Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco02g2529 | ATGGCCTCCGCCAATGCCGCAGCCTCCTTTTTCTTTCTGGCTCTTCTCTTCGGAGGCTCTTTAGCTCAACTCTCCGAGACCTTTTACGATCAAACCTGCCCTCGCCTCCCCAACATTGTCCGTGCCTCTGTCAAAAGAGCTATCGAAACCGACATCCGTGCCGGTGCTAAACTCATCCGCCTTCATTTCCATGACTGCTTCGTCAATGGATGTGATGGCTCTGTTTTGCTAGAAGATGCTCCTGGCATAGTCAGTGAGCTCAACTCACCTGGAAATCAGGGAATCCAAGGCCTCGAGATTGTTGACGCCATTAAAGCCGACGTTGAGAGGGAATGCCCCGGCATCGTCTCCTGTGCCGACATTCTAGCTCAAGCTTCCAAGGACTCTGTGGATGTGCAAGGAGGGCCTAGTTGGAGAGTGTTATACGGAAGACGAGACAGTAGAATAGCGAACAAAACAGGGGCGGATAGTGGGTTGGCCAGTCCCTTCGAAACTCTAGACCAACTCAAAGCTAAATTTGCTGCTGTTGGCCTTGGTACCACTGATCTCGTCGCTTTATCAGGAGCGCATACGTTTGGTCGATCGAGATGCAGATTCTTCAGCCATCGATTTGCGAATTTCAACAACACTGGAAGGCCAGACCCATCACTGGATGCTAACTACAGAGGATTCCTTGAAGGGGTTTGCTCAGCAGGTCCAGACACAAGAGCCAATTTCGACCCAGTAACACCCGACGTGTTCGACAAAAACTACTACACAAATCTTCAAGTTGGGAAGGGGCTTCTGCAAAGTGACCAAGAGCTGTTCTCTACTCCAGGGGCTGACACCATCGCCATTGTCAACAGCTTCGCAGCCAGAGAAGGCACCTTCTTCAAGGAGTTCCGGCAGTCCATGATCAACATGGGGAACATCAAGCCTTTGACTGGTAGCCGTGGGGAAATTAGAAGAAACTGCAGGAGGGTTAACTCTGGGTTGGGTGGAGAAGGGCATGATGTTATGTAA | 1002 | 50.8 | MASANAAASFFFLALLFGGSLAQLSETFYDQTCPRLPNIVRASVKRAIETDIRAGAKLIRLHFHDCFVNGCDGSVLLEDAPGIVSELNSPGNQGIQGLEIVDAIKADVERECPGIVSCADILAQASKDSVDVQGGPSWRVLYGRRDSRIANKTGADSGLASPFETLDQLKAKFAAVGLGTTDLVALSGAHTFGRSRCRFFSHRFANFNNTGRPDPSLDANYRGFLEGVCSAGPDTRANFDPVTPDVFDKNYYTNLQVGKGLLQSDQELFSTPGADTIAIVNSFAAREGTFFKEFRQSMINMGNIKPLTGSRGEIRRNCRRVNSGLGGEGHDVM | 333 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 37631587 | 37632855 | + | CcPI632755_02g025290.1 | Cco02g2529 | 173286 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco02g2529 | 333 | PANTHER | PEROXIDASE 72-RELATED | 13 | 321 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco02g2529 | 333 | ProSitePatterns | Peroxidases active site signature. | 55 | 66 | IPR019794 | GO:0004601(InterPro) | |
Cco02g2529 | 333 | Gene3D | - | 28 | 322 | - | - | |
Cco02g2529 | 333 | PRINTS | Haem peroxidase superfamily signature | 55 | 69 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco02g2529 | 333 | PRINTS | Haem peroxidase superfamily signature | 116 | 133 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco02g2529 | 333 | PRINTS | Haem peroxidase superfamily signature | 134 | 146 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco02g2529 | 333 | PRINTS | Haem peroxidase superfamily signature | 182 | 197 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco02g2529 | 333 | PRINTS | Haem peroxidase superfamily signature | 240 | 255 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco02g2529 | 333 | FunFam | Peroxidase | 27 | 173 | - | - | |
Cco02g2529 | 333 | FunFam | Peroxidase | 160 | 301 | - | - | |
Cco02g2529 | 333 | CDD | secretory_peroxidase | 23 | 321 | IPR033905 | GO:0004601(InterPro)|GO:0042744(InterPro) | |
Cco02g2529 | 333 | SUPERFAMILY | Heme-dependent peroxidases | 23 | 322 | IPR010255 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco02g2529 | 333 | PRINTS | Plant peroxidase signature | 134 | 149 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco02g2529 | 333 | PRINTS | Plant peroxidase signature | 181 | 193 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco02g2529 | 333 | PRINTS | Plant peroxidase signature | 96 | 109 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco02g2529 | 333 | PRINTS | Plant peroxidase signature | 115 | 125 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco02g2529 | 333 | PRINTS | Plant peroxidase signature | 254 | 271 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco02g2529 | 333 | PRINTS | Plant peroxidase signature | 33 | 52 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco02g2529 | 333 | PRINTS | Plant peroxidase signature | 57 | 77 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco02g2529 | 333 | PRINTS | Plant peroxidase signature | 238 | 253 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco02g2529 | 333 | PRINTS | Plant peroxidase signature | 296 | 309 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco02g2529 | 333 | ProSiteProfiles | Plant heme peroxidase family profile. | 23 | 322 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco02g2529 | 333 | Gene3D | Peroxidase, domain 2 | 160 | 301 | - | - | |
Cco02g2529 | 333 | Pfam | Peroxidase | 40 | 285 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco02g2529 | 333 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 182 | 192 | IPR019793 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco02g2523 | Cco-Chr2:37574647 | Cco02g2529 | Cco-Chr2:37631587 | 1.20E-110 | dispersed | |
Cco02g2524 | Cco-Chr2:37581212 | Cco02g2529 | Cco-Chr2:37631587 | 1.00E-125 | dispersed | |
Cco02g2525 | Cco-Chr2:37589944 | Cco02g2529 | Cco-Chr2:37631587 | 1.60E-112 | dispersed | |
Cco02g2526 | Cco-Chr2:37594112 | Cco02g2529 | Cco-Chr2:37631587 | 3.50E-107 | dispersed | |
Cco02g2527 | Cco-Chr2:37602295 | Cco02g2529 | Cco-Chr2:37631587 | 1.30E-141 | dispersed | |
Cco02g2529 | Cco-Chr2:37631587 | Cco02g2531 | Cco-Chr2:37650492 | 6.90E-103 | dispersed | |
Cco09g0461 | Cco-Chr9:4087684 | Cco02g2529 | Cco-Chr2:37631587 | 1.80E-63 | dispersed | |
Cco02g2528 | Cco-Chr2:37609269 | Cco02g2529 | Cco-Chr2:37631587 | 6.80E-135 | tandem | |
Cco02g2529 | Cco-Chr2:37631587 | Cco02g2530 | Cco-Chr2:37640777 | 1.00E-106 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco02g2529 | K00430 | - | csv:101217543 | 592.038 |