Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco03g0035 ATGTCGACCACCCACAACCCCCAACTGGTCTGCGTCACCGGCGCCAGTGGCTGTATCGGATCCTGGCTCGTTCACCTCCTCCTCCTCCGCGGCTACTCCGTTCACGCCACCCTCCAAAATCTCAAGGACGAGAGCGAAACCAAGCATCTGGAAGATTTAGAAGGAGCAGACGCTCGTCTTCGTCTCTTCCAAATCGACCTCCTCGATTATGACTCCATTGTCCCCGCCGTCACTGGTTGTGCTGGCGTCTTCCACGTCGCGTCTCCTTGCATCGTTGATCCTGTACAAGATCCTGAGAGGGATTTATTGGATCCGGCTATCAAAGGAACCATCAATGTCCTGACGGCGGCCAAGGAGGCTGGGGTACAACGTGTAGTGGTGACTTCTTCTATCTCAGCCATGATTCCGAACCCTAACTGGCCGGCGAATGTTGTAAGGAATGAAGAATGTTGGACCGATATTGATTACTGCAAGAAAAAGGGGCTGTGGTATTCAATTTCAAAAACTCTAGCAGAAAAGGCTGCTTGGGATTTTGCTAAGGAGAAAGGATTGGATGTGGTGGTGATTAATCCAGGCACAGTGATGGGCCCTGTGTTTCCTCCCAGAATTAATGCCAGCATGCAAATGCTTTTAAAACTTCTTCAGGGGTGCAGTGAGACATTCGAGGACGTTTTTATCGGAGTAGTGCACTTTAAAGATGTTGCATTAGCACACATTTTGGTCTATGAAAACAAATCAGCTACAGGAAGGCACTTTTGTGCTGAGGCCATAGCTCGTTACTCTGACTATGTAGCGAAGGCTGCTGAACTCTTCCCTCAGTATAATGTGCCCAGATCGGTAGAAGATACACAGCCTGATTTGGTGAGAGCAAAAGATGGAGCCAAGAAGTTGATGAACCTGGGGCTGGAATTCATCCCAATGGAACAAATTCTCAAGGACGCCGTTGAGGATCTAAAAAAGAAGGGATATATTTCCTGA 978 48.67 MSTTHNPQLVCVTGASGCIGSWLVHLLLLRGYSVHATLQNLKDESETKHLEDLEGADARLRLFQIDLLDYDSIVPAVTGCAGVFHVASPCIVDPVQDPERDLLDPAIKGTINVLTAAKEAGVQRVVVTSSISAMIPNPNWPANVVRNEECWTDIDYCKKKGLWYSISKTLAEKAAWDFAKEKGLDVVVINPGTVMGPVFPPRINASMQMLLKLLQGCSETFEDVFIGVVHFKDVALAHILVYENKSATGRHFCAEAIARYSDYVAKAAELFPQYNVPRSVEDTQPDLVRAKDGAKKLMNLGLEFIPMEQILKDAVEDLKKKGYIS 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 346060 348549 + CcPI632755_03g000350.1 Cco03g0035 173394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco03g0035 325 CDD FR_SDR_e 10 302 - -
Cco03g0035 325 FunFam Cinnamoyl-CoA reductase 1 3 325 - -
Cco03g0035 325 Pfam NAD dependent epimerase/dehydratase family 10 251 IPR001509 -
Cco03g0035 325 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 10 316 IPR050425 GO:0016616(PANTHER)
Cco03g0035 325 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 319 IPR036291 -
Cco03g0035 325 Gene3D - 2 325 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco03g0035 Cco-Chr3:346060 Cco10g0726 Cco-Chr10:10559276 3.50E-91 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco03g0035 - - - 0.0