEIN 120 440 - -
Cco02g2522 951 Pfam Peroxidase 668 913 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco02g2522 951 CDD secretory_peroxidase 651 946 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cco02g2522 951 Gene3D Peroxidase, domain 2 786 928 - -
Cco02g2522 951 MobiDBLite consensus disorder prediction 467 486 - -
Cco02g2522 951 FunFam Peroxidase 655 795 - -
Cco02g2522 951 PRINTS Plant peroxidase signature 722 735 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco02g2522 951 PRINTS Plant peroxidase signature 741 751 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco02g2522 951 PRINTS Plant peroxidase signature 923 936 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco02g2522 951 PRINTS Plant peroxidase signature 866 881 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco02g2522 951 PRINTS Plant peroxidase signature 882 899 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco02g2522 951 PRINTS Plant peroxidase signature 807 819 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco02g2522 951 PRINTS Plant peroxidase signature 760 775 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco02g2522 951 PRINTS Plant peroxidase signature 661 680 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco02g2522 951 PRINTS Plant peroxidase signature 685 705 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco02g2522 951 ProSitePatterns Peroxidases proximal heme-ligand signature. 808 818 IPR019793 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco02g2522 Cco-Chr2:37558035 Cco04g1423 Cco-Chr4:29638604 2.10E-88 dispersed
Cco09g0361 Cco-Chr9:3243230 Cco02g2522 Cco-Chr2:37558035 3.50E-60 dispersed
Cco09g1705 Cco-Chr9:28469272 Cco02g2522 Cco-Chr2:37558035 4.10E-63 dispersed
Cco02g2522 Cco-Chr2:37558035 Cco02g2523 Cco-Chr2:37574647 2.10E-83 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco02g2522 K00430 - csv:101211007 803.897