Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco02g2593 | ATGAAGCAATGGAGAGGCTTAAATTCAGAATCTCTTGCAACCTTATGGGTATTGTGCACAGCTCTAGCTCTAGCTCCAGCTCCATTTGTTGGATCGATCTCATCTCCAAAGCACCAATTTCGTGGAATTTCTCCCCAAGATGAGATGTATTACAAGTCGTCGGGCATGATCAAATGTAGAGACGGTTCCAACAAATTTTCCAAGGCTCAGCTTAACGATAACTACTGCGATTGCCCTGATGGCACTGACGAACCTGGCACATCTGCATGCCCGAATGGGAAGTTCTATTGTCGAAATGCAGGGCACGTTCCACTTTTATTGTTTTCTTCAAGGGTGAACGACGATATATGTGATTGTTGTGATGGAAGTGACGAATATGACAGCAAAGTCAAATGCCCAAATACGTGCTGGGAAACTGGGAAAGTGGCAAGAGATAAATTGAAGAAAAAGATTTCAACCTTTGAAGAAGGTGTTAAAATTAGAAAACAAGAAGTCGAACAGGCAAAAATTGCAATAATCAAGGATGAGGCAGAGCTATTGAAGTTGAAAGATGAGGAAAAAGTATTAAAAGGACTCGTTGAACAACTCAAAGAGCGCAAAGAACAAATAGAGAAGGTAGAAGAGGAGGAGCGGTTATGGAAAGAAAAAGAGGAAAAGAAACGTTTGGAGAGAGAAAAAGATGGGACTAAAAAAACTGAGTCAGAAACAACTAGTGTTGGGGAAAGCAAAACTCATGAAGAAGACAATTGGAAAAAAAATGAAGCTATAGAAAATTATGACAAGGAATATAAACAAGGAGAAGGCAACGATGATGATAAAATTGGGAACTGGGAGGACTCTACCACAGATCAGCAGGCTAGGATGGAAGAAGAAGTTGATTCAGAACTCGAAGCTCAACTTTCTAATAAACCTGAAACAGAAGCATCATTGCTGAAAGAGGATACAGCAGTAGAGAACGACGAACCCCTGGCTAAATCTGAAACTGGAGAAAATGCTGGCACTAAAGAATCATCTGAAGAAGTCTTGAGAAAGAATGATGCTAGTTCAGAGTTGTCAAGGGAAGAGTTGGGCCGCCTTGTTGCTTCTCGTTGGACAGGAGAAAATACTGAAGAACAGTCAGGGAACATGGATAGTACGAACGATAGTGATGAAGAAAGTCATGATATCTCAAAAGACACACATGAAAATGACGGTTATGCTTCAGAGACTGATGATGATAACCAAAGATACGATGATGACCTAGAGGGTGATTTAGAAGATATCAGAGATGAATTTCGTGATGATTCTACTTCGTCTGAAAGATATTATTCAGATACAGAATTGGACTCACCAGATGTGGATACCCAAAGTAACCCATCCTGGCTTGAGAAGATACAAAAAACTGTTCGAAATGTCCTCAAAGCTGTTAATATATTCCAGTCTCCAGTGAACCAATCAGATGCTGCTAACGTGCGCAAGGAATATGATGAGTCTAGTGCCAAGCTATCAAAAATACAGTCAAGGATCTCAAGTTTATCACAGAAGCTAAAAAATGATTTTGGTCCAGAGAAGGAGTTCTATTCATTCTATGACCAATGTTTTGAAAGCAAGGAGAACAAATACGTTTACAAAATCTGTCCTTATAAACAAGCTTCGCAGGTTGAAGGGCACTCGACTACTCGTTTGGGGCGCTGGGATAAATTTGAGGACTCATATAGGGTTATGATCTTTTCGAGTGGGGATACGTGCTGGAATGGACCTGATAGAAGCTTAAAGGTCAAGCTAAGATGTGGGCTTAAAAATGACATAACCGATGTAGATGAACCAAGCCGTTGCGAGTACGTGGCATTGTTATCAACCCCAGCTGCTTGTGTAGAGGAAAAGCTTCAGGAACTGAAACACAAGTTGGACATGCTGAGTAAAGAAGAGGCAGAGAAGCATGATGAACTTTGA | 1932 | 40.73 | MKQWRGLNSESLATLWVLCTALALAPAPFVGSISSPKHQFRGISPQDEMYYKSSGMIKCRDGSNKFSKAQLNDNYCDCPDGTDEPGTSACPNGKFYCRNAGHVPLLLFSSRVNDDICDCCDGSDEYDSKVKCPNTCWETGKVARDKLKKKISTFEEGVKIRKQEVEQAKIAIIKDEAELLKLKDEEKVLKGLVEQLKERKEQIEKVEEEERLWKEKEEKKRLEREKDGTKKTESETTSVGESKTHEEDNWKKNEAIENYDKEYKQGEGNDDDKIGNWEDSTTDQQARMEEEVDSELEAQLSNKPETEASLLKEDTAVENDEPLAKSETGENAGTKESSEEVLRKNDASSELSREELGRLVASRWTGENTEEQSGNMDSTNDSDEESHDISKDTHENDGYASETDDDNQRYDDDLEGDLEDIRDEFRDDSTSSERYYSDTELDSPDVDTQSNPSWLEKIQKTVRNVLKAVNIFQSPVNQSDAANVRKEYDESSAKLSKIQSRISSLSQKLKNDFGPEKEFYSFYDQCFESKENKYVYKICPYKQASQVEGHSTTRLGRWDKFEDSYRVMIFSSGDTCWNGPDRSLKVKLRCGLKNDITDVDEPSRCEYVALLSTPAACVEEKLQELKHKLDMLSKEEAEKHDEL | 643 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 38178571 | 38202221 | + | CcPI632755_02g025930.1 | Cco02g2593 | 173350 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco02g2593 | 643 | PANTHER | N-LINKED OLIGOSACCHARIDE PROCESSING | 21 | 626 | IPR039794 | GO:0006491(PANTHER)|GO:0017177(PANTHER) | |
Cco02g2593 | 643 | MobiDBLite | consensus disorder prediction | 218 | 452 | - | - | |
Cco02g2593 | 643 | SUPERFAMILY | Mannose 6-phosphate receptor domain | 524 | 617 | IPR009011 | - | |
Cco02g2593 | 643 | Coils | Coil | 481 | 501 | - | - | |
Cco02g2593 | 643 | Pfam | Glucosidase II beta subunit-like | 34 | 170 | IPR028146 | - | |
Cco02g2593 | 643 | Pfam | Glucosidase II beta subunit-like protein | 485 | 643 | IPR036607 | - | |
Cco02g2593 | 643 | MobiDBLite | consensus disorder prediction | 423 | 441 | - | - | |
Cco02g2593 | 643 | MobiDBLite | consensus disorder prediction | 307 | 325 | - | - | |
Cco02g2593 | 643 | Coils | Coil | 615 | 642 | - | - | |
Cco02g2593 | 643 | Coils | Coil | 165 | 232 | - | - | |
Cco02g2593 | 643 | Gene3D | - | 519 | 618 | IPR009011 | - | |
Cco02g2593 | 643 | ProSiteProfiles | MRH domain profile. | 524 | 619 | IPR044865 | - | |
Cco02g2593 | 643 | MobiDBLite | consensus disorder prediction | 332 | 357 | - | - | |
Cco02g2593 | 643 | MobiDBLite | consensus disorder prediction | 218 | 300 | - | - | |
Cco02g2593 | 643 | MobiDBLite | consensus disorder prediction | 406 | 422 | - | - | |
Cco02g2593 | 643 | MobiDBLite | consensus disorder prediction | 380 | 405 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco02g0234 | Cco-Chr2:2216805 | Cco02g2593 | Cco-Chr2:38178571 | 2.40E-24 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco02g2593 | K08288 | - | csv:101221877 | 1092.8 |