Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco03g0818 | ATGGATAATGGTGATATTGAGAGCGGGGAAGAGGAATTTCATGGGCAGAGGGGTAGGAAGTATCGCCCTGTCGAAGCCCATGATCGTGCTGTTCTTGAAATGTCTTCCATGGATCCGGGTTCCTCATCTTCTTCCTCCTCCATTCCCCCCTTGCGCCAACCTTCTCTCAAGAAGGTAAAAGTGGGTTCTCAGACCGGCACTGAAAAAGAAGGGAATTCTCCTACTCGTATTGAAGTCAATGGCCCTCAGCGAGAATCCAAACTGGAGTTTTTTGGTTTTGATTCTCTTGTTAATATTCTTGGCCTTAAGAGTATGATGGGCGAACAAATTCAAGCACCTTCTAGTCCTCGAGATGGTGAGAATGTTTCTATCACTCAGGGGTTGCCAAAGACCAATGAAGTCAAATCGGGTACATTGATGGGTGTATTTATCCCATGCTTGCAGAACATATTGGGAATCATTTACTATATTCGATTTTCTTGGATTGTTGGCATGGCTGGCATTGGTGAGTCATTAGTGCTGGTGGCGTTTTGTGGTTTATGTACGTTCTTGACTTCAATTTCACTAAGTGCTATTGCAACTAATGGAGCTATGAAGGGTGGGGGTCCATATTATCTGATAGGTCGTGCCCTTGGTCCAGAGGTTGGAGTTAGCATTGGGCTATGTTTCTTTCTTGGAAATGCAGTTGCTGGTGCGCTTTATGTGTTGGGAGCTGTGGAAACATTTTTGAATGCTGTCCCAGCTGCAGGGATTTTCAGAGAGACTGTAACAAAAGTTAACGGAACAACTGTTGCAGAGCCAATACAAAGCCCAAGTTCACATGACTTGCAAGTTTATGGCATTATTGTGACGATTCTTCTGTGCTTCATTGTGTTTGGTGGTGTGAAAATGATTAATAGGGTTGCTCCTGCTTTCCTTATTCCAGTCTTGTTCTCAGTACTTTGCATATTTCTTGGAATTTTTCTGGCAAGGAAAAACGACCCAGCAGAGGGCGTCACAGGTTTGAGTTTGGAATCTTTTAAAGAAAATTGGAGTTCTGATTATCAGATGACTAATAGTGCTGGAATTCCTGATCCTTTTGGAAAAGTATACTGGAATTTCAATGCTTTGGTTGGTCTTTTTTTCCCTGCTGTGACGGGAATAATGGCTGGTTCTAATAGATCGGCTTCACTGAAGGATACTCAGCGTTCAATTCCTATTGGAACATTGGCTGCAACTCTAACAACAACTGCATTGTATCTGATCTCTGTTTTGCTGTTTGGAGCACTGGCAACCAGAGAGAAATTGTTGACAGATAGGCTTCTTACTGCTACGGTTGCTTGGCCTTTCCCAGCAATTATTTACGTTGGAATTATTTTATCAACCCTTGGAGCTGCCCTTCAGAGCCTGACAGGAGCCCCTCGCTTACTAGCAGCCATAGCCAATGATGATATATTGCCTATTCTAAACTATTTTAAAGTAGCAGATGGCAGTGAGCCATACTTTGCAACCCTCTTTACTGCATTTCTCTGCATTGGATGTGTCATTATTGGGAATCTTGATCTTATCACACCAACTGTAACCATGTTTTTCCTACTGTGTTATGCTGGTGTGAACTTATCCTGCTTCCTTTTGGATCTACTAGACGCTCCCAGTTGGCGTCCACGCTGGAGATTCCACCACTGGAGCCTTTCTCTTCTTGGAGCATCACTTTGTGTAGTGATAATGTTCTTGATCTCGTGGTCATTCACGATAGTGTCTCTAGCCCTTGCAAGCCTTATATATTATTATGTGTGCCTTAGAGGCAAGGCTGGAGACTGGGGTGATGGTTTCAAGAGTGCATATTTCCAACTTGCTCTCCGTAGTCTTCGTTCGCTTGGAGCGAGCCAAGTCCACCCAAAGAACTGGTATCCCATTCCCTTGATATTTTGCCGGCCATGGGGAAAACTGCCCGAAAATGTACCATGTCACCCTAAACTTGCAGACTTTGCAAACTGCATGAAGAAAAAAGGCCGGGGAATGTCCATATTTGTCTCTATACTAGATGGAGACTACCATGAACGGGTTGAAGATGCAAAAGCTGCCTGCAAGCAGCTTGCTACATATATCGATTACAAACGTTGTGAAGGTGTGGCAGAGATTGTTGTGGCTCCAACAATGTCTGAAGGTTTCCGGGGGATCGTTCAGACGATGGGTCTTGGAAATCTCAAGCCGAATATTGTAGTCATGCGATACCCTGAAATATGGCGTCGTGAAAACCTAATAGAAATTCCAGCTACTTTTGTTGGAATAATCAATGACTGCATTGATGCCAACAAGGCAGTTGTCATTGTTAAGGGTCTGGATGAATGGCCTAATGAATTTCAAAGGCAATATGGAACTATAGACTTGTATTGGATTGTGAGAGATGGTGGTCTTATGCTTCTCCTCTCTCAGCTTCTCCTTACAAAGGAGAGCTTTGAGAGTTGTAAGATTCAGGTGTTCTGCATTGCAGAGGAGGATTCTGACGCGGAGGGCCTCAAAGCTGATGTCAAAAAGTTTTTGTATGATCTTCGGATGCAAGCTGAGGTGATTGTTATAACAATAAAATCATGGGACACACAAGTGGAGGGCGCGCAACCAGACGAATCAATGGAAGCCTTCAGCGCTGCTCAAGGGAGGATTGCTAGTTATTTAAGTGAAATGAAGGCAACAGCTGAGAGCAGAGGAACCACACTCATGGCTGATGGGAAGCCTGTGAGTGTGAATGAGCAGCAGGTTGAGAAGTTTCTAAATACAACTCTCAAGTTGAACTCAACGATTCTGAGATACTCCAGGATGGCTGCGGTTGTGCTCGTCAGCCTCCCGCCACCCCCTGTCAACCATCCTGCTTACTTCTATATGGAGTACTTGGATTTGTTGGTTGAGAATGTGCCTAGGCTCTTGATCGTAAGAGGATACCGACGAGATGTCGTAACTTTGTTCACCTAG | 2949 | 44.29 | MDNGDIESGEEEFHGQRGRKYRPVEAHDRAVLEMSSMDPGSSSSSSSIPPLRQPSLKKVKVGSQTGTEKEGNSPTRIEVNGPQRESKLEFFGFDSLVNILGLKSMMGEQIQAPSSPRDGENVSITQGLPKTNEVKSGTLMGVFIPCLQNILGIIYYIRFSWIVGMAGIGESLVLVAFCGLCTFLTSISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGALYVLGAVETFLNAVPAAGIFRETVTKVNGTTVAEPIQSPSSHDLQVYGIIVTILLCFIVFGGVKMINRVAPAFLIPVLFSVLCIFLGIFLARKNDPAEGVTGLSLESFKENWSSDYQMTNSAGIPDPFGKVYWNFNALVGLFFPAVTGIMAGSNRSASLKDTQRSIPIGTLAATLTTTALYLISVLLFGALATREKLLTDRLLTATVAWPFPAIIYVGIILSTLGAALQSLTGAPRLLAAIANDDILPILNYFKVADGSEPYFATLFTAFLCIGCVIIGNLDLITPTVTMFFLLCYAGVNLSCFLLDLLDAPSWRPRWRFHHWSLSLLGASLCVVIMFLISWSFTIVSLALASLIYYYVCLRGKAGDWGDGFKSAYFQLALRSLRSLGASQVHPKNWYPIPLIFCRPWGKLPENVPCHPKLADFANCMKKKGRGMSIFVSILDGDYHERVEDAKAACKQLATYIDYKRCEGVAEIVVAPTMSEGFRGIVQTMGLGNLKPNIVVMRYPEIWRRENLIEIPATFVGIINDCIDANKAVVIVKGLDEWPNEFQRQYGTIDLYWIVRDGGLMLLLSQLLLTKESFESCKIQVFCIAEEDSDAEGLKADVKKFLYDLRMQAEVIVITIKSWDTQVEGAQPDESMEAFSAAQGRIASYLSEMKATAESRGTTLMADGKPVSVNEQQVEKFLNTTLKLNSTILRYSRMAAVVLVSLPPPPVNHPAYFYMEYLDLLVENVPRLLIVRGYRRDVVTLFT | 982 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 8923200 | 8936041 | + | CcPI632755_03g008180.1 | Cco03g0818 | 174177 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco03g0818 | 982 | Gene3D | Amino acid/polyamine transporter I | 134 | 599 | - | - | |
Cco03g0818 | 982 | MobiDBLite | consensus disorder prediction | 8 | 32 | - | - | |
Cco03g0818 | 982 | MobiDBLite | consensus disorder prediction | 1 | 81 | - | - | |
Cco03g0818 | 982 | FunFam | Cation-chloride cotransporter 1 | 135 | 599 | - | - | |
Cco03g0818 | 982 | MobiDBLite | consensus disorder prediction | 36 | 80 | - | - | |
Cco03g0818 | 982 | NCBIfam | K-Cl cotransporter | 68 | 982 | IPR004842 | GO:0006811(InterPro)|GO:0015377(InterPro)|GO:0016020(InterPro) | |
Cco03g0818 | 982 | PANTHER | SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS | 97 | 981 | IPR004842 | GO:0006811(InterPro)|GO:0006884(PANTHER)|GO:0015377(InterPro)|GO:0015379(PANTHER)|GO:0016020(InterPro)|GO:0055064(PANTHER)|GO:0055075(PANTHER)|GO:1902476(PANTHER)|GO:1990573(PANTHER) | |
Cco03g0818 | 982 | Pfam | Solute carrier family 12 | 781 | 981 | IPR018491 | GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0022857(InterPro) | |
Cco03g0818 | 982 | Pfam | Solute carrier family 12 | 651 | 772 | IPR018491 | GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0022857(InterPro) | |
Cco03g0818 | 982 | Pfam | Amino acid permease | 141 | 609 | IPR004841 | GO:0016020(InterPro)|GO:0055085(InterPro) |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco03g0818 | K14427 | - | csv:101216218 | 1858.57 |