Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco03g0237 ATGGCGGCTGCAGCCGGTGGCAAGTCGCTCGAGCAAACGCCGACGTGGGCCGTTGCGGTTGTTTGCTTCGTTTTGCTTCTCATCTCTATTTTCATCGAATATAGCCTCCATCTCATCGGACATTGGCTGAAGAAGAGACACAAACGGGCGTTATTTGAAGCACTAGAGAAGATCAAATCAGAGCTTATGTTATTGGGATTCATATCACTGCTTCTAACAGTGGGGCAAGGTCCAATCACAGAGATATGTATCCCTCAACATGTAGCTGCCACGTGGCATCCATGTACAAAGGAGAAAGAAAGTGAGATGAACAAAATGGGGGATCAATCTGTGCAACATTTGTCTACTAATGGCCGGAGACTCCTCCATCTCGCCGGAAATGGTGGAAGTTTCCGGCGGATTTTGGCCGCGCCCGGAGGAGCCGACAAGTGTGCTGCCAAGGGTCAAGTGTCATTTATTTCAGCAGAAGGAATTCATCAACTTCATATCTTCATATTTGTGTTGGCTGTTTTCCATGTTTTGTACTGTGTTCTTACTTATGCTTTGGCTAGAGCAAAGATGAGGAGTTGGAAAACATGGGAAAAAGAGACCAAAACTGCAGAATACCAATTCTCACATGATCCGGAGAGATTTAGGTTTGCAAGAGACACCTCGTTTGGGAGAAGACATTTGAGCTTCTGGACAAAGAATCCTGCCCTAATGTGGATAGTTTGTTTCTTCAGGCAATTTGTAAGATCTGTTCCAAAAGTTGATTACTTGACATTAAGACATGGGTTTATAATGGCACATTTAGCACCTCAAAGTCATACACAATTTGATTTTCAAAAATACATTAATCGATCTCTTGAAGAGGACTTTAAAGTTGTTGTGGGAATCAGCCCACCAATTTGGTTCTTCGCTGTGCTGTTTCTCCTCTCAAACACTCACGGTTGGAGGGCATATCTATGGCTGCCATTCATCCCACTAATCATTTTGCTGCTGCTCGGGACAAAGTTGCAAGTGATCATAACGAAAATGGCACTAAGAATACAAGAAAGAGGAGAAGTAGTGAAGGGCGTGCCAGTGGTTGAGCCTGGCGATGACCTTTTTTGGTTCAATCGCCCTCGCCTTATTCTTTATCTCATCAACTTTGTTCTCTTTCAAAATGCCTTCCAAGTTGCCTTCTTTGCTTGGACTTGGTATGAGTTCGGGTTGAATTCTTGTTTCCATGAGCATACAGAGGATGTGGTGATCCGAATTTCAATGGGGGTGATTGTACAAATTCTTTGCAGTTATGTTACTCTTCCTCTTTATGCACTGGTCACTCAGATGGGTTCAACAATGAAGCCAACTATATTCAATGAGAGAGTGGCAGCGGCCCTTCGCAATTGGTACCACTCGGCTCGGAAGCACATCAAACACAACCGCGGTTCGATCACTCCAATGTCGAGCCGACCCGCCACCCCGACTCACAGCATGTCACCGGTCCACCTTCTCCGTCACTACAAGAGTGAGGTTGATAGCTTCCACACCTCGCCGAGAAGGTCACCATTTGACACTGATCGTTGGGACAACGATTCGCCCTCACCATCCCGTCATGCTGATGGTTCGTCTTCATCACAACCCCACATCGAAATGGGAGGCTATGACAAAGATCCGACCGAACCGGGGTCAACTCAAATTGACCCGGTTCAATCATCTCAAACCCGGACTCAACATGAGATTCAAATTGGCGGCCCCAAAGACTTTTCCTTTAATAGAGCAGAGTGA 1749 45.85 MAAAAGGKSLEQTPTWAVAVVCFVLLLISIFIEYSLHLIGHWLKKRHKRALFEALEKIKSELMLLGFISLLLTVGQGPITEICIPQHVAATWHPCTKEKESEMNKMGDQSVQHLSTNGRRLLHLAGNGGSFRRILAAPGGADKCAAKGQVSFISAEGIHQLHIFIFVLAVFHVLYCVLTYALARAKMRSWKTWEKETKTAEYQFSHDPERFRFARDTSFGRRHLSFWTKNPALMWIVCFFRQFVRSVPKVDYLTLRHGFIMAHLAPQSHTQFDFQKYINRSLEEDFKVVVGISPPIWFFAVLFLLSNTHGWRAYLWLPFIPLIILLLLGTKLQVIITKMALRIQERGEVVKGVPVVEPGDDLFWFNRPRLILYLINFVLFQNAFQVAFFAWTWYEFGLNSCFHEHTEDVVIRISMGVIVQILCSYVTLPLYALVTQMGSTMKPTIFNERVAAALRNWYHSARKHIKHNRGSITPMSSRPATPTHSMSPVHLLRHYKSEVDSFHTSPRRSPFDTDRWDNDSPSPSRHADGSSSSQPHIEMGGYDKDPTEPGSTQIDPVQSSQTRTQHEIQIGGPKDFSFNRAE 582
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2541930 2550830 - CcPI632755_03g002370.1 Cco03g0237 173596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco03g0237 582 MobiDBLite consensus disorder prediction 500 522 - -
Cco03g0237 582 MobiDBLite consensus disorder prediction 551 568 - -
Cco03g0237 582 MobiDBLite consensus disorder prediction 523 537 - -
Cco03g0237 582 MobiDBLite consensus disorder prediction 500 582 - -
Cco03g0237 582 Pfam Mlo family 8 495 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Cco03g0237 582 PANTHER MLO-LIKE PROTEIN 1 3 528 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco03g0237 Cco-Chr3:2541930 Cco04g1876 Cco-Chr4:33377143 1.40E-143 dispersed
Cco03g0237 Cco-Chr3:2541930 Cco03g0239 Cco-Chr3:2592180 3.00E-109 proximal
Cco05g2351 Cco-Chr5:32027397 Cco03g0237 Cco-Chr3:2541930 1.30E-189 transposed
Cco02g0029 Cco-Chr2:374512 Cco03g0237 Cco-Chr3:2541930 3.10E-63 transposed
Cco02g2253 Cco-Chr2:35108370 Cco03g0237 Cco-Chr3:2541930 1.80E-255 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco03g0237 K08472 - csv:101217225 1101.27