Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco02g2578 | ATGCCGACCAGTTTGGTCCCTTCTCACAGACCGGAGCTTCTCACCGTCGCCGTCGCTGTGGTTGCTGTCGGCGTTGCCACTGCCTACTATTTCTTCATCACCAAGAAATCCAAACCCAAAGGTTGCTTGGATCCTAATAACTTCAAGGAATTTAAACTAGTTAAACGCACACAGCTTAGCCATAATGTAGCAAAGTTCAGATTCTCTCTTCCGACGCCAACCTCAATTTTGGGTCTGCCCATTGGGCAGCATATCAGCTGCAGAGGAAAAGATAGCGAAGGTGGAGATGTTGTGAAACCTTACACTCCAACCACTTTGGACACAGATGTTGGATACTTTGATTTGGTCATAAAGATGTATCCACAAGGAAGGATGTCCCACCACTTCCGTGAGATGCGTGAAGGTGATTACTTGGCTGTGAAAGGTCCAAAGGGACGATTCAAGTATGCACCTAATGAAGTTGAGGCCTATGGAATGCTTGCTGGAGGCACAGGCATAACTCCTATGTTCCAGGTTGCAAGAGCAATACTAGAAAATCCAGTGGATCACACCAATGTGCATCTTATATATGCTAATGTAACTTATGAAGACATTCTTCTAAAGGAAGAATTGGATAGTCTTGCGGCTAGGTTTCCCACCCGCTTTACTATCTACTATGTGCTCAATCAGCCTCCTGAAGGATGGGATGGTGGTGTTGGCTTCATAACTGAGGAAATGATACGACTACACTGTCCTGCGCCATCCCCTAATGTTCGGATTTTGAGGTGCGGGCCACCTCCCATGAACAAAGCTATGGCTGCTTACCTCAACACTATTGGCCATCCTCCCCAAATGCAGTTCCTGTTCTAA | 849 | 46.41 | MPTSLVPSHRPELLTVAVAVVAVGVATAYYFFITKKSKPKGCLDPNNFKEFKLVKRTQLSHNVAKFRFSLPTPTSILGLPIGQHISCRGKDSEGGDVVKPYTPTTLDTDVGYFDLVIKMYPQGRMSHHFREMREGDYLAVKGPKGRFKYAPNEVEAYGMLAGGTGITPMFQVARAILENPVDHTNVHLIYANVTYEDILLKEELDSLAARFPTRFTIYYVLNQPPEGWDGGVGFITEEMIRLHCPAPSPNVRILRCGPPPMNKAMAAYLNTIGHPPQMQFLF | 282 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 38044606 | 38047472 | - | CcPI632755_02g025780.1 | Cco02g2578 | 173335 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco02g2578 | 282 | SUPERFAMILY | Ferredoxin reductase-like, C-terminal NADP-linked domain | 138 | 277 | IPR039261 | - | |
Cco02g2578 | 282 | Pfam | Oxidoreductase FAD-binding domain | 51 | 149 | IPR008333 | - | |
Cco02g2578 | 282 | CDD | cyt_b5_reduct_like | 51 | 282 | - | - | |
Cco02g2578 | 282 | Gene3D | - | 140 | 282 | IPR039261 | - | |
Cco02g2578 | 282 | ProSiteProfiles | Ferredoxin reductase-type FAD binding domain profile. | 46 | 150 | IPR017927 | GO:0016491(InterPro) | |
Cco02g2578 | 282 | PRINTS | Cytochrome B5 reductase signature | 196 | 207 | - | - | |
Cco02g2578 | 282 | PRINTS | Cytochrome B5 reductase signature | 77 | 88 | - | - | |
Cco02g2578 | 282 | PRINTS | Cytochrome B5 reductase signature | 135 | 149 | - | - | |
Cco02g2578 | 282 | PRINTS | Cytochrome B5 reductase signature | 99 | 106 | - | - | |
Cco02g2578 | 282 | PRINTS | Cytochrome B5 reductase signature | 158 | 177 | - | - | |
Cco02g2578 | 282 | PRINTS | Cytochrome B5 reductase signature | 252 | 260 | - | - | |
Cco02g2578 | 282 | FunFam | NADH-cytochrome b5 reductase | 41 | 140 | - | - | |
Cco02g2578 | 282 | FunFam | NADH-cytochrome b5 reductase | 140 | 282 | - | - | |
Cco02g2578 | 282 | SUPERFAMILY | Riboflavin synthase domain-like | 42 | 152 | IPR017938 | - | |
Cco02g2578 | 282 | Pfam | Oxidoreductase NAD-binding domain | 159 | 265 | IPR001433 | GO:0016491(InterPro) | |
Cco02g2578 | 282 | PRINTS | Flavoprotein pyridine nucleotide cytochrome reductase signature | 196 | 207 | IPR001709 | GO:0016491(InterPro) | |
Cco02g2578 | 282 | PRINTS | Flavoprotein pyridine nucleotide cytochrome reductase signature | 252 | 260 | IPR001709 | GO:0016491(InterPro) | |
Cco02g2578 | 282 | PRINTS | Flavoprotein pyridine nucleotide cytochrome reductase signature | 158 | 177 | IPR001709 | GO:0016491(InterPro) | |
Cco02g2578 | 282 | PANTHER | NADH-CYTOCHROME B5 REDUCTASE | 17 | 282 | IPR001834 | GO:0004128(PANTHER)|GO:0016491(InterPro)|GO:0022900(PANTHER) | |
Cco02g2578 | 282 | Gene3D | Translation factors | 38 | 139 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco02g2578 | Cco-Chr2:38044606 | Cco04g0671 | Cco-Chr4:21158968 | 1.30E-118 | dispersed | |
Cco02g2578 | Cco-Chr2:38044606 | Cco11g1602 | Cco-Chr11:28873764 | 2.80E-44 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco02g2578 | K00326 | - | csv:101219272 | 505.753 |