Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco03g0485 ATGTTTGGAGCACATGGTTTTGAAGATCATCATGAGGATCTACTACTGGAGATGACCCAGAAAAATTTTGAATGTGAACTGGAAAAATTTGGAGAAGATGAGTTCGAGAGTAGATCGGTGAACGACGCCATGGAAGCTCCTTTGGGAGAGGAACTTTGTGTTCTGAATCAGAGAAATAAGAGGAAGCGTTACCATCGCCATACTCAGCTTCAAATACAGGAAATGGAAGCGTTTTTTAAGGAGTGTCCACATCCGGATGACAAGCAAAGAAAGCAGCTGAGCCGTGAGTTAGGACTCGAACCCCTCCAGGTCAAGTTCTGGTTCCAAAACAAGCGCACACAAATCAAGGCTCAACAAGAACGGCATGAGAATGCAATATTGAAAGCTCAAAACGAGAAATTAAAAGCAGAGAACATGAGGTACAAAGAAGCTCTAAGCAATACAAGTTGCCCCAATTGTGGAGGTCCTGCTGCTCTTGGTGAAATGTCCTTTGATGCCCAACATTTGAGAATTGACAATGCACATCTAAGAGACGAGATAGAGAGATTAAACAGTAGTAGCAAATATAGTGGGAAGGCATGGGGTTCTCATTCTCATATGGTTCCATGTGGAGGGCAGCTTGATCATCTTGGGGTTGGAAGATCATCATTAAAGCCCCAACAAGCTGATCATTTGTTAGGGGAAATGTATGGAGGAGTGGGAGAGACAATGTTAAAAAAGTCTGTGACTACTGAAATTGATAAGCCAGTAATTGTTGAGCTTGCTGTTTCAGCCATGGAAGAAGTTTGTAGAATGGCTCAAGCAGGTGAGCCGTTGTGGGTTACTGGTGAAAACTCCATGGAAATGCTGAATGAAGATGAGTACTTGAGGACTTACTCTACACGAATTGGCCCTAGAATTGTGGGGCTTAGCTTTGAAGCTTCAAGGCAAACCTCCATTCTTGCTTTCAATCATTTAAAACTTGTCCATGTTCTCATGGACGTGAATCAATGGTCAACCATATTTTGTGGGATTGTTTCAAGAGCATTGACACTTGAAGTCTTATCAACCGGAGTTGTTGGCGACTATAATGGAGCTCTGCATGTCATGACGGCCGAGTTTCAAGTTCCTTCTCCCCTGGTTCCGACTCGAGAAAATTACTTCGTGAGATACTGCAAGCAGCAGGCAGACCGGAGTTGGGCGGTGGTCGATGTCTCGCTTGATTATTTACGCCCCACACCTACTTCAAGGACTCGAAGAAGACCATCCGGTTGCTTAATCCAAGAACTACCAAATGGTTGCTCAAAGGTGACTTGGGTGGAACATGTAGAAGTGGATGATCGAGCAGTACACAATTTGTACAAACGAGTGGTCTCATGTGGGCTTGCCTTTGGCGCAAAACGATGGATGGCTACTCTTGATCGACAGTGCCAACGCTTAACCAACTCCTCCTCTACCAACATTGCTGCACTAGACATTTGCGTGGTAACAGGGCAAGAGGGGAGGAAGAGCGTAATGAAGTTAGCAGAGAGAATGGTAAGGAGCTTCTGCAGTGGCGTTGGGGCTGCTACTGCACACAACTGGACTACATTATCCACCATTGATTCCGACGATGTTCGGGTCATGGCGAGAAAGAGCCTCGACGACCCTGGCCGACCTCCTGGAATTGTTCTCAATGCAGCAACTTCTTTCTGGATTCCAATTCCCCCTAACAGAGTCTTCCATTTCCTCCGAGATCAAAACACCCGCAATCAGTGGGATATACTTTCAAACGGTGGATTAGTCCAAGAAATGGCTCGCATTGGCAACGATCGAAACCCAGGAAACTGTGTCTCATTACTTCGTGTTAACAGTGCAAATTCAAGTCAGAGCAACATGTTAATACTACAAGAGAGCTGCAGCGACGACATCAGCGGTTCCTACATAATCTACGCCCCAGTGGACACCGTCGCCATGAACATGGTCTTGAGCGGCGGAGACCCTGATTACGTGGCTCTCTTGCCATCCGGATTCGCCATTCTCCCTGATGGGCCGCCCATTGGGGCTGATGGGCCTTCAGGAATTCTCGAATTCGGGTCCGGTGGTTCCTTGTTGACCGTTGCTTTTCAGATATTAGTGGATTCAGCTCCAACTGCCAAATTGTCTCTTGGGTCCGTGGCTACGGTTAACAGCCTCATCAAGTGCACGGTGGAGCGGATTAGAGCTGCACTCATGTGTGACCAACCCATGAATTAA 2214 46.61 MFGAHGFEDHHEDLLLEMTQKNFECELEKFGEDEFESRSVNDAMEAPLGEELCVLNQRNKRKRYHRHTQLQIQEMEAFFKECPHPDDKQRKQLSRELGLEPLQVKFWFQNKRTQIKAQQERHENAILKAQNEKLKAENMRYKEALSNTSCPNCGGPAALGEMSFDAQHLRIDNAHLRDEIERLNSSSKYSGKAWGSHSHMVPCGGQLDHLGVGRSSLKPQQADHLLGEMYGGVGETMLKKSVTTEIDKPVIVELAVSAMEEVCRMAQAGEPLWVTGENSMEMLNEDEYLRTYSTRIGPRIVGLSFEASRQTSILAFNHLKLVHVLMDVNQWSTIFCGIVSRALTLEVLSTGVVGDYNGALHVMTAEFQVPSPLVPTRENYFVRYCKQQADRSWAVVDVSLDYLRPTPTSRTRRRPSGCLIQELPNGCSKVTWVEHVEVDDRAVHNLYKRVVSCGLAFGAKRWMATLDRQCQRLTNSSSTNIAALDICVVTGQEGRKSVMKLAERMVRSFCSGVGAATAHNWTTLSTIDSDDVRVMARKSLDDPGRPPGIVLNAATSFWIPIPPNRVFHFLRDQNTRNQWDILSNGGLVQEMARIGNDRNPGNCVSLLRVNSANSSQSNMLILQESCSDDISGSYIIYAPVDTVAMNMVLSGGDPDYVALLPSGFAILPDGPPIGADGPSGILEFGSGGSLLTVAFQILVDSAPTAKLSLGSVATVNSLIKCTVERIRAALMCDQPMN 737
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5088180 5095989 - CcPI632755_03g004850.1 Cco03g0485 173844

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cco03g0485 737 ProSitePatterns 'Homeobox' domain signature. 93 116 IPR017970 GO:0000981(InterPro)|GO:0006355(InterPro)
Cco03g0485 737 SUPERFAMILY Bet v1-like 244 473 - -
Cco03g0485 737 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 55 732 IPR042160 -
Cco03g0485 737 SMART START_1 253 472 IPR002913 GO:0008289(InterPro)
Cco03g0485 737 SUPERFAMILY Homeodomain-like 48 119 IPR009057 -
Cco03g0485 737 CDD START_ArGLABRA2_like 248 471 - -
Cco03g0485 737 Coils Coil 166 186 - -
Cco03g0485 737 Pfam START domain 254 472 IPR002913 GO:0008289(InterPro)
Cco03g0485 737 SUPERFAMILY Bet v1-like 499 727 - -
Cco03g0485 737 FunFam Homeobox-leucine zipper protein GLABRA 2 253 471 - -
Cco03g0485 737 ProSiteProfiles START domain profile. 244 475 IPR002913 GO:0008289(InterPro)
Cco03g0485 737 FunFam Homeobox-leucine zipper protein HDG1 50 134 - -
Cco03g0485 737 SMART HOX_1 59 122 IPR001356 GO:0003677(InterPro)
Cco03g0485 737 Gene3D - 54 135 - -
Cco03g0485 737 Coils Coil 112 147 - -
Cco03g0485 737 ProSiteProfiles 'Homeobox' domain profile. 58 118 IPR001356 GO:0003677(InterPro)
Cco03g0485 737 CDD homeodomain 60 119 IPR001356 GO:0003677(InterPro)
Cco03g0485 737 Gene3D - 311 473 IPR023393 -
Cco03g0485 737 Pfam Homeodomain 61 116 IPR001356 GO:0003677(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco03g0485 K09338 - - csv:101212604 1343.56
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco03g0485 Cco-Chr3:5088180 Cco06g0006 Cco-Chr6:87865 2.00E-187 dispersed
Cco02g0186 Cco-Chr2:1784621 Cco03g0485 Cco-Chr3:5088180 5.50E-249 wgd
Cco03g0485 Cco-Chr3:5088180 Cco04g1995 Cco-Chr4:34122675 8.60E-255 wgd
Cco03g0485 Cco-Chr3:5088180 Cco05g1662 Cco-Chr5:23252715 5.10E-98 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi10g26 . . . . . . . . Cmo13g00750 . . Cma07g00302 . Car07g00253 . . Cpe10g00792 . . . . . . . Cla01g02157 Cam01g2268 Cec04g1921 Cco04g1995 Clacu01g2287 Cmu01g2156 Cre04g1828 . . . . Lsi01g00412 Csa06g03532 . . . . . . . . . . . . Cmo07g00291 Cma13g00725 . . . Cpe19g00972 Cpe20g00379 Bhi08g01784 . . . . . . Cla03g00460 Cam03g0488 Cec03g0473 Cco03g0485 Clacu03g0485 Cmu03g1092 Cre03g0778 Lsi02g00624 Csa01g01099 Chy02g00386 Cme12g01470
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cco06g0006 . 58 582 Homeobox Transcription Factor Family AT4G00730 65.5 8.6e-178 620.5
Cco05g0219 . 43 495 Homeobox Transcription Factor Family AT4G00730 58.4 8.4e-141 497.7
Cco05g0954 . 43 527 Homeobox Transcription Factor Family AT4G00730 55.2 8.7e-138 487.6
Cco10g1420 . 1 279 Homeobox Transcription Factor Family AT3G01470 53.3 2.8e-57 219.2
Cco09g2096 . 1 276 Homeobox Transcription Factor Family AT3G01470 53.0 7.1e-53 204.5
Cco07g1389 . 66 770 Homeobox Transcription Factor Family AT1G79840 58.3 1.5e-221 766.1
Cco09g0190 . 52 735 Homeobox Transcription Factor Family AT1G79840 52.5 7.2e-203 704.1
Cco05g2715 . 24 320 Homeobox Transcription Factor Family AT1G69780 65.7 1.6e-82 303.1
Cco04g2301 . 4 847 Homeobox Transcription Factor Family AT2G34710 79.0 0.0e+00 1349.7
Cco03g0821 . 4 837 Homeobox Transcription Factor Family AT2G34710 79.0 0.0e+00 1312.4
Cco02g2268 . 23 832 Homeobox Transcription Factor Family AT2G34710 67.9 0.0e+00 1104.7
Cco09g0011 . 3 837 Homeobox Transcription Factor Family AT2G34710 66.2 0.0e+00 1100.1
Cco01g1512 . 8 847 Homeobox Transcription Factor Family AT2G34710 65.2 4.8e-313 1070.5
Cco11g1561 . 1 842 Homeobox Transcription Factor Family AT2G34710 64.6 1.8e-312 1068.5
Cco09g0011 . 1 789 Homeobox Transcription Factor Family AT1G52150 85.6 0.0e+00 1353.2
Cco11g1561 . 7 794 Homeobox Transcription Factor Family AT1G52150 77.8 0.0e+00 1225.7
Cco04g2301 . 7 804 Homeobox Transcription Factor Family AT1G52150 66.8 5.4e-303 1036.9
Cco03g0821 . 14 796 Homeobox Transcription Factor Family AT1G52150 66.5 7.0e-295 1010.0
Cco02g2268 . 23 792 Homeobox Transcription Factor Family AT1G52150 67.5 1.6e-294 1008.8
Cco01g1512 . 18 798 Homeobox Transcription Factor Family AT1G52150 62.9 3.1e-274 941.4
Cco10g0249 . 1 278 Homeobox Transcription Factor Family AT4G16780 61.6 1.3e-81 300.1
Cco05g0052 . 6 287 Homeobox Transcription Factor Family AT4G16780 54.3 2.0e-66 249.6
Cco04g1550 . 58 228 Homeobox Transcription Factor Family AT4G16780 62.2 7.1e-48 188.0
Cco10g0785 . 10 247 Homeobox Transcription Factor Family AT4G16780 51.2 6.0e-47 184.9
Cco10g1745 . 182 328 Homeobox Transcription Factor Family AT4G16780 67.1 1.0e-46 184.1
Cco09g0363 . 157 280 Homeobox Transcription Factor Family AT4G16780 75.2 8.7e-46 181.0
Cco06g1583 . 147 263 Homeobox Transcription Factor Family AT4G16780 70.1 2.5e-40 162.9
Cco05g2006 . 74 226 Homeobox Transcription Factor Family AT4G16780 59.1 2.1e-39 159.8
Cco10g1254 . 152 269 Homeobox Transcription Factor Family AT4G16780 63.9 1.6e-36 150.2
Cco10g0249 . 25 243 Homeobox Transcription Factor Family AT2G44910 62.2 7.2e-65 244.6
Cco05g0052 . 45 257 Homeobox Transcription Factor Family AT2G44910 66.8 1.3e-61 233.8
Cco04g1550 . 70 235 Homeobox Transcription Factor Family AT2G44910 61.2 1.2e-48 190.7
Cco09g0363 . 165 289 Homeobox Transcription Factor Family AT2G44910 77.8 2.3e-47 186.4
Cco10g1745 . 197 329 Homeobox Transcription Factor Family AT2G44910 71.9 5.2e-47 185.3
Cco10g0785 . 46 252 Homeobox Transcription Factor Family AT2G44910 51.1 4.8e-45 178.7
Cco06g1583 . 147 272 Homeobox Transcription Factor Family AT2G44910 66.7 2.1e-40 163.3
Cco10g1254 . 150 268 Homeobox Transcription Factor Family AT2G44910 65.8 1.2e-38 157.5
Cco05g2006 . 74 226 Homeobox Transcription Factor Family AT2G44910 55.4 7.5e-38 154.8
Cco11g1561 . 18 842 Homeobox Transcription Factor Family AT4G32880 79.8 0.0e+00 1341.3
Cco09g0011 . 9 837 Homeobox Transcription Factor Family AT4G32880 78.7 0.0e+00 1319.7
Cco04g2301 . 14 847 Homeobox Transcription Factor Family AT4G32880 66.1 0.0e+00 1089.7
Cco03g0821 . 14 837 Homeobox Transcription Factor Family AT4G32880 64.7 9.3e-306 1046.2
Cco02g2268 . 14 819 Homeobox Transcription Factor Family AT4G32880 66.1 1.5e-300 1028.9
Cco01g1512 . 12 847 Homeobox Transcription Factor Family AT4G32880 62.0 5.5e-298 1020.4
Cco04g2301 . 7 847 Homeobox Transcription Factor Family AT1G30490 78.1 0.0e+00 1312.4
Cco03g0821 . 7 836 Homeobox Transcription Factor Family AT1G30490 78.0 0.0e+00 1265.0
Cco02g2268 . 5 832 Homeobox Transcription Factor Family AT1G30490 65.1 2.5e-311 1064.7
Cco09g0011 . 2 837 Homeobox Transcription Factor Family AT1G30490 63.6 4.2e-306 1047.3
Cco01g1512 . 5 847 Homeobox Transcription Factor Family AT1G30490 63.8 8.8e-304 1039.6
Cco11g1561 . 2 842 Homeobox Transcription Factor Family AT1G30490 62.0 7.5e-295 1010.0
Cco02g0929 . 39 756 Homeobox Transcription Factor Family AT4G21750 70.9 3.0e-295 1011.1
Cco02g0186 . 49 729 Homeobox Transcription Factor Family AT4G21750 72.0 1.3e-285 979.2
Cco04g1995 . 25 737 Homeobox Transcription Factor Family AT4G21750 67.0 3.4e-278 954.5
Cco03g0485 . 7 733 Homeobox Transcription Factor Family AT4G21750 67.2 3.3e-273 937.9
Cco06g0006 . 92 835 Homeobox Transcription Factor Family AT4G21750 54.4 4.5e-214 741.5
Cco05g0954 . 86 778 Homeobox Transcription Factor Family AT4G21750 51.8 1.4e-191 666.8
Cco02g1393 . 237 500 Homeobox Transcription Factor Family AT5G41410 55.6 1.7e-67 254.2
Cco04g1384 . 305 552 Homeobox Transcription Factor Family AT5G41410 51.3 3.9e-67 253.1
Cco11g0420 . 283 482 Homeobox Transcription Factor Family AT5G41410 54.9 8.7e-59 225.3
Cco02g2400 . 250 452 Homeobox Transcription Factor Family AT5G41410 54.6 1.6e-57 221.1
Cco03g0301 . 540 736 Homeobox Transcription Factor Family AT5G41410 52.3 6.2e-49 192.6
Cco02g1393 . 18 478 Homeobox Transcription Factor Family AT4G36870 50.3 5.5e-105 378.6
Cco01g0252 . 142 358 Homeobox Transcription Factor Family AT4G36870 56.0 1.5e-65 247.7
Cco03g0301 . 534 712 Homeobox Transcription Factor Family AT4G36870 56.4 3.4e-46 183.3
Cco10g1818 . 185 425 Homeobox Transcription Factor Family AT1G75410 51.4 5.5e-54 208.8
Cco02g2400 . 182 424 Homeobox Transcription Factor Family AT1G75410 52.5 6.1e-53 205.3
Cco03g0301 . 534 711 Homeobox Transcription Factor Family AT1G75410 50.6 5.4e-41 165.6
Cco02g1393 . 229 649 Homeobox Transcription Factor Family AT2G23760 61.6 3.9e-108 389.4
Cco04g1384 . 296 694 Homeobox Transcription Factor Family AT2G23760 59.2 8.0e-106 381.7
Cco02g2400 . 183 453 Homeobox Transcription Factor Family AT1G19700 54.9 9.9e-67 251.5
Cco04g1384 . 298 555 Homeobox Transcription Factor Family AT1G19700 51.9 2.7e-64 243.4
Cco01g0252 . 145 380 Homeobox Transcription Factor Family AT1G19700 50.6 4.9e-58 222.6
Cco10g0249 . 1 278 Homeobox Transcription Factor Family AT4G17460 57.0 6.8e-75 277.7
Cco05g0052 . 1 286 Homeobox Transcription Factor Family AT4G17460 52.6 1.1e-61 233.8
Cco04g1550 . 1 230 Homeobox Transcription Factor Family AT4G17460 52.2 6.6e-46 181.4
Cco09g0363 . 151 286 Homeobox Transcription Factor Family AT4G17460 71.6 2.8e-44 176.0
Cco10g1745 . 180 310 Homeobox Transcription Factor Family AT4G17460 71.2 6.9e-43 171.4
Cco06g1583 . 147 269 Homeobox Transcription Factor Family AT4G17460 64.2 1.6e-36 150.2
Cco10g0249 . 1 278 Homeobox Transcription Factor Family AT5G47370 59.0 1.1e-75 280.4
Cco05g0052 . 1 254 Homeobox Transcription Factor Family AT5G47370 58.0 1.5e-61 233.4
Cco09g0363 . 72 286 Homeobox Transcription Factor Family AT5G47370 52.7 9.3e-48 187.6
Cco04g1550 . 1 230 Homeobox Transcription Factor Family AT5G47370 51.6 4.6e-47 185.3
Cco10g1745 . 186 315 Homeobox Transcription Factor Family AT5G47370 72.5 2.8e-44 176.0
Cco10g0785 . 112 276 Homeobox Transcription Factor Family AT5G47370 60.9 6.9e-43 171.4
Cco06g1583 . 147 269 Homeobox Transcription Factor Family AT5G47370 65.9 4.3e-37 152.1
Cco04g1550 . 1 264 Homeobox Transcription Factor Family AT4G37790 62.8 4.6e-84 308.1
Cco10g0785 . 1 276 Homeobox Transcription Factor Family AT4G37790 57.8 1.0e-75 280.4
Cco05g2006 . 1 266 Homeobox Transcription Factor Family AT4G37790 52.1 3.1e-56 215.7
Cco10g1745 . 176 340 Homeobox Transcription Factor Family AT4G37790 66.3 1.6e-52 203.4
Cco10g0249 . 4 228 Homeobox Transcription Factor Family AT4G37790 50.4 4.4e-50 195.3
Cco09g0363 . 152 279 Homeobox Transcription Factor Family AT4G37790 74.8 1.8e-48 189.9
Cco05g0052 . 140 254 Homeobox Transcription Factor Family AT4G37790 76.5 3.6e-44 175.6
Cco06g1583 . 147 262 Homeobox Transcription Factor Family AT4G37790 73.3 9.8e-42 167.5
Cco10g1254 . 149 264 Homeobox Transcription Factor Family AT4G37790 70.7 2.8e-41 166.0
Cco05g0052 . 1 293 Homeobox Transcription Factor Family AT3G60390 55.7 1.5e-70 263.5
Cco10g0249 . 2 235 Homeobox Transcription Factor Family AT3G60390 58.5 1.3e-69 260.4
Cco09g0363 . 165 289 Homeobox Transcription Factor Family AT3G60390 78.6 3.5e-48 189.1
Cco04g1550 . 70 228 Homeobox Transcription Factor Family AT3G60390 64.2 1.8e-47 186.8
Cco10g1745 . 184 321 Homeobox Transcription Factor Family AT3G60390 70.5 1.8e-47 186.8
Cco10g0785 . 99 247 Homeobox Transcription Factor Family AT3G60390 66.5 1.9e-46 183.3
Cco06g1583 . 147 272 Homeobox Transcription Factor Family AT3G60390 66.7 1.9e-41 166.8
Cco10g1254 . 152 271 Homeobox Transcription Factor Family AT3G60390 66.1 8.8e-39 157.9
Cco05g2006 . 74 226 Homeobox Transcription Factor Family AT3G60390 54.3 3.3e-38 156.0
Cco04g1550 . 1 264 Homeobox Transcription Factor Family AT2G22800 60.4 1.5e-74 276.6
Cco10g0785 . 1 276 Homeobox Transcription Factor Family AT2G22800 55.5 9.9e-71 263.8
Cco05g2006 . 1 266 Homeobox Transcription Factor Family AT2G22800 51.9 1.7e-59 226.5
Cco10g0249 . 4 228 Homeobox Transcription Factor Family AT2G22800 52.3 3.1e-48 189.1
Cco10g1745 . 181 309 Homeobox Transcription Factor Family AT2G22800 71.3 6.9e-48 188.0
Cco09g0363 . 159 279 Homeobox Transcription Factor Family AT2G22800 76.2 4.5e-47 185.3
Cco05g0052 . 140 254 Homeobox Transcription Factor Family AT2G22800 73.0 1.9e-42 169.9
Cco10g1254 . 149 264 Homeobox Transcription Factor Family AT2G22800 69.8 1.4e-40 163.7
Cco06g1583 . 144 262 Homeobox Transcription Factor Family AT2G22800 70.6 3.4e-39 159.1
Cco06g0006 . 1 836 Homeobox Transcription Factor Family AT3G61150 63.2 1.1e-276 949.5
Cco05g0219 . 47 738 Homeobox Transcription Factor Family AT3G61150 60.4 2.2e-235 812.4
Cco05g0954 . 55 779 Homeobox Transcription Factor Family AT3G61150 58.7 2.3e-232 802.4
Cco02g0186 . 62 738 Homeobox Transcription Factor Family AT3G61150 51.8 2.9e-195 679.1
Cco02g0929 . 62 755 Homeobox Transcription Factor Family AT3G61150 50.3 8.4e-195 677.6
Cco05g2007 . 59 327 Homeobox Transcription Factor Family AT4G08150 79.5 5.2e-121 431.4
Cco08g1861 . 77 323 Homeobox Transcription Factor Family AT4G08150 68.8 8.6e-92 334.3
Cco04g1953 . 196 446 Homeobox Transcription Factor Family AT4G08150 56.8 1.1e-75 280.8
Cco02g0232 . 82 326 Homeobox Transcription Factor Family AT4G08150 57.5 1.7e-71 266.9
Cco05g2818 . 79 315 Homeobox Transcription Factor Family AT4G08150 55.3 3.5e-69 259.2
Cco08g1957 . 116 234 Homeobox Transcription Factor Family AT4G08150 61.3 5.5e-38 155.6
Cco05g2818 . 1 313 Homeobox Transcription Factor Family AT1G70510 61.4 3.8e-103 371.7
Cco05g2007 . 64 302 Homeobox Transcription Factor Family AT1G70510 50.6 2.7e-64 242.7
Cco08g1861 . 77 295 Homeobox Transcription Factor Family AT1G70510 50.7 1.3e-55 213.8
Cco08g1957 . 103 231 Homeobox Transcription Factor Family AT1G70510 63.1 2.4e-44 176.4
Cco05g1891 . 230 558 Homeobox Transcription Factor Family AT5G25220 79.9 2.0e-139 492.7
Cco08g1527 . 177 456 Homeobox Transcription Factor Family AT5G25220 83.9 1.9e-134 476.1
Cco01g0332 . 24 300 Homeobox Transcription Factor Family AT5G25220 69.4 7.9e-104 374.4
Cco05g1891 . 271 565 Homeobox Transcription Factor Family AT5G11060 82.8 2.1e-135 479.2
Cco08g1527 . 181 455 Homeobox Transcription Factor Family AT5G11060 80.6 7.4e-128 454.1
Cco01g0332 . 32 299 Homeobox Transcription Factor Family AT5G11060 69.0 2.0e-101 366.3
Cco05g1891 . 267 543 Homeobox Transcription Factor Family AT4G32040 73.8 8.4e-113 404.1
Cco08g1527 . 167 441 Homeobox Transcription Factor Family AT4G32040 73.3 7.1e-112 401.0
Cco01g0332 . 25 285 Homeobox Transcription Factor Family AT4G32040 63.6 2.6e-90 329.3
Cco05g2818 . 1 316 Homeobox Transcription Factor Family AT1G23380 67.9 2.9e-117 418.7
Cco05g2007 . 62 302 Homeobox Transcription Factor Family AT1G23380 54.9 2.9e-69 259.2
Cco04g1953 . 196 433 Homeobox Transcription Factor Family AT1G23380 50.4 2.3e-66 249.6
Cco08g1861 . 77 295 Homeobox Transcription Factor Family AT1G23380 52.1 1.4e-58 223.8
Cco08g1957 . 101 231 Homeobox Transcription Factor Family AT1G23380 63.6 7.0e-47 184.9
Cco08g1958 . 3 177 Homeobox Transcription Factor Family AT1G23380 54.1 3.5e-46 182.6
Cco01g0332 . 1 299 Homeobox Transcription Factor Family AT1G62990 78.6 2.5e-128 455.3
Cco05g1891 . 280 557 Homeobox Transcription Factor Family AT1G62990 65.5 3.5e-98 355.1
Cco08g1527 . 178 455 Homeobox Transcription Factor Family AT1G62990 65.1 1.0e-97 353.6
Cco05g2715 . 24 320 Homeobox Transcription Factor Family AT1G26960 57.4 4.9e-64 241.5
Cco09g2039 . 1 296 Homeobox Transcription Factor Family AT3G01220 52.1 5.3e-51 198.4
Cco01g1859 . 1 704 Homeobox Transcription Factor Family AT1G17920 61.6 4.3e-232 801.2
Cco01g1859 . 19 701 Homeobox Transcription Factor Family AT1G73360 64.9 2.0e-248 855.5
Cco05g1240 . 28 703 Homeobox Transcription Factor Family AT1G73360 51.6 8.1e-189 657.5
Cco07g0723 . 33 185 Homeobox Transcription Factor Family AT1G70920 62.4 4.3e-43 171.4
Cco01g0634 . 30 194 Homeobox Transcription Factor Family AT1G70920 58.2 7.3e-43 170.6
Cco02g0929 . 61 756 Homeobox Transcription Factor Family AT1G05230 82.8 0.0e+00 1104.4
Cco02g0186 . 49 738 Homeobox Transcription Factor Family AT1G05230 76.3 2.1e-301 1031.6
Cco04g1995 . 44 740 Homeobox Transcription Factor Family AT1G05230 64.1 5.3e-249 857.4
Cco03g0485 . 59 733 Homeobox Transcription Factor Family AT1G05230 64.8 5.0e-247 850.9
Cco06g0006 . 110 836 Homeobox Transcription Factor Family AT1G05230 55.9 2.1e-213 739.2
Cco05g0219 . 84 739 Homeobox Transcription Factor Family AT1G05230 51.1 3.5e-176 615.5
Cco07g0966 . 1 150 Homeobox Transcription Factor Family AT2G18550 56.1 3.4e-37 152.1
Cco02g0929 . 83 756 Homeobox Transcription Factor Family AT2G32370 56.3 5.0e-207 718.0
Cco02g0186 . 67 731 Homeobox Transcription Factor Family AT2G32370 53.2 4.4e-195 678.3
Cco06g0006 . 104 833 Homeobox Transcription Factor Family AT5G52170 51.6 4.8e-199 691.4
Cco05g0954 . 33 780 Homeobox Transcription Factor Family AT5G52170 51.7 1.4e-198 689.9
Cco05g0219 . 83 740 Homeobox Transcription Factor Family AT5G52170 51.4 4.6e-178 621.7
Cco04g1694 . 61 214 Homeobox Transcription Factor Family AT5G66700 54.5 5.9e-37 151.4
Cco09g1176 . 3 780 Homeobox Transcription Factor Family AT5G46880 59.6 2.7e-249 858.6
Cco10g1818 . 184 454 Homeobox Transcription Factor Family AT2G16400 57.9 5.6e-77 285.4
Cco02g2400 . 181 456 Homeobox Transcription Factor Family AT2G16400 56.3 2.0e-74 276.9
Cco02g1393 . 230 500 Homeobox Transcription Factor Family AT2G16400 51.3 3.4e-66 249.6
Cco04g1384 . 298 553 Homeobox Transcription Factor Family AT2G16400 51.7 1.4e-64 244.2
Cco02g2400 . 168 452 Homeobox Transcription Factor Family AT2G27220 51.0 8.8e-66 248.1
Cco09g0266 . 194 455 Homeobox Transcription Factor Family AT2G35940 52.2 2.0e-64 244.2
Cco04g1384 . 289 557 Homeobox Transcription Factor Family AT2G35940 50.7 4.5e-64 243.0
Cco01g0252 . 194 384 Homeobox Transcription Factor Family AT2G35940 63.6 7.6e-64 242.3
Cco10g2138 . 165 329 Homeobox Transcription Factor Family AT2G35940 54.0 6.9e-49 192.6
Cco04g0963 . 171 344 Homeobox Transcription Factor Family AT2G35940 51.3 7.2e-46 182.6
Cco01g0252 . 218 385 Homeobox Transcription Factor Family AT4G34610 62.5 7.3e-54 208.8
Cco03g0301 . 563 731 Homeobox Transcription Factor Family AT4G34610 61.5 2.0e-51 200.7
Cco04g0963 . 189 334 Homeobox Transcription Factor Family AT4G34610 54.8 1.2e-40 164.9
Cco02g0929 . 38 754 Homeobox Transcription Factor Family AT4G04890 73.4 6.1e-301 1030.0
Cco02g0186 . 56 729 Homeobox Transcription Factor Family AT4G04890 74.8 1.4e-289 992.3
Cco04g1995 . 25 737 Homeobox Transcription Factor Family AT4G04890 68.7 2.3e-279 958.4
Cco03g0485 . 1 733 Homeobox Transcription Factor Family AT4G04890 67.0 1.7e-274 942.2
Cco06g0006 . 104 835 Homeobox Transcription Factor Family AT4G04890 55.3 6.5e-218 754.2
Cco05g0954 . 55 778 Homeobox Transcription Factor Family AT4G04890 51.6 3.4e-198 688.7
Cco01g1859 . 7 702 Homeobox Transcription Factor Family AT4G04890 50.8 1.0e-183 640.6
Cco05g0219 . 76 738 Homeobox Transcription Factor Family AT4G04890 50.5 3.4e-182 635.6
Cco06g1558 . 140 571 Homeobox Transcription Factor Family AT4G29940 59.5 2.8e-139 493.0
Cco02g2268 . 1 819 Homeobox Transcription Factor Family AT5G60690 82.4 0.0e+00 1352.0
Cco01g1512 . 1 847 Homeobox Transcription Factor Family AT5G60690 76.4 0.0e+00 1271.5
Cco04g2301 . 1 847 Homeobox Transcription Factor Family AT5G60690 69.0 0.0e+00 1133.6
Cco03g0821 . 1 836 Homeobox Transcription Factor Family AT5G60690 67.6 0.0e+00 1104.7
Cco09g0011 . 9 837 Homeobox Transcription Factor Family AT5G60690 65.6 8.0e-313 1069.7
Cco11g1561 . 20 842 Homeobox Transcription Factor Family AT5G60690 63.1 1.0e-299 1026.2
Cco04g1953 . 196 449 Homeobox Transcription Factor Family AT1G62360 81.7 3.1e-115 412.1
Cco02g0232 . 90 341 Homeobox Transcription Factor Family AT1G62360 71.3 1.7e-100 363.2
Cco05g2007 . 66 306 Homeobox Transcription Factor Family AT1G62360 60.6 3.7e-76 282.3
Cco05g2818 . 82 314 Homeobox Transcription Factor Family AT1G62360 54.0 3.6e-63 239.2
Cco08g1861 . 77 316 Homeobox Transcription Factor Family AT1G62360 52.7 9.2e-59 224.6
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000325 5 8 4 2 5 4 7 4 4 4 4 4 7 4 4 6 4 4 6 4 4 4 4 4 4 5 4 9 4 2 138
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58911 PF01852 START 3.70E-48 CL0209 Cco TF