Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco03g0753 | ATGGCGGCCTCAACAATGGCTCTGTCCTCGCCCTCACTCGCCGGAAAGGCGGTGAAACTTACGCCCTCCTCCCCTGAGCTTCTCGGCAATGGCAGAGTCAGTATGAGGAAATCCGCTGCCAAGCCTGTTTCTTCTGGAAGCCCATGGTACGGACCCGACCGTGTTAAGTATTTGGGGCCATTCTCCGGCGAGCCTCCGTCCTACCTCACCGGAGAATTCCCCGGTGACTATGGCTGGGATACTGCCGGACTTTCCGCAGACCCTGAGACCTTCGCTAAGAACCGTGAGCTTGAAGTCATCCACTCTAGGTGGGCCATGCTCGGAGCGTTGGGCTGCGTGTTCCCGGAGCTTCTTTCCCGCAACGGCGTGAAGTTTGGAGAAGCAGTGTGGTTCAAGGCGGGTTCACAAATCTTCAGCGAAGGTGGGCTGGACTACTTAGGGAACCCGAGCTTGATCCACGCCCAAAGCATTCTAGCCATTTGGGCCTCTCAGGTGGTTCTCATGGGGGCAGTCGAGGGATACCGTATCGCCGGTGGCCCACTTGGGGAAGTGACCGACCCGATTTACCCGGGTGGGAGCTTTGACCCGTTGGGGCTTGCAGATGACCCGGAAGCCTTTGCAGAGCTGAAAGTGAAGGAGCTGAAGAATGGAAGATTGGCGATGTTCTCTATGTTTGGATTCTTCGTTCAAGCCATCGTCACCGGAAAGGGCCCACTTGAGAATCTTGCCGACCACCTTGCTGACCCAGTCAACAACAATGCTTGGGCCTATGCTACCAACTTTGTTCCTGGAAAATGA | 798 | 56.27 | MAASTMALSSPSLAGKAVKLTPSSPELLGNGRVSMRKSAAKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK | 265 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 7801593 | 7803777 | - | CcPI632755_03g007530.1 | Cco03g0753 | 174112 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco03g0753 | 265 | Pfam | Chlorophyll A-B binding protein | 65 | 232 | IPR022796 | - | |
Cco03g0753 | 265 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 4 | 265 | IPR001344 | GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0009941(PANTHER)|GO:0010287(PANTHER)|GO:0016020(InterPro) | |
Cco03g0753 | 265 | FunFam | Chlorophyll a-b binding protein, chloroplastic | 56 | 258 | - | - | |
Cco03g0753 | 265 | Gene3D | Chlorophyll a/b binding protein domain | 56 | 258 | - | - | |
Cco03g0753 | 265 | SUPERFAMILY | Chlorophyll a-b binding protein | 48 | 262 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco02g1970 | Cco-Chr2:32643188 | Cco03g0753 | Cco-Chr3:7801593 | 3.40E-145 | dispersed | |
Cco03g0753 | Cco-Chr3:7801593 | Cco04g2218 | Cco-Chr4:35799355 | 8.70E-149 | dispersed | |
Cco03g0753 | Cco-Chr3:7801593 | Cco03g0754 | Cco-Chr3:7807338 | 1.10E-13 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco03g0753 | K08912 | - | rcu:8289767 | 526.554 |