Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cco03g0925 ATGCCTCGGGTCACATATCCTGCTCGGAAACTGAGTCCGAGAACAAGTGATATGGCCGATGGAGAAGAACAGCAGGGTGAATGCTGGGGTGGCTCCACTGGGGCATCGGGTTTTGACTTGGGCAACAAAAGTTTTGGCATTGCAGATGTACGTTCGACGTCGATTGTAATTGTACAGAGTAAGATTTTTAGGAGTATTAGCCATTGTGTGTACGAGAAGTTGGGGAGAGGGGGAAAGGAAAGAGTTGCTGCTGTGAAGGTTTTTATTAGCTTCAACGCTTGCCAGGAACAAGATGAGGCCCAGGCCTCTGCTGCCTACGACGGTTTCCGAGCTCTGCCTCTGCATACGAAGCCCCAAGCCGCGATGGGCTCCATAGACGTCCAATCAACCAACGCTGAAAATGGATCCGCCGCCGCCTCTGCTGATGGTCGTCAAAAGCCAGTTCCCGCCGACGGTTTGAACCAGACATCTAACGAGCCAGACGGAACGGCGCCTGAGAAGCCTAAGGAATTGGGGCCGACGAAGAAGCGTATGTCCTCCATGCTTCCTCTAGATGTCGGCACCCGCGTCATGTGCCGCTGGAGGGACGGGAAGTACCATCCCGTTAAGGTCATCGAGCGTCGGAAGTTGCAGGCAACTGGTTTTAGTGACTACGAATACTATGTCCATTACACCGAGTTCAATAGGAGACTTGATGAGTGGGTGAAGCTTGACCAACTTGATCTTGATTCAGTTGAGACGGTTGTTGATGAGAAAGTGGAGGACAAGGTAACAGGGTTGAAGATGACCCGACACCAGAAGCGGAAGATTGATGAAACCCATGTTGAGGGTCATGAGGAACTTGATGCTGCCAGCTTGAGGGAGCATGAAGAATTTACGAAAGTGAAAAATATTGCAACAATTGAACTTGGAAGATACGAGATTGAGACATGGTATTTCTCCCCCTTTCCACCAGAGTACAATGACACTACAAAGCTCTATTTTTGTGAGTTTTGTCTCAATTTCATGAAGCGCAAAGAACAGCTCCAGAGACATATGAGGAAGTGTGATCTGAAGCATCCTCCTGGTGATGAAATTTATCGATGTGGTACTTTATCAATGTTTGAGGTTGATGGAAAAAAGAACAAGGTTTATGGGCAGAATCTCTGTTACCTAGCAAAGTTATTTCTGGACCACAAGACTCTCTACTATGATGTCGACCTTTTTCTGTTTTATGTCCTGTGCGAGTGTGATGATCGAGGGTGTCACATGGTTGGATATTTTTCAAAGGAAAAGCATTCAGAGGAATCCTATAATTTGGCATGCATTCTCACCCTTCCTCCTTATCAAAGGAAGGGCTACGGCAAGTTCTTAATAGCTTTTTCTTATGAACTCTCCAAGAAGGAAGGTAAAGTTGGCACTCCTGAAAGACCTCTTTCAGACCTTGGGTTGGTGAGCTACAGAGGATACTGGACCAGAGTTCTTTTAGACATCTTGAAAAAGCACAAGGCCAATATCTCTATCAAGGAGCTAAGTGACATGACAGCTATCAAAGCCGAAGATATTTTGAACACACTTCAGAGCCTGGAGTTGATTCAATACAGGAAAGGGCAGCATGTTATATGTGCTGACCCGAAGGTGCTGGATCGTCATCTCAAAGCTGCTGGTCGTGGGGGCCTAGAGGTCGATGTTAGCAAATTGATCTGGACTCCATACAGAGAACAGGGTTGA 1710 46.96 MPRVTYPARKLSPRTSDMADGEEQQGECWGGSTGASGFDLGNKSFGIADVRSTSIVIVQSKIFRSISHCVYEKLGRGGKERVAAVKVFISFNACQEQDEAQASAAYDGFRALPLHTKPQAAMGSIDVQSTNAENGSAAASADGRQKPVPADGLNQTSNEPDGTAPEKPKELGPTKKRMSSMLPLDVGTRVMCRWRDGKYHPVKVIERRKLQATGFSDYEYYVHYTEFNRRLDEWVKLDQLDLDSVETVVDEKVEDKVTGLKMTRHQKRKIDETHVEGHEELDAASLREHEEFTKVKNIATIELGRYEIETWYFSPFPPEYNDTTKLYFCEFCLNFMKRKEQLQRHMRKCDLKHPPGDEIYRCGTLSMFEVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLFLFYVLCECDDRGCHMVGYFSKEKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKEGKVGTPERPLSDLGLVSYRGYWTRVLLDILKKHKANISIKELSDMTAIKAEDILNTLQSLELIQYRKGQHVICADPKVLDRHLKAAGRGGLEVDVSKLIWTPYREQG 569
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 11779809 11789968 - CcPI632755_03g009250.1 Cco03g0925 174284
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cco03g0925 569 MobiDBLite consensus disorder prediction 1 26 - -
Cco03g0925 569 SUPERFAMILY Chromo domain-like 175 294 IPR016197 -
Cco03g0925 569 ProSiteProfiles MYST-type histone acetyltransferase (HAT) domain profile. 293 564 IPR002717 GO:0004402(InterPro)|GO:0006355(InterPro)
Cco03g0925 569 FunFam Histone acetyltransferase 352 479 - -
Cco03g0925 569 FunFam Histone acetyltransferase 472 551 - -
Cco03g0925 569 Gene3D - 174 293 - -
Cco03g0925 569 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 294 565 IPR016181 -
Cco03g0925 569 Gene3D - 352 564 - -
Cco03g0925 569 Pfam RNA binding activity-knot of a chromodomain 184 242 IPR025995 -
Cco03g0925 569 Gene3D - 472 552 IPR036388 -
Cco03g0925 569 SMART chromo_7 198 257 IPR000953 -
Cco03g0925 569 Gene3D - 294 350 - -
Cco03g0925 569 Pfam MOZ/SAS family 354 531 IPR002717 GO:0004402(InterPro)|GO:0006355(InterPro)
Cco03g0925 569 MobiDBLite consensus disorder prediction 131 180 - -
Cco03g0925 569 Pfam MYST family zinc finger domain 295 349 IPR040706 -
Cco03g0925 569 CDD CBD_MOF_like 187 256 - -
Cco03g0925 569 FunFam Histone acetyltransferase 292 349 - -
Cco03g0925 569 CDD NAT_SF 405 463 - -
Cco03g0925 569 PANTHER HISTONE ACETYLTRANSFERASE 146 565 IPR050603 GO:0000790(PANTHER)|GO:0003712(PANTHER)|GO:0045892(PANTHER)|GO:0045944(PANTHER)
Cco03g0925 569 FunFam Histone acetyltransferase 174 293 - -
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco03g0925 K11308 - csv:101217824 898.656