Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco02g2593 ATGAAGCAATGGAGAGGCTTAAATTCAGAATCTCTTGCAACCTTATGGGTATTGTGCACAGCTCTAGCTCTAGCTCCAGCTCCATTTGTTGGATCGATCTCATCTCCAAAGCACCAATTTCGTGGAATTTCTCCCCAAGATGAGATGTATTACAAGTCGTCGGGCATGATCAAATGTAGAGACGGTTCCAACAAATTTTCCAAGGCTCAGCTTAACGATAACTACTGCGATTGCCCTGATGGCACTGACGAACCTGGCACATCTGCATGCCCGAATGGGAAGTTCTATTGTCGAAATGCAGGGCACGTTCCACTTTTATTGTTTTCTTCAAGGGTGAACGACGATATATGTGATTGTTGTGATGGAAGTGACGAATATGACAGCAAAGTCAAATGCCCAAATACGTGCTGGGAAACTGGGAAAGTGGCAAGAGATAAATTGAAGAAAAAGATTTCAACCTTTGAAGAAGGTGTTAAAATTAGAAAACAAGAAGTCGAACAGGCAAAAATTGCAATAATCAAGGATGAGGCAGAGCTATTGAAGTTGAAAGATGAGGAAAAAGTATTAAAAGGACTCGTTGAACAACTCAAAGAGCGCAAAGAACAAATAGAGAAGGTAGAAGAGGAGGAGCGGTTATGGAAAGAAAAAGAGGAAAAGAAACGTTTGGAGAGAGAAAAAGATGGGACTAAAAAAACTGAGTCAGAAACAACTAGTGTTGGGGAAAGCAAAACTCATGAAGAAGACAATTGGAAAAAAAATGAAGCTATAGAAAATTATGACAAGGAATATAAACAAGGAGAAGGCAACGATGATGATAAAATTGGGAACTGGGAGGACTCTACCACAGATCAGCAGGCTAGGATGGAAGAAGAAGTTGATTCAGAACTCGAAGCTCAACTTTCTAATAAACCTGAAACAGAAGCATCATTGCTGAAAGAGGATACAGCAGTAGAGAACGACGAACCCCTGGCTAAATCTGAAACTGGAGAAAATGCTGGCACTAAAGAATCATCTGAAGAAGTCTTGAGAAAGAATGATGCTAGTTCAGAGTTGTCAAGGGAAGAGTTGGGCCGCCTTGTTGCTTCTCGTTGGACAGGAGAAAATACTGAAGAACAGTCAGGGAACATGGATAGTACGAACGATAGTGATGAAGAAAGTCATGATATCTCAAAAGACACACATGAAAATGACGGTTATGCTTCAGAGACTGATGATGATAACCAAAGATACGATGATGACCTAGAGGGTGATTTAGAAGATATCAGAGATGAATTTCGTGATGATTCTACTTCGTCTGAAAGATATTATTCAGATACAGAATTGGACTCACCAGATGTGGATACCCAAAGTAACCCATCCTGGCTTGAGAAGATACAAAAAACTGTTCGAAATGTCCTCAAAGCTGTTAATATATTCCAGTCTCCAGTGAACCAATCAGATGCTGCTAACGTGCGCAAGGAATATGATGAGTCTAGTGCCAAGCTATCAAAAATACAGTCAAGGATCTCAAGTTTATCACAGAAGCTAAAAAATGATTTTGGTCCAGAGAAGGAGTTCTATTCATTCTATGACCAATGTTTTGAAAGCAAGGAGAACAAATACGTTTACAAAATCTGTCCTTATAAACAAGCTTCGCAGGTTGAAGGGCACTCGACTACTCGTTTGGGGCGCTGGGATAAATTTGAGGACTCATATAGGGTTATGATCTTTTCGAGTGGGGATACGTGCTGGAATGGACCTGATAGAAGCTTAAAGGTCAAGCTAAGATGTGGGCTTAAAAATGACATAACCGATGTAGATGAACCAAGCCGTTGCGAGTACGTGGCATTGTTATCAACCCCAGCTGCTTGTGTAGAGGAAAAGCTTCAGGAACTGAAACACAAGTTGGACATGCTGAGTAAAGAAGAGGCAGAGAAGCATGATGAACTTTGA 1932 40.73 MKQWRGLNSESLATLWVLCTALALAPAPFVGSISSPKHQFRGISPQDEMYYKSSGMIKCRDGSNKFSKAQLNDNYCDCPDGTDEPGTSACPNGKFYCRNAGHVPLLLFSSRVNDDICDCCDGSDEYDSKVKCPNTCWETGKVARDKLKKKISTFEEGVKIRKQEVEQAKIAIIKDEAELLKLKDEEKVLKGLVEQLKERKEQIEKVEEEERLWKEKEEKKRLEREKDGTKKTESETTSVGESKTHEEDNWKKNEAIENYDKEYKQGEGNDDDKIGNWEDSTTDQQARMEEEVDSELEAQLSNKPETEASLLKEDTAVENDEPLAKSETGENAGTKESSEEVLRKNDASSELSREELGRLVASRWTGENTEEQSGNMDSTNDSDEESHDISKDTHENDGYASETDDDNQRYDDDLEGDLEDIRDEFRDDSTSSERYYSDTELDSPDVDTQSNPSWLEKIQKTVRNVLKAVNIFQSPVNQSDAANVRKEYDESSAKLSKIQSRISSLSQKLKNDFGPEKEFYSFYDQCFESKENKYVYKICPYKQASQVEGHSTTRLGRWDKFEDSYRVMIFSSGDTCWNGPDRSLKVKLRCGLKNDITDVDEPSRCEYVALLSTPAACVEEKLQELKHKLDMLSKEEAEKHDEL 643
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 38178571 38202221 + CcPI632755_02g025930.1 Cco02g2593 173350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco02g2593 643 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 21 626 IPR039794 GO:0006491(PANTHER)|GO:0017177(PANTHER)
Cco02g2593 643 MobiDBLite consensus disorder prediction 218 452 - -
Cco02g2593 643 SUPERFAMILY Mannose 6-phosphate receptor domain 524 617 IPR009011 -
Cco02g2593 643 Coils Coil 481 501 - -
Cco02g2593 643 Pfam Glucosidase II beta subunit-like 34 170 IPR028146 -
Cco02g2593 643 Pfam Glucosidase II beta subunit-like protein 485 643 IPR036607 -
Cco02g2593 643 MobiDBLite consensus disorder prediction 423 441 - -
Cco02g2593 643 MobiDBLite consensus disorder prediction 307 325 - -
Cco02g2593 643 Coils Coil 615 642 - -
Cco02g2593 643 Coils Coil 165 232 - -
Cco02g2593 643 Gene3D - 519 618 IPR009011 -
Cco02g2593 643 ProSiteProfiles MRH domain profile. 524 619 IPR044865 -
Cco02g2593 643 MobiDBLite consensus disorder prediction 332 357 - -
Cco02g2593 643 MobiDBLite consensus disorder prediction 218 300 - -
Cco02g2593 643 MobiDBLite consensus disorder prediction 406 422 - -
Cco02g2593 643 MobiDBLite consensus disorder prediction 380 405 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco02g0234 Cco-Chr2:2216805 Cco02g2593 Cco-Chr2:38178571 2.40E-24 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco02g2593 K08288 - csv:101221877 1092.8